RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 SPOCD1Q6ZMY3 1216 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 KIAA1211Q6ZU35 1233 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 ARHGAP27Q6ZUM4 889 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 NEK10Q6ZWH5 1172 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 B4GALNT4Q76KP1 1039 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 CEP68Q76N32 757 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 RNF44Q7L0R7 432 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 OTOP1Q7RTM1 612 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.3□□□□□ -2.04
RTF1-207ENST00000561076 RPAINQ86UA6 219 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 ERC1Q8IUD2 1116 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 NOSTRINQ8IVI9 506 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 RPAP2Q8IXW5 612 aaPredicted RBP2.3□□□□□ -2.04
RTF1-207ENST00000561076 CACNA2D3Q8IZS8 1091 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 TSPYL6Q8N831 410 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 ATP11CQ8NB49 1132 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 CCDC191Q8NCU4 936 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 KREMEN2Q8NCW0 462 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 TOR1AIP2Q8NFQ8 470 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 TDRD7Q8NHU6 1098 aaKnown RBP2.3□□□□□ -2.04
RTF1-207ENST00000561076 MGARPQ8TDB4 240 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 BRIX1Q8TDN6 353 aaKnown RBP2.3□□□□□ -2.04
RTF1-207ENST00000561076 NOC3LQ8WTT2 800 aaKnown RBP2.3□□□□□ -2.04
RTF1-207ENST00000561076 NRG4Q8WWG1 115 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 RUFY2Q8WXA3 655 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 RSAD2Q8WXG1 361 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 NANOS1Q8WY41 292 aaKnown RBP2.3□□□□□ -2.04
RTF1-207ENST00000561076 RIN2Q8WYP3 895 aaPredicted RBP2.3□□□□□ -2.04
RTF1-207ENST00000561076 COPS5Q92905 334 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 CUL5Q93034 780 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 TNFRSF25Q93038 417 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 ISL2Q96A47 359 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 JAKMIP2Q96AA8 810 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 RRP36Q96EU6 259 aaKnown RBP2.3□□□□□ -2.04
RTF1-207ENST00000561076 SLC35A4Q96G79 324 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 CALML4Q96GE6 196 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 COX4I2Q96KJ9 171 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 COG8Q96MW5 612 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 C7orf26Q96N11 449 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 YME1L1Q96TA2 773 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 PRPF18Q99633 342 aaKnown RBP2.3□□□□□ -2.04
RTF1-207ENST00000561076 SLF1Q9BQI6 1058 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 HEPHQ9BQS7 1158 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 ADPGKQ9BRR6 497 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 COLEC11Q9BWP8 271 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 CDADC1Q9BWV3 514 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 JAM3Q9BX67 310 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 STK31Q9BXU1 1019 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 STK33Q9BYT3 514 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 TRIM5Q9C035 493 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 PDGFDQ9GZP0 370 aaPredicted RBP2.3□□□□□ -2.04
RTF1-207ENST00000561076 SIL1Q9H173 461 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 KCTD10Q9H3F6 313 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 MS4A5Q9H3V2 200 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 TSPY26PQ9H489 355 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 EPB41L1Q9H4G0 881 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 SYNCQ9H7C4 482 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 C14orf93Q9H972 538 aaKnown RBP2.3□□□□□ -2.04
RTF1-207ENST00000561076 PRDM5Q9NQX1 630 aaPredicted RBP2.3□□□□□ -2.04
RTF1-207ENST00000561076 KCNH7Q9NS40 1196 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 TM7SF3Q9NS93 570 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 RIC8BQ9NVN3 520 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 PIH1D1Q9NWS0 290 aaKnown RBP2.3□□□□□ -2.04
RTF1-207ENST00000561076 PKD2L1Q9P0L9 805 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 PPARGC1AQ9UBK2 798 aaKnown RBP2.3□□□□□ -2.04
RTF1-207ENST00000561076 MTRRQ9UBK8 725 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 SEL1LQ9UBV2 794 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 TMEFF2Q9UIK5 374 aaPredicted RBP2.3□□□□□ -2.04
RTF1-207ENST00000561076 SERPINB13Q9UIV8 391 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 TUBD1Q9UJT1 453 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 RPS6KA6Q9UK32 745 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 DSEQ9UL01 958 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 TMCC3Q9ULS5 477 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 SYNGAP1Q96PV0 1343 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 CLSPNQ9HAW4 1339 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 ELOA3CA0A087WX78 387 aaPredicted RBP2.29□□□□□ -2.04
RTF1-207ENST00000561076 A0A088AWK7 358 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 LCHNA4D1U4 455 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 PI4KAP2A4QPH2 592 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 PGPEP1LA6NFU8 196 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 ELOA3DA6NLF2 546 aaPredicted RBP2.29□□□□□ -2.04
RTF1-207ENST00000561076 ZNF561-AS1K7EIQ3 104 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 GTPBP1O00178 669 aaKnown RBP2.29□□□□□ -2.04
RTF1-207ENST00000561076 SYT5O00445 386 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 WNT9AO14904 365 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 FOXP2O15409 715 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 HTRA2O43464 458 aaPredicted RBP2.29□□□□□ -2.04
RTF1-207ENST00000561076 AHCYL1O43865 530 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 NRP2O60462 931 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 PLA2G6O60733 806 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 USO1O60763 962 aaKnown RBP2.29□□□□□ -2.04
RTF1-207ENST00000561076 INMTO95050 263 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 CTSBP07858 339 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 TMEM253P0C7T8 217 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 ZNF865P0CJ78 1059 aaPredicted RBP2.29□□□□□ -2.04
RTF1-207ENST00000561076 ADH5P11766 374 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 IFNGR1P15260 489 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 TSHRP16473 764 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 DESP17661 470 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 PTX3P26022 381 aaPredicted RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms