RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	EID1	Q9Y6B2	187 aa		5.18	□□□□□ -1.58
LRRC28-222	ENST00000561431	CHD2	O14647	1828 aa	Known RBP	5.18	□□□□□ -1.58
LRRC28-222	ENST00000561431	IFT172	Q9UG01	1749 aa		5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	PPL	O60437	1756 aa		5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	SETD5	Q9C0A6	1442 aa		5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	LCHN	A4D1U4	455 aa		5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	ZNF839	A8K0R7	811 aa		5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	ALDH1L1	O75891	902 aa		5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	MT-CO1	P00395	513 aa		5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	ATF2	P15336	505 aa		5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	MCC	P23508	829 aa		5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	LIMS1	P48059	325 aa		5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	FOXO4	P98177	505 aa		5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	PUM1	Q14671	1186 aa	Known RBP eCLIP	5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	PTPN21	Q16825	1174 aa		5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	ABCB5	Q2M3G0	1257 aa		5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	PHF19	Q5T6S3	580 aa		5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	DPP8	Q6V1X1	898 aa	Predicted RBP	5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	LIPI	Q6XZB0	460 aa		5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	TTLL7	Q6ZT98	887 aa		5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	ZBTB46	Q86UZ6	589 aa		5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	PNMA8A	Q86V59	439 aa	Predicted RBP	5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	SMC5	Q8IY18	1101 aa		5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	TGFBRAP1	Q8WUH2	860 aa		5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	RPGR	Q92834	1020 aa	Known RBP	5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	ZBTB8A	Q96BR9	441 aa		5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	C16orf92	Q96LL3	132 aa		5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	MYL10	Q9BUA6	226 aa		5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	MENT	Q9BUN1	341 aa		5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	TRIM8	Q9BZR9	551 aa		5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	DLL4	Q9NR61	685 aa		5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	MKS1	Q9NXB0	559 aa		5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	GALNT8	Q9NY28	637 aa		5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	TERF2IP	Q9NYB0	399 aa		5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	LAS1L	Q9Y4W2	734 aa	Known RBP	5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	PCDHA5	Q9Y5H7	936 aa		5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	MRFAP1	Q9Y605	127 aa		5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	KIF1B	O60333	1816 aa		5.17	□□□□□ -1.58
LRRC28-222	ENST00000561431	RAB3GAP2	Q9H2M9	1393 aa		5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	SPATA31E1	Q6ZUB1	1445 aa		5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	PTPRU	Q92729	1446 aa		5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	CYP7B1	O75881	506 aa		5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	PRPF6	O94906	941 aa	Known RBP	5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	CFB	P00751	764 aa		5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	CT47B1	P0C2W7	299 aa	Predicted RBP	5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	ECE1	P42892	770 aa		5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	PLP2	Q04941	152 aa		5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	KRTAP1-1	Q07627	177 aa		5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	ADCY2	Q08462	1091 aa		5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	KLF1	Q13351	362 aa	Predicted RBP	5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	SMAD4	Q13485	552 aa	Known RBP	5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	ACAP2	Q15057	778 aa		5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	RALBP1	Q15311	655 aa		5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	WDR72	Q3MJ13	1102 aa		5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	CCDC62	Q6P9F0	684 aa		5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	CNPY4	Q8N129	248 aa		5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	TMTC2	Q8N394	836 aa		5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	TTLL6	Q8N841	843 aa		5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	ZNF496	Q96IT1	587 aa	Predicted RBP	5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	MAML3	Q96JK9	1138 aa		5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	ACAP3	Q96P50	834 aa		5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	WRNIP1	Q96S55	665 aa		5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	SYT3	Q9BQG1	590 aa		5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	TACO1	Q9BSH4	297 aa	Known RBP	5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	ASPSCR1	Q9BZE9	553 aa		5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	LUC7L	Q9NQ29	371 aa	Known RBP	5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	BTBD7	Q9P203	1132 aa		5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	KLHL42	Q9P2K6	505 aa		5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	ZFP69B	Q9UJL9	534 aa		5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	PMF1-BGLAP	U3KQ54	211 aa		5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	IRS2	Q9Y4H2	1338 aa		5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	TMEM94	Q12767	1356 aa		5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	PIK3R4	Q99570	1358 aa		5.16	□□□□□ -1.58
LRRC28-222	ENST00000561431	SHTN1	A0MZ66	631 aa		5.15	□□□□□ -1.59
LRRC28-222	ENST00000561431	XPOT	O43592	962 aa	Known RBP	5.15	□□□□□ -1.59
LRRC28-222	ENST00000561431	CLEC2L	P0C7M8	214 aa		5.15	□□□□□ -1.59
LRRC28-222	ENST00000561431	FBLN1	P23142	703 aa		5.15	□□□□□ -1.59
LRRC28-222	ENST00000561431	IARS	P41252	1262 aa	Known RBP	5.15	□□□□□ -1.59
LRRC28-222	ENST00000561431	RGS3	P49796	1198 aa		5.15	□□□□□ -1.59
LRRC28-222	ENST00000561431	TTF1	Q15361	905 aa	Predicted RBP	5.15	□□□□□ -1.59
LRRC28-222	ENST00000561431	UGT8	Q16880	541 aa		5.15	□□□□□ -1.59
LRRC28-222	ENST00000561431	LRSAM1	Q6UWE0	723 aa		5.15	□□□□□ -1.59
LRRC28-222	ENST00000561431	FRMD5	Q7Z6J6	570 aa		5.15	□□□□□ -1.59
LRRC28-222	ENST00000561431	RTN4RL1	Q86UN2	441 aa	Predicted RBP	5.15	□□□□□ -1.59
LRRC28-222	ENST00000561431	IGDCC3	Q8IVU1	814 aa		5.15	□□□□□ -1.59
LRRC28-222	ENST00000561431	CMIP	Q8IY22	773 aa		5.15	□□□□□ -1.59
LRRC28-222	ENST00000561431	NME8	Q8N427	588 aa		5.15	□□□□□ -1.59
LRRC28-222	ENST00000561431	STPG3	Q8N7X2	389 aa		5.15	□□□□□ -1.59
LRRC28-222	ENST00000561431	DTX3	Q8N9I9	347 aa		5.15	□□□□□ -1.59
LRRC28-222	ENST00000561431	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	5.15	□□□□□ -1.59
LRRC28-222	ENST00000561431	MPHOSPH9	Q99550	1183 aa		5.15	□□□□□ -1.59
LRRC28-222	ENST00000561431	FOXB1	Q99853	325 aa		5.15	□□□□□ -1.59
LRRC28-222	ENST00000561431	GORASP1	Q9BQQ3	440 aa		5.15	□□□□□ -1.59
LRRC28-222	ENST00000561431	C11orf84	Q9BUA3	381 aa	Predicted RBP	5.15	□□□□□ -1.59
LRRC28-222	ENST00000561431	BDH2	Q9BUT1	245 aa		5.15	□□□□□ -1.59
LRRC28-222	ENST00000561431	DNAJC28	Q9NX36	388 aa		5.15	□□□□□ -1.59
LRRC28-222	ENST00000561431	HSPBP1	Q9NZL4	362 aa		5.15	□□□□□ -1.59
LRRC28-222	ENST00000561431	EDAR	Q9UNE0	448 aa		5.15	□□□□□ -1.59
LRRC28-222	ENST00000561431	MYRF	Q9Y2G1	1151 aa		5.15	□□□□□ -1.59
LRRC28-222	ENST00000561431	SPEF1	Q9Y4P9	236 aa		5.15	□□□□□ -1.59

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