RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 CLEC1BQ9P126 229 aa14.06□□□□□ -0.16
CHRNA3-208ENST00000561128 CACNG4Q9UBN1 327 aa14.06□□□□□ -0.16
CHRNA3-208ENST00000561128 LRWD1Q9UFC0 647 aa14.06□□□□□ -0.16
CHRNA3-208ENST00000561128 BARX2Q9UMQ3 279 aaPredicted RBP14.06□□□□□ -0.16
CHRNA3-208ENST00000561128 KIAA1024Q9UPX6 916 aa14.06□□□□□ -0.16
CHRNA3-208ENST00000561128 IPPQ9Y573 584 aa14.06□□□□□ -0.16
CHRNA3-208ENST00000561128 ARHGEF35A5YM69 484 aa14.05□□□□□ -0.16
CHRNA3-208ENST00000561128 GRXCR2A6NFK2 248 aa14.05□□□□□ -0.16
CHRNA3-208ENST00000561128 TNFRSF10AO00220 468 aa14.05□□□□□ -0.16
CHRNA3-208ENST00000561128 HOXA2O43364 376 aa14.05□□□□□ -0.16
CHRNA3-208ENST00000561128 ZNF623O75123 536 aa14.05□□□□□ -0.16
CHRNA3-208ENST00000561128 ZC3H11AO75152 810 aaKnown RBP eCLIP14.05□□□□□ -0.16
CHRNA3-208ENST00000561128 CYP11B2P19099 503 aa14.05□□□□□ -0.16
CHRNA3-208ENST00000561128 SLC11A1P49279 550 aa14.05□□□□□ -0.16
CHRNA3-208ENST00000561128 CDC42EP1Q00587 391 aa14.05□□□□□ -0.16
CHRNA3-208ENST00000561128 MXD4Q14582 209 aaPredicted RBP14.05□□□□□ -0.16
CHRNA3-208ENST00000561128 NOMO2Q5JPE7 1267 aa14.05□□□□□ -0.16
CHRNA3-208ENST00000561128 EEF1DP3Q658K8 133 aa14.05□□□□□ -0.16
CHRNA3-208ENST00000561128 FAM173BQ6P4H8 233 aa14.05□□□□□ -0.16
CHRNA3-208ENST00000561128 AUTS2Q8WXX7 1259 aa14.05□□□□□ -0.16
CHRNA3-208ENST00000561128 MRPS27Q92552 414 aaKnown RBP14.05□□□□□ -0.16
CHRNA3-208ENST00000561128 SYMPKQ92797 1274 aaKnown RBP14.05□□□□□ -0.16
CHRNA3-208ENST00000561128 ZFP42Q96MM3 310 aa14.05□□□□□ -0.16
CHRNA3-208ENST00000561128 CCDC43Q96MW1 224 aaKnown RBP14.05□□□□□ -0.16
CHRNA3-208ENST00000561128 NACC1Q96RE7 527 aa14.05□□□□□ -0.16
CHRNA3-208ENST00000561128 PLIN2Q99541 437 aa14.05□□□□□ -0.16
CHRNA3-208ENST00000561128 GBP3Q9H0R5 595 aa14.05□□□□□ -0.16
CHRNA3-208ENST00000561128 TLR9Q9NR96 1032 aa14.05□□□□□ -0.16
CHRNA3-208ENST00000561128 MIOSQ9NXC5 875 aa14.05□□□□□ -0.16
CHRNA3-208ENST00000561128 CDH22Q9UJ99 828 aa14.05□□□□□ -0.16
CHRNA3-208ENST00000561128 PCDHB12Q9Y5F1 795 aa14.05□□□□□ -0.16
CHRNA3-208ENST00000561128 GTF3C3Q9Y5Q9 886 aa14.05□□□□□ -0.16
CHRNA3-208ENST00000561128 H3BQV1 296 aa14.04□□□□□ -0.16
CHRNA3-208ENST00000561128 ASAP2O43150 1006 aa14.04□□□□□ -0.16
CHRNA3-208ENST00000561128 ERLIN2O94905 339 aa14.04□□□□□ -0.16
CHRNA3-208ENST00000561128 XRCC6P12956 609 aaKnown RBP eCLIP14.04□□□□□ -0.16
CHRNA3-208ENST00000561128 MLH1P40692 756 aa14.04□□□□□ -0.16
CHRNA3-208ENST00000561128 PRPHP41219 470 aa14.04□□□□□ -0.16
CHRNA3-208ENST00000561128 MCM2P49736 904 aa14.04□□□□□ -0.16
CHRNA3-208ENST00000561128 PLCB3Q01970 1234 aa14.04□□□□□ -0.16
CHRNA3-208ENST00000561128 ADAM15Q13444 863 aa14.04□□□□□ -0.16
CHRNA3-208ENST00000561128 AAK1Q2M2I8 961 aa14.04□□□□□ -0.16
CHRNA3-208ENST00000561128 PTCRAQ6ISU1 281 aaPredicted RBP14.04□□□□□ -0.16
CHRNA3-208ENST00000561128 FAM43BQ6ZT52 329 aaPredicted RBP14.04□□□□□ -0.16
CHRNA3-208ENST00000561128 EXOC8Q8IYI6 725 aa14.04□□□□□ -0.16
CHRNA3-208ENST00000561128 ERMNQ8TAM6 284 aa14.04□□□□□ -0.16
CHRNA3-208ENST00000561128 MSLNLQ96KJ4 702 aa14.04□□□□□ -0.16
CHRNA3-208ENST00000561128 TCF25Q9BQ70 676 aa14.04□□□□□ -0.16
CHRNA3-208ENST00000561128 APOL6Q9BWW8 343 aa14.04□□□□□ -0.16
CHRNA3-208ENST00000561128 NFKBIZQ9BYH8 718 aa14.04□□□□□ -0.16
CHRNA3-208ENST00000561128 RSAD1Q9HA92 442 aa14.04□□□□□ -0.16
CHRNA3-208ENST00000561128 MUC3AQ02505 3323 aa14.03□□□□□ -0.16
CHRNA3-208ENST00000561128 VPS37CA5D8V6 355 aaPredicted RBP14.03□□□□□ -0.16
CHRNA3-208ENST00000561128 VWA3AA6NCI4 1184 aa14.03□□□□□ -0.16
CHRNA3-208ENST00000561128 NPTXRO95502 500 aa14.03□□□□□ -0.16
CHRNA3-208ENST00000561128 POMCP01189 267 aa14.03□□□□□ -0.16
CHRNA3-208ENST00000561128 GALTP07902 379 aa14.03□□□□□ -0.16
CHRNA3-208ENST00000561128 NCLP19338 710 aaKnown RBP14.03□□□□□ -0.16
CHRNA3-208ENST00000561128 RAB27AP51159 221 aa14.03□□□□□ -0.16
CHRNA3-208ENST00000561128 POU5F1BQ06416 359 aa14.03□□□□□ -0.16
CHRNA3-208ENST00000561128 RESTQ13127 1097 aa14.03□□□□□ -0.16
CHRNA3-208ENST00000561128 KCNC3Q14003 757 aa14.03□□□□□ -0.16
CHRNA3-208ENST00000561128 TFDP1Q14186 410 aa14.03□□□□□ -0.16
CHRNA3-208ENST00000561128 DUSP6Q16828 381 aa14.03□□□□□ -0.16
CHRNA3-208ENST00000561128 RILPL1Q5EBL4 403 aa14.03□□□□□ -0.16
CHRNA3-208ENST00000561128 LARP1BQ659C4 914 aaKnown RBP14.03□□□□□ -0.16
CHRNA3-208ENST00000561128 HAUS3Q68CZ6 603 aa14.03□□□□□ -0.16
CHRNA3-208ENST00000561128 GLB1LQ6UWU2 654 aa14.03□□□□□ -0.16
CHRNA3-208ENST00000561128 TAS1R3Q7RTX0 852 aa14.03□□□□□ -0.16
CHRNA3-208ENST00000561128 EFHBQ8N7U6 833 aa14.03□□□□□ -0.16
CHRNA3-208ENST00000561128 GSTCDQ8NEC7 633 aa14.03□□□□□ -0.16
CHRNA3-208ENST00000561128 MCPH1Q8NEM0 835 aa14.03□□□□□ -0.16
CHRNA3-208ENST00000561128 GAD1Q99259 594 aa14.03□□□□□ -0.16
CHRNA3-208ENST00000561128 CSRNP2Q9H175 543 aa14.03□□□□□ -0.16
CHRNA3-208ENST00000561128 PDZD7Q9H5P4 517 aa14.03□□□□□ -0.16
CHRNA3-208ENST00000561128 AAASQ9NRG9 546 aa14.03□□□□□ -0.16
CHRNA3-208ENST00000561128 MARCH5Q9NX47 278 aa14.03□□□□□ -0.16
CHRNA3-208ENST00000561128 SPG21Q9NZD8 308 aa14.03□□□□□ -0.16
CHRNA3-208ENST00000561128 CNTNAP2Q9UHC6 1331 aa14.03□□□□□ -0.16
CHRNA3-208ENST00000561128 MBTPS2O43462 519 aa14.02□□□□□ -0.17
CHRNA3-208ENST00000561128 LIG1P18858 919 aa14.02□□□□□ -0.17
CHRNA3-208ENST00000561128 AKAP5P24588 427 aa14.02□□□□□ -0.17
CHRNA3-208ENST00000561128 SCNN1GP51170 649 aa14.02□□□□□ -0.17
CHRNA3-208ENST00000561128 UBE3AQ05086 875 aa14.02□□□□□ -0.17
CHRNA3-208ENST00000561128 TMEM119Q4V9L6 283 aa14.02□□□□□ -0.17
CHRNA3-208ENST00000561128 NOTUMQ6P988 496 aa14.02□□□□□ -0.17
CHRNA3-208ENST00000561128 PPP4R3CPQ6ZMV5 832 aa14.02□□□□□ -0.17
CHRNA3-208ENST00000561128 FAM178BQ8IXR5 827 aa14.02□□□□□ -0.17
CHRNA3-208ENST00000561128 IL27Q8NEV9 243 aa14.02□□□□□ -0.17
CHRNA3-208ENST00000561128 RABGGTAQ92696 567 aa14.02□□□□□ -0.17
CHRNA3-208ENST00000561128 MRPL9Q9BYD2 267 aaKnown RBP14.02□□□□□ -0.17
CHRNA3-208ENST00000561128 ZBP1Q9H171 429 aa14.02□□□□□ -0.17
CHRNA3-208ENST00000561128 FZD8Q9H461 694 aa14.02□□□□□ -0.17
CHRNA3-208ENST00000561128 ENTPD7Q9NQZ7 604 aa14.02□□□□□ -0.17
CHRNA3-208ENST00000561128 KLK14Q9P0G3 267 aa14.02□□□□□ -0.17
CHRNA3-208ENST00000561128 LZTS1Q9Y250 596 aa14.02□□□□□ -0.17
CHRNA3-208ENST00000561128 KIF3AQ9Y496 699 aa14.02□□□□□ -0.17
CHRNA3-208ENST00000561128 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.02□□□□□ -0.17
CHRNA3-208ENST00000561128 TDRD15B5MCY1 1934 aaKnown RBP14.02□□□□□ -0.17
CHRNA3-208ENST00000561128 MYH15Q9Y2K3 1946 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms