RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 PCDHB6Q9Y5E3 794 aa19.11■□□□□ 0.65
CDC42BPB-208ENST00000561271 VWA8A3KMH1 1905 aa19.1■□□□□ 0.65
CDC42BPB-208ENST00000561271 OFD1O75665 1012 aa19.1■□□□□ 0.65
CDC42BPB-208ENST00000561271 RPA1P27694 616 aa19.1■□□□□ 0.65
CDC42BPB-208ENST00000561271 SMAD4Q13485 552 aaKnown RBP19.1■□□□□ 0.65
CDC42BPB-208ENST00000561271 DUSP6Q16828 381 aa19.1■□□□□ 0.65
CDC42BPB-208ENST00000561271 IFNLR1Q8IU57 520 aaPredicted RBP19.1■□□□□ 0.65
CDC42BPB-208ENST00000561271 C4orf32Q8N8J7 132 aa19.1■□□□□ 0.65
CDC42BPB-208ENST00000561271 VN1R2Q8NFZ6 395 aa19.1■□□□□ 0.65
CDC42BPB-208ENST00000561271 PGBD4Q96DM1 585 aa19.1■□□□□ 0.65
CDC42BPB-208ENST00000561271 MSLNLQ96KJ4 702 aa19.1■□□□□ 0.65
CDC42BPB-208ENST00000561271 EIF2AQ9BY44 585 aaKnown RBP19.1■□□□□ 0.65
CDC42BPB-208ENST00000561271 GBP3Q9H0R5 595 aa19.1■□□□□ 0.65
CDC42BPB-208ENST00000561271 RSAD1Q9HA92 442 aa19.1■□□□□ 0.65
CDC42BPB-208ENST00000561271 PUF60Q9UHX1 559 aaKnown RBP19.1■□□□□ 0.65
CDC42BPB-208ENST00000561271 DBR1Q9UK59 544 aaKnown RBP19.1■□□□□ 0.65
CDC42BPB-208ENST00000561271 KIF3AQ9Y496 699 aa19.1■□□□□ 0.65
CDC42BPB-208ENST00000561271 LRRIQ4A6NIV6 560 aa19.09■□□□□ 0.65
CDC42BPB-208ENST00000561271 HIDE1A8MVS5 230 aa19.09■□□□□ 0.65
CDC42BPB-208ENST00000561271 B4GALT5O43286 388 aa19.09■□□□□ 0.65
CDC42BPB-208ENST00000561271 XRCC6P12956 609 aaKnown RBP eCLIP19.09■□□□□ 0.65
CDC42BPB-208ENST00000561271 GJB2P29033 226 aa19.09■□□□□ 0.65
CDC42BPB-208ENST00000561271 CCT6AP40227 531 aaKnown RBP19.09■□□□□ 0.65
CDC42BPB-208ENST00000561271 ALDH7A1P49419 539 aaKnown RBP19.09■□□□□ 0.65
CDC42BPB-208ENST00000561271 FXR2P51116 673 aaKnown RBP eCLIP19.09■□□□□ 0.655e-6■■□□□ 12.9
CDC42BPB-208ENST00000561271 AFF1P51825 1210 aaKnown RBP19.09■□□□□ 0.65
CDC42BPB-208ENST00000561271 KRT17Q04695 432 aa19.09■□□□□ 0.65
CDC42BPB-208ENST00000561271 RNASELQ05823 741 aaKnown RBP19.09■□□□□ 0.65
CDC42BPB-208ENST00000561271 ZP2Q05996 745 aa19.09■□□□□ 0.65
CDC42BPB-208ENST00000561271 PTGDRQ13258 359 aa19.09■□□□□ 0.65
CDC42BPB-208ENST00000561271 AMHR2Q16671 573 aa19.09■□□□□ 0.65
CDC42BPB-208ENST00000561271 HAUS3Q68CZ6 603 aa19.09■□□□□ 0.65
CDC42BPB-208ENST00000561271 MCTP1Q6DN14 999 aa19.09■□□□□ 0.65
CDC42BPB-208ENST00000561271 PDE12Q6L8Q7 609 aaKnown RBP19.09■□□□□ 0.65
CDC42BPB-208ENST00000561271 NOTUMQ6P988 496 aa19.09■□□□□ 0.65
CDC42BPB-208ENST00000561271 GJD3Q8N144 294 aa19.09■□□□□ 0.65
CDC42BPB-208ENST00000561271 SMG8Q8ND04 991 aaKnown RBP19.09■□□□□ 0.65
CDC42BPB-208ENST00000561271 URGCPQ8TCY9 931 aa19.09■□□□□ 0.65
CDC42BPB-208ENST00000561271 TMEM169Q96HH4 297 aa19.09■□□□□ 0.65
CDC42BPB-208ENST00000561271 NACC1Q96RE7 527 aa19.09■□□□□ 0.65
CDC42BPB-208ENST00000561271 EPHX3Q9H6B9 360 aa19.09■□□□□ 0.65
CDC42BPB-208ENST00000561271 NRDE2Q9H7Z3 1164 aa19.09■□□□□ 0.65
CDC42BPB-208ENST00000561271 DNAJB4Q9UDY4 337 aa19.09■□□□□ 0.65
CDC42BPB-208ENST00000561271 CNTNAP2Q9UHC6 1331 aa19.08■□□□□ 0.65
CDC42BPB-208ENST00000561271 ARHGEF35A5YM69 484 aa19.08■□□□□ 0.64
CDC42BPB-208ENST00000561271 ARF4P18085 180 aaPredicted RBP19.08■□□□□ 0.64
CDC42BPB-208ENST00000561271 SMAD2Q15796 467 aaKnown RBP19.08■□□□□ 0.64
CDC42BPB-208ENST00000561271 ECM1Q16610 540 aa19.08■□□□□ 0.64
CDC42BPB-208ENST00000561271 PADI6Q6TGC4 694 aa19.08■□□□□ 0.64
CDC42BPB-208ENST00000561271 TMC7Q7Z402 723 aa19.08■□□□□ 0.64
CDC42BPB-208ENST00000561271 MRPL10Q7Z7H8 261 aaKnown RBP19.08■□□□□ 0.64
CDC42BPB-208ENST00000561271 MCPH1Q8NEM0 835 aa19.08■□□□□ 0.64
CDC42BPB-208ENST00000561271 BCL7CQ8WUZ0 217 aaPredicted RBP19.08■□□□□ 0.64
CDC42BPB-208ENST00000561271 RSPH1Q8WYR4 309 aa19.08■□□□□ 0.64
CDC42BPB-208ENST00000561271 LRWD1Q9UFC0 647 aa19.08■□□□□ 0.64
CDC42BPB-208ENST00000561271 IPPQ9Y573 584 aa19.08■□□□□ 0.64
CDC42BPB-208ENST00000561271 TRIOO75962 3097 aa19.07■□□□□ 0.64
CDC42BPB-208ENST00000561271 NCLP19338 710 aaKnown RBP19.07■□□□□ 0.64
CDC42BPB-208ENST00000561271 AXLP30530 894 aa19.07■□□□□ 0.64
CDC42BPB-208ENST00000561271 CA8P35219 290 aa19.07■□□□□ 0.64
CDC42BPB-208ENST00000561271 POU5F1BQ06416 359 aa19.07■□□□□ 0.64
CDC42BPB-208ENST00000561271 PCBP1Q15365 356 aaKnown RBP eCLIP19.07■□□□□ 0.64
CDC42BPB-208ENST00000561271 LLGL2Q6P1M3 1020 aa19.07■□□□□ 0.64
CDC42BPB-208ENST00000561271 CDR2LQ86X02 465 aaPredicted RBP19.07■□□□□ 0.64
CDC42BPB-208ENST00000561271 ZNF280BQ86YH2 543 aa19.07■□□□□ 0.64
CDC42BPB-208ENST00000561271 SMRP1Q8NCR6 262 aa19.07■□□□□ 0.64
CDC42BPB-208ENST00000561271 SNX29Q8TEQ0 813 aa19.07■□□□□ 0.64
CDC42BPB-208ENST00000561271 BSNDQ8WZ55 320 aa19.07■□□□□ 0.64
CDC42BPB-208ENST00000561271 CCDC51Q96ER9 411 aa19.07■□□□□ 0.64
CDC42BPB-208ENST00000561271 CDCA3Q99618 268 aaPredicted RBP19.07■□□□□ 0.64
CDC42BPB-208ENST00000561271 APOL6Q9BWW8 343 aa19.07■□□□□ 0.64
CDC42BPB-208ENST00000561271 NFKBIZQ9BYH8 718 aa19.07■□□□□ 0.64
CDC42BPB-208ENST00000561271 NXF3Q9H4D5 531 aaKnown RBP19.07■□□□□ 0.64
CDC42BPB-208ENST00000561271 NGRNQ9NPE2 291 aaKnown RBP19.07■□□□□ 0.64
CDC42BPB-208ENST00000561271 HES2Q9Y543 173 aa19.07■□□□□ 0.64
CDC42BPB-208ENST00000561271 PP2D1A8MPX8 630 aa19.06■□□□□ 0.64
CDC42BPB-208ENST00000561271 POMCP01189 267 aa19.06■□□□□ 0.64
CDC42BPB-208ENST00000561271 GALTP07902 379 aa19.06■□□□□ 0.64
CDC42BPB-208ENST00000561271 ITGA4P13612 1032 aa19.06■□□□□ 0.64
CDC42BPB-208ENST00000561271 MLH1P40692 756 aa19.06■□□□□ 0.64
CDC42BPB-208ENST00000561271 SLC11A1P49279 550 aa19.06■□□□□ 0.64
CDC42BPB-208ENST00000561271 COASYQ13057 564 aa19.06■□□□□ 0.64
CDC42BPB-208ENST00000561271 SMC1AQ14683 1233 aaKnown RBP19.06■□□□□ 0.64
CDC42BPB-208ENST00000561271 ADHFE1Q8IWW8 467 aa19.06■□□□□ 0.64
CDC42BPB-208ENST00000561271 IGSF21Q96ID5 467 aa19.06■□□□□ 0.64
CDC42BPB-208ENST00000561271 CSRNP2Q9H175 543 aa19.06■□□□□ 0.64
CDC42BPB-208ENST00000561271 RNF39Q9H2S5 420 aa19.06■□□□□ 0.64
CDC42BPB-208ENST00000561271 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.06■□□□□ 0.64
CDC42BPB-208ENST00000561271 PRKAG3Q9UGI9 489 aa19.06■□□□□ 0.64
CDC42BPB-208ENST00000561271 DOCK6Q96HP0 2047 aa19.05■□□□□ 0.64
CDC42BPB-208ENST00000561271 FSD2A1L4K1 749 aa19.05■□□□□ 0.64
CDC42BPB-208ENST00000561271 H3BQV1 296 aa19.05■□□□□ 0.64
CDC42BPB-208ENST00000561271 DDHD2O94830 711 aa19.05■□□□□ 0.64
CDC42BPB-208ENST00000561271 EYA4O95677 639 aa19.05■□□□□ 0.64
CDC42BPB-208ENST00000561271 MCM2P49736 904 aa19.05■□□□□ 0.64
CDC42BPB-208ENST00000561271 NCBP1Q09161 790 aaKnown RBP19.05■□□□□ 0.64
CDC42BPB-208ENST00000561271 IL17AQ16552 155 aa19.05■□□□□ 0.64
CDC42BPB-208ENST00000561271 CDCA2Q69YH5 1023 aaPredicted RBP19.05■□□□□ 0.64
CDC42BPB-208ENST00000561271 IGSF22Q8N9C0 903 aa19.05■□□□□ 0.64
CDC42BPB-208ENST00000561271 CNNM3Q8NE01 707 aa19.05■□□□□ 0.64
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