RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 CYP2E1P05181 493 aaPredicted RBP6.01□□□□□ -1.45
CAPN3-211ENST00000562199 PCNAP12004 261 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 HSD3B1P14060 373 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 MZF1P28698 734 aaPredicted RBP6.01□□□□□ -1.45
CAPN3-211ENST00000562199 NOS3P29474 1203 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 SOX5P35711 763 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 HADHAP40939 763 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 TMPOP42166 694 aaKnown RBP6.01□□□□□ -1.45
CAPN3-211ENST00000562199 STAT1P42224 750 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 ATP5OP48047 213 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 SIK1P57059 783 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 IFIT5Q13325 482 aaKnown RBP6.01□□□□□ -1.45
CAPN3-211ENST00000562199 SMAD4Q13485 552 aaKnown RBP6.01□□□□□ -1.45
CAPN3-211ENST00000562199 PPA1Q15181 289 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 BBS9Q3SYG4 887 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 SUPT20HL1Q3ZLR7 823 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 C2orf27AQ580R0 203 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 KRBOX4Q5JUW0 171 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 ARTNQ5T4W7 220 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 NAA16Q6N069 864 aaPredicted RBP6.01□□□□□ -1.45
CAPN3-211ENST00000562199 CXorf57Q6NSI4 855 aaKnown RBP6.01□□□□□ -1.45
CAPN3-211ENST00000562199 CORO6Q6QEF8 472 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 B4GALNT4Q76KP1 1039 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 TAOK1Q7L7X3 1001 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 HS2ST1Q7LGA3 356 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 ZNF804AQ7Z570 1209 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 RNF180Q86T96 592 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 ZBTB46Q86UZ6 589 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 VSIG1Q86XK7 387 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 COLGALT2Q8IYK4 626 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 ZNF483Q8TF39 744 aaPredicted RBP6.01□□□□□ -1.45
CAPN3-211ENST00000562199 KCTD13Q8WZ19 329 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 COL26A1Q96A83 441 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 MIEF2Q96C03 454 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 CRELD1Q96HD1 420 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 SEC16BQ96JE7 1060 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 JAKMIP1Q96N16 626 aaKnown RBP6.01□□□□□ -1.45
CAPN3-211ENST00000562199 SAMD11Q96NU1 681 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 NSUN5Q96P11 429 aaKnown RBP6.01□□□□□ -1.45
CAPN3-211ENST00000562199 RMDN3Q96TC7 470 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 GPATCH1Q9BRR8 931 aaKnown RBP6.01□□□□□ -1.45
CAPN3-211ENST00000562199 ZPBPQ9BS86 351 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 LSM14BQ9BX40 385 aaKnown RBP6.01□□□□□ -1.45
CAPN3-211ENST00000562199 NACAP1Q9BZK3 213 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 SAP130Q9H0E3 1048 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 SLC12A5Q9H2X9 1139 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 ATP13A1Q9HD20 1204 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 ABCB6Q9NP58 842 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 DDX18Q9NVP1 670 aaKnown RBP6.01□□□□□ -1.45
CAPN3-211ENST00000562199 AATFQ9NY61 560 aaKnown RBP eCLIP6.01□□□□□ -1.45
CAPN3-211ENST00000562199 CXXC1Q9P0U4 656 aaPredicted RBP6.01□□□□□ -1.45
CAPN3-211ENST00000562199 GJD2Q9UKL4 321 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 EDARQ9UNE0 448 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 DAGLAQ9Y4D2 1042 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 A0A1W2PP64 1363 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 KIF24Q5T7B8 1368 aa6.01□□□□□ -1.45
CAPN3-211ENST00000562199 KNDC1Q76NI1 1749 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 GIMAP1-GIMAP5A0A087WTJ2 511 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 GPR75-ASB3A0A0A6YYF3 556 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 A0A1B0GUL7 405 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 CCDC69A6NI79 296 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 BIN1O00499 593 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 ERC2O15083 957 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 RNF113AO15541 343 aaKnown RBP6□□□□□ -1.45
CAPN3-211ENST00000562199 FRS3O43559 492 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 TLR5O60602 858 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 DEAF1O75398 565 aaPredicted RBP6□□□□□ -1.45
CAPN3-211ENST00000562199 ZNF189O75820 626 aaPredicted RBP6□□□□□ -1.45
CAPN3-211ENST00000562199 FAM13AO94988 1023 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 PSAPP07602 524 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 VIMP08670 466 aaKnown RBP6□□□□□ -1.45
CAPN3-211ENST00000562199 RHOXF2BP0C7M4 288 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 TOP1P11387 765 aaKnown RBP6□□□□□ -1.45
CAPN3-211ENST00000562199 ENDOUP21128 410 aaKnown RBP6□□□□□ -1.45
CAPN3-211ENST00000562199 MSNP26038 577 aaKnown RBP6□□□□□ -1.45
CAPN3-211ENST00000562199 RPL13P26373 211 aaKnown RBP6□□□□□ -1.45
CAPN3-211ENST00000562199 ELF1P32519 619 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 ZAP70P43403 619 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 NRLP54845 237 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 CBX1P83916 185 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 IL1RL1Q01638 556 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 PLCB3Q01970 1234 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 ZBTB16Q05516 673 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 RUNX1T1Q06455 604 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 EHHADHQ08426 723 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 AP1B1Q10567 949 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 KIF5AQ12840 1032 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 IFRD2Q12894 506 aaPredicted RBP6□□□□□ -1.45
CAPN3-211ENST00000562199 TUBA3CQ13748 450 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 LAMB3Q13751 1172 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 SCARB2Q14108 478 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 TRIM14Q14142 442 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 OCLNQ16625 522 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 GEN1Q17RS7 908 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 CCDC14Q49A88 953 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 KRTCAP3Q53RY4 240 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 CCDC183Q5T5S1 534 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 OTUD7BQ6GQQ9 843 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 PLEKHM3Q6ZWE6 761 aa6□□□□□ -1.45
CAPN3-211ENST00000562199 IKBIPQ70UQ0 350 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms