RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 GCFC2P16383 781 aaKnown RBP9.41□□□□□ -0.9
PALB2-202ENST00000561514 HOXA11P31270 313 aaPredicted RBP9.41□□□□□ -0.9
PALB2-202ENST00000561514 RFC5P40937 340 aa9.41□□□□□ -0.9
PALB2-202ENST00000561514 QARSP47897 775 aaKnown RBP9.41□□□□□ -0.9
PALB2-202ENST00000561514 SLC11A1P49279 550 aa9.41□□□□□ -0.9
PALB2-202ENST00000561514 CCT2P78371 535 aaKnown RBP9.41□□□□□ -0.9
PALB2-202ENST00000561514 SSRP1Q08945 709 aaKnown RBP9.41□□□□□ -0.9
PALB2-202ENST00000561514 SPIRE1Q08AE8 756 aa9.41□□□□□ -0.9
PALB2-202ENST00000561514 BMS1Q14692 1282 aaKnown RBP9.41□□□□□ -0.9
PALB2-202ENST00000561514 NONOQ15233 471 aaKnown RBP eCLIP9.41□□□□□ -0.9
PALB2-202ENST00000561514 PCBP1Q15365 356 aaKnown RBP eCLIP9.41□□□□□ -0.9
PALB2-202ENST00000561514 UBXN11Q5T124 520 aa9.41□□□□□ -0.9
PALB2-202ENST00000561514 TWF2Q6IBS0 349 aaKnown RBP9.41□□□□□ -0.9
PALB2-202ENST00000561514 SRGAP1Q7Z6B7 1085 aa9.41□□□□□ -0.9
PALB2-202ENST00000561514 PPFIBP1Q86W92 1011 aa9.41□□□□□ -0.9
PALB2-202ENST00000561514 EXOC8Q8IYI6 725 aa9.41□□□□□ -0.9
PALB2-202ENST00000561514 RNF168Q8IYW5 571 aaPredicted RBP9.41□□□□□ -0.9
PALB2-202ENST00000561514 RNF169Q8NCN4 708 aa9.41□□□□□ -0.9
PALB2-202ENST00000561514 CMASQ8NFW8 434 aaPredicted RBP9.41□□□□□ -0.9
PALB2-202ENST00000561514 LPPQ93052 612 aa9.41□□□□□ -0.9
PALB2-202ENST00000561514 FAM20AQ96MK3 541 aa9.41□□□□□ -0.9
PALB2-202ENST00000561514 TMEM175Q9BSA9 504 aa9.41□□□□□ -0.9
PALB2-202ENST00000561514 PHF20Q9BVI0 1012 aa9.41□□□□□ -0.9
PALB2-202ENST00000561514 APOL5Q9BWW9 433 aa9.41□□□□□ -0.9
PALB2-202ENST00000561514 WRAP73Q9P2S5 460 aaPredicted RBP9.41□□□□□ -0.9
PALB2-202ENST00000561514 DDX25Q9UHL0 483 aaKnown RBP9.41□□□□□ -0.9
PALB2-202ENST00000561514 COL4A3BPQ9Y5P4 624 aa9.41□□□□□ -0.9
PALB2-202ENST00000561514 ZMYM2Q9UBW7 1377 aa9.4□□□□□ -0.9
PALB2-202ENST00000561514 GAS2O43903 313 aaKnown RBP9.4□□□□□ -0.9
PALB2-202ENST00000561514 DKC1O60832 514 aaKnown RBP eCLIP9.4□□□□□ -0.9
PALB2-202ENST00000561514 C1RP00736 705 aa9.4□□□□□ -0.9
PALB2-202ENST00000561514 P4HBP07237 508 aaKnown RBP9.4□□□□□ -0.9
PALB2-202ENST00000561514 EPCAMP16422 314 aa9.4□□□□□ -0.9
PALB2-202ENST00000561514 FXR2P51116 673 aaKnown RBP eCLIP9.4□□□□□ -0.9
PALB2-202ENST00000561514 POU5F1BQ06416 359 aa9.4□□□□□ -0.9
PALB2-202ENST00000561514 DSC1Q08554 894 aa9.4□□□□□ -0.9
PALB2-202ENST00000561514 L1TD1Q5T7N2 865 aaKnown RBP9.4□□□□□ -0.9
PALB2-202ENST00000561514 C15orf39Q6ZRI6 1047 aa9.4□□□□□ -0.9
PALB2-202ENST00000561514 CATSPER4Q7RTX7 472 aa9.4□□□□□ -0.9
PALB2-202ENST00000561514 GPR149Q86SP6 731 aa9.4□□□□□ -0.9
PALB2-202ENST00000561514 RHPN2Q8IUC4 686 aa9.4□□□□□ -0.9
PALB2-202ENST00000561514 KSR1Q8IVT5 923 aa9.4□□□□□ -0.9
PALB2-202ENST00000561514 C4orf19Q8IY42 314 aa9.4□□□□□ -0.9
PALB2-202ENST00000561514 GPR65Q8IYL9 337 aa9.4□□□□□ -0.9
PALB2-202ENST00000561514 TDRD5Q8NAT2 981 aaKnown RBP9.4□□□□□ -0.9
PALB2-202ENST00000561514 SLC7A3Q8WY07 619 aa9.4□□□□□ -0.9
PALB2-202ENST00000561514 HAS1Q92839 578 aa9.4□□□□□ -0.9
PALB2-202ENST00000561514 PGBD4Q96DM1 585 aa9.4□□□□□ -0.9
PALB2-202ENST00000561514 CCDC51Q96ER9 411 aa9.4□□□□□ -0.9
PALB2-202ENST00000561514 AIFM3Q96NN9 605 aa9.4□□□□□ -0.9
PALB2-202ENST00000561514 SH2D3AQ9BRG2 576 aa9.4□□□□□ -0.9
PALB2-202ENST00000561514 MINDY3Q9H8M7 445 aa9.4□□□□□ -0.9
PALB2-202ENST00000561514 SFXN1Q9H9B4 322 aa9.4□□□□□ -0.9
PALB2-202ENST00000561514 DNAJB4Q9UDY4 337 aa9.4□□□□□ -0.9
PALB2-202ENST00000561514 PCDHB2Q9Y5E7 798 aa9.4□□□□□ -0.9
PALB2-202ENST00000561514 EVPLQ92817 2033 aa9.39□□□□□ -0.91
PALB2-202ENST00000561514 CFAP54Q96N23 3096 aa9.39□□□□□ -0.91
PALB2-202ENST00000561514 DDX11L8A8MPP1 907 aa9.39□□□□□ -0.91
PALB2-202ENST00000561514 ASAP2O43150 1006 aa9.39□□□□□ -0.91
PALB2-202ENST00000561514 LYPLA2O95372 231 aa9.39□□□□□ -0.91
PALB2-202ENST00000561514 NBL1P41271 181 aa9.39□□□□□ -0.91
PALB2-202ENST00000561514 CLCN4P51793 760 aa9.39□□□□□ -0.91
PALB2-202ENST00000561514 AFF1P51825 1210 aaKnown RBP9.39□□□□□ -0.91
PALB2-202ENST00000561514 NPEPPSP55786 919 aa9.39□□□□□ -0.91
PALB2-202ENST00000561514 EPHA7Q15375 998 aa9.39□□□□□ -0.91
PALB2-202ENST00000561514 INF2Q27J81 1249 aa9.39□□□□□ -0.91
PALB2-202ENST00000561514 ATAT1Q5SQI0 421 aa9.39□□□□□ -0.91
PALB2-202ENST00000561514 RARS2Q5T160 578 aaKnown RBP9.39□□□□□ -0.91
PALB2-202ENST00000561514 PLA2G4FQ68DD2 849 aa9.39□□□□□ -0.91
PALB2-202ENST00000561514 CYP26C1Q6V0L0 522 aa9.39□□□□□ -0.91
PALB2-202ENST00000561514 ZNF280BQ86YH2 543 aa9.39□□□□□ -0.91
PALB2-202ENST00000561514 C12orf76Q8N812 135 aaPredicted RBP9.39□□□□□ -0.91
PALB2-202ENST00000561514 TMEM105Q8N8V8 129 aa9.39□□□□□ -0.91
PALB2-202ENST00000561514 ZNF579Q8NAF0 562 aaKnown RBP9.39□□□□□ -0.91
PALB2-202ENST00000561514 CNNM3Q8NE01 707 aa9.39□□□□□ -0.91
PALB2-202ENST00000561514 PRPF31Q8WWY3 499 aaKnown RBP9.39□□□□□ -0.91
PALB2-202ENST00000561514 PSPC1Q8WXF1 523 aaKnown RBP9.39□□□□□ -0.91
PALB2-202ENST00000561514 AUTS2Q8WXX7 1259 aa9.39□□□□□ -0.91
PALB2-202ENST00000561514 NLRP4Q96MN2 994 aa9.39□□□□□ -0.91
PALB2-202ENST00000561514 KLHL5Q96PQ7 755 aa9.39□□□□□ -0.91
PALB2-202ENST00000561514 RSAD1Q9HA92 442 aa9.39□□□□□ -0.91
PALB2-202ENST00000561514 XPNPEP1Q9NQW7 623 aa9.39□□□□□ -0.91
PALB2-202ENST00000561514 MARCH5Q9NX47 278 aa9.39□□□□□ -0.91
PALB2-202ENST00000561514 KANSL3Q9P2N6 904 aa9.39□□□□□ -0.91
PALB2-202ENST00000561514 CYP46A1Q9Y6A2 500 aa9.39□□□□□ -0.91
PALB2-202ENST00000561514 ZNF292O60281 2723 aa9.38□□□□□ -0.91
PALB2-202ENST00000561514 CPLX1O14810 134 aa9.38□□□□□ -0.91
PALB2-202ENST00000561514 DDHD2O94830 711 aa9.38□□□□□ -0.91
PALB2-202ENST00000561514 SOD2P04179 222 aa9.38□□□□□ -0.91
PALB2-202ENST00000561514 CNPP09543 421 aaKnown RBP9.38□□□□□ -0.91
PALB2-202ENST00000561514 SP100P23497 879 aaPredicted RBP9.38□□□□□ -0.91
PALB2-202ENST00000561514 AXLP30530 894 aa9.38□□□□□ -0.91
PALB2-202ENST00000561514 CLCN5P51795 746 aa9.38□□□□□ -0.91
PALB2-202ENST00000561514 LAMTOR4Q0VGL1 99 aa9.38□□□□□ -0.91
PALB2-202ENST00000561514 EMC2Q15006 297 aa9.38□□□□□ -0.91
PALB2-202ENST00000561514 AMHR2Q16671 573 aa9.38□□□□□ -0.91
PALB2-202ENST00000561514 LETM2Q2VYF4 491 aa9.38□□□□□ -0.91
PALB2-202ENST00000561514 CWF19L1Q69YN2 538 aaKnown RBP9.38□□□□□ -0.91
PALB2-202ENST00000561514 ASTLQ6HA08 431 aaPredicted RBP9.38□□□□□ -0.91
PALB2-202ENST00000561514 CPLX2Q6PUV4 134 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms