RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 URGCPQ8TCY9 931 aa30.18■■■□□ 2.42
SNRPA1-215ENST00000561187 PGBD4Q96DM1 585 aa30.18■■■□□ 2.42
SNRPA1-215ENST00000561187 MFSD14AQ96MC6 490 aa30.18■■■□□ 2.42
SNRPA1-215ENST00000561187 EIF2AK1Q9BQI3 630 aaKnown RBP30.18■■■□□ 2.42
SNRPA1-215ENST00000561187 RSAD1Q9HA92 442 aa30.18■■■□□ 2.42
SNRPA1-215ENST00000561187 A0A087WWV3 80 aa30.17■■■□□ 2.42
SNRPA1-215ENST00000561187 BTBD18B2RXH4 712 aa30.17■■■□□ 2.42
SNRPA1-215ENST00000561187 EPCAMP16422 314 aa30.17■■■□□ 2.42
SNRPA1-215ENST00000561187 HOXA11P31270 313 aaPredicted RBP30.17■■■□□ 2.42
SNRPA1-215ENST00000561187 UBXN11Q5T124 520 aa30.17■■■□□ 2.42
SNRPA1-215ENST00000561187 PBXIP1Q96AQ6 731 aa30.17■■■□□ 2.42
SNRPA1-215ENST00000561187 VN1R3Q9BXE9 311 aa30.17■■■□□ 2.42
SNRPA1-215ENST00000561187 POMKQ9H5K3 350 aa30.17■■■□□ 2.42
SNRPA1-215ENST00000561187 XPNPEP1Q9NQW7 623 aa30.17■■■□□ 2.42
SNRPA1-215ENST00000561187 PPP4R2Q9NY27 417 aa30.17■■■□□ 2.42
SNRPA1-215ENST00000561187 ZNF623O75123 536 aa30.16■■■□□ 2.42
SNRPA1-215ENST00000561187 ERLIN2O94905 339 aa30.16■■■□□ 2.42
SNRPA1-215ENST00000561187 POMCP01189 267 aa30.16■■■□□ 2.42
SNRPA1-215ENST00000561187 HOXB8P17481 243 aaPredicted RBP30.16■■■□□ 2.42
SNRPA1-215ENST00000561187 BMS1Q14692 1282 aaKnown RBP30.16■■■□□ 2.42
SNRPA1-215ENST00000561187 TPRNQ4KMQ1 711 aa30.16■■■□□ 2.42
SNRPA1-215ENST00000561187 ALYREFQ86V81 257 aaKnown RBP30.16■■■□□ 2.42
SNRPA1-215ENST00000561187 DIS3L2Q8IYB7 885 aaKnown RBP30.16■■■□□ 2.42
SNRPA1-215ENST00000561187 FEZF2Q8TBJ5 459 aa30.16■■■□□ 2.42
SNRPA1-215ENST00000561187 TCP11Q8WWU5 503 aa30.16■■■□□ 2.42
SNRPA1-215ENST00000561187 CPB2Q96IY4 423 aa30.16■■■□□ 2.42
SNRPA1-215ENST00000561187 CCDC43Q96MW1 224 aaKnown RBP30.16■■■□□ 2.42
SNRPA1-215ENST00000561187 PPME1Q9Y570 386 aa30.16■■■□□ 2.42
SNRPA1-215ENST00000561187 ZDBF2Q9HCK1 2354 aa30.16■■■□□ 2.42
SNRPA1-215ENST00000561187 PIEZO1Q92508 2521 aa30.16■■■□□ 2.42
SNRPA1-215ENST00000561187 DDHD2O94830 711 aa30.15■■■□□ 2.42
SNRPA1-215ENST00000561187 SLITRK3O94933 977 aa30.15■■■□□ 2.42
SNRPA1-215ENST00000561187 ATP2B1P20020 1258 aa30.15■■■□□ 2.42
SNRPA1-215ENST00000561187 NEK4P51957 841 aa30.15■■■□□ 2.42
SNRPA1-215ENST00000561187 CES5AQ6NT32 575 aa30.15■■■□□ 2.42
SNRPA1-215ENST00000561187 DDX53Q86TM3 631 aaKnown RBP30.15■■■□□ 2.42
SNRPA1-215ENST00000561187 EXOC8Q8IYI6 725 aa30.15■■■□□ 2.42
SNRPA1-215ENST00000561187 EIF2AQ9BY44 585 aaKnown RBP30.15■■■□□ 2.42
SNRPA1-215ENST00000561187 NEMFO60524 1076 aa30.14■■■□□ 2.42
SNRPA1-215ENST00000561187 CTSAP10619 480 aa30.14■■■□□ 2.42
SNRPA1-215ENST00000561187 TXKP42681 527 aa30.14■■■□□ 2.42
SNRPA1-215ENST00000561187 GUCY1B3Q02153 619 aa30.14■■■□□ 2.42
SNRPA1-215ENST00000561187 ASAP3Q8TDY4 903 aa30.14■■■□□ 2.42
SNRPA1-215ENST00000561187 FAM193BQ96PV7 902 aaPredicted RBP30.14■■■□□ 2.42
SNRPA1-215ENST00000561187 APOL6Q9BWW8 343 aa30.14■■■□□ 2.42
SNRPA1-215ENST00000561187 TTC12Q9H892 705 aaPredicted RBP30.14■■■□□ 2.42
SNRPA1-215ENST00000561187 PCDHA12Q9UN75 941 aa30.14■■■□□ 2.42
SNRPA1-215ENST00000561187 INO80B-WBP1J3KQ70 363 aa30.13■■■□□ 2.41
SNRPA1-215ENST00000561187 GAS2O43903 313 aaKnown RBP30.13■■■□□ 2.41
SNRPA1-215ENST00000561187 TSPAN1O60635 241 aa30.13■■■□□ 2.41
SNRPA1-215ENST00000561187 NHLH1Q02575 133 aa30.13■■■□□ 2.41
SNRPA1-215ENST00000561187 ST3GAL1Q11201 340 aa30.13■■■□□ 2.41
SNRPA1-215ENST00000561187 ADAM7Q9H2U9 754 aa30.13■■■□□ 2.41
SNRPA1-215ENST00000561187 PRG3Q9Y2Y8 225 aaPredicted RBP30.13■■■□□ 2.41
SNRPA1-215ENST00000561187 HES2Q9Y543 173 aa30.13■■■□□ 2.41
SNRPA1-215ENST00000561187 POTEMA6NI47 508 aa30.12■■■□□ 2.41
SNRPA1-215ENST00000561187 SPDYE4A6NLX3 237 aa30.12■■■□□ 2.41
SNRPA1-215ENST00000561187 C2CD4DB7Z1M9 353 aa30.12■■■□□ 2.41
SNRPA1-215ENST00000561187 TRIM29Q14134 588 aa30.12■■■□□ 2.41
SNRPA1-215ENST00000561187 PTPN14Q15678 1187 aa30.12■■■□□ 2.41
SNRPA1-215ENST00000561187 PTPN21Q16825 1174 aa30.12■■■□□ 2.41
SNRPA1-215ENST00000561187 SMG8Q8ND04 991 aaKnown RBP30.12■■■□□ 2.41
SNRPA1-215ENST00000561187 PIGOQ8TEQ8 1089 aa30.12■■■□□ 2.41
SNRPA1-215ENST00000561187 IPPQ9Y573 584 aa30.12■■■□□ 2.41
SNRPA1-215ENST00000561187 ITGA4P13612 1032 aa30.11■■■□□ 2.41
SNRPA1-215ENST00000561187 SIGLEC14Q08ET2 396 aa30.11■■■□□ 2.41
SNRPA1-215ENST00000561187 CAPSQ13938 189 aa30.11■■■□□ 2.41
SNRPA1-215ENST00000561187 MRPL10Q7Z7H8 261 aaKnown RBP30.11■■■□□ 2.41
SNRPA1-215ENST00000561187 SUGP1Q8IWZ8 645 aaKnown RBP30.11■■■□□ 2.41
SNRPA1-215ENST00000561187 RSPH1Q8WYR4 309 aa30.11■■■□□ 2.41
SNRPA1-215ENST00000561187 RNF39Q9H2S5 420 aa30.11■■■□□ 2.41
SNRPA1-215ENST00000561187 CNTNAP2Q9UHC6 1331 aa30.11■■■□□ 2.41
SNRPA1-215ENST00000561187 C2CD2LO14523 706 aa30.1■■■□□ 2.41
SNRPA1-215ENST00000561187 ASAP2O43150 1006 aa30.1■■■□□ 2.41
SNRPA1-215ENST00000561187 USO1O60763 962 aaKnown RBP30.1■■■□□ 2.41
SNRPA1-215ENST00000561187 MLH1P40692 756 aa30.1■■■□□ 2.41
SNRPA1-215ENST00000561187 PTENP60484 403 aa30.1■■■□□ 2.41
SNRPA1-215ENST00000561187 ITIH3Q06033 890 aa30.1■■■□□ 2.41
SNRPA1-215ENST00000561187 IER5LQ5T953 404 aa30.1■■■□□ 2.41
SNRPA1-215ENST00000561187 TMC5Q6UXY8 1006 aa30.1■■■□□ 2.41
SNRPA1-215ENST00000561187 MAEAQ7L5Y9 396 aa30.1■■■□□ 2.41
SNRPA1-215ENST00000561187 CDR2LQ86X02 465 aaPredicted RBP30.1■■■□□ 2.41
SNRPA1-215ENST00000561187 TMEM60Q9H2L4 133 aa30.1■■■□□ 2.41
SNRPA1-215ENST00000561187 FAN1Q9Y2M0 1017 aa30.1■■■□□ 2.41
SNRPA1-215ENST00000561187 NR2E1Q9Y466 385 aa30.1■■■□□ 2.41
SNRPA1-215ENST00000561187 NCLP19338 710 aaKnown RBP30.09■■■□□ 2.41
SNRPA1-215ENST00000561187 TFDP1Q14186 410 aa30.09■■■□□ 2.41
SNRPA1-215ENST00000561187 GAD1Q99259 594 aa30.09■■■□□ 2.41
SNRPA1-215ENST00000561187 HSD17B14Q9BPX1 270 aa30.09■■■□□ 2.41
SNRPA1-215ENST00000561187 POLR3FQ9H1D9 316 aaPredicted RBP30.09■■■□□ 2.41
SNRPA1-215ENST00000561187 SMOC2Q9H3U7 446 aa30.09■■■□□ 2.41
SNRPA1-215ENST00000561187 DZANK1Q9NVP4 752 aa30.09■■■□□ 2.41
SNRPA1-215ENST00000561187 NRP1O14786 923 aa30.08■■■□□ 2.41
SNRPA1-215ENST00000561187 B4GALT5O43286 388 aa30.08■■■□□ 2.41
SNRPA1-215ENST00000561187 SEC24BO95487 1268 aa30.08■■■□□ 2.41
SNRPA1-215ENST00000561187 MCM7P33993 719 aa30.08■■■□□ 2.41
SNRPA1-215ENST00000561187 OR1G1P47890 313 aa30.08■■■□□ 2.41
SNRPA1-215ENST00000561187 SCNN1GP51170 649 aa30.08■■■□□ 2.41
SNRPA1-215ENST00000561187 MBTD1Q05BQ5 628 aa30.08■■■□□ 2.41
SNRPA1-215ENST00000561187 MXD4Q14582 209 aaPredicted RBP30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms