RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 FOSBP53539 338 aa18.07■□□□□ 0.48
SNX1-213ENST00000561026 ST3GAL1Q11201 340 aa18.07■□□□□ 0.48
SNX1-213ENST00000561026 PCBP1Q15365 356 aaKnown RBP eCLIP18.07■□□□□ 0.48
SNX1-213ENST00000561026 HFE2Q6ZVN8 426 aa18.07■□□□□ 0.48
SNX1-213ENST00000561026 ZNF280BQ86YH2 543 aa18.07■□□□□ 0.48
SNX1-213ENST00000561026 ZBP1Q9H171 429 aa18.07■□□□□ 0.48
SNX1-213ENST00000561026 ANKEF1Q9NU02 776 aa18.07■□□□□ 0.48
SNX1-213ENST00000561026 DNAJB4Q9UDY4 337 aa18.07■□□□□ 0.48
SNX1-213ENST00000561026 DGAT1O75907 488 aa18.06■□□□□ 0.48
SNX1-213ENST00000561026 PTENP60484 403 aa18.06■□□□□ 0.48
SNX1-213ENST00000561026 POU5F1BQ06416 359 aa18.06■□□□□ 0.48
SNX1-213ENST00000561026 URGCPQ8TCY9 931 aa18.06■□□□□ 0.48
SNX1-213ENST00000561026 BCL7CQ8WUZ0 217 aaPredicted RBP18.06■□□□□ 0.48
SNX1-213ENST00000561026 APOL5Q9BWW9 433 aa18.06■□□□□ 0.48
SNX1-213ENST00000561026 GBP3Q9H0R5 595 aa18.06■□□□□ 0.48
SNX1-213ENST00000561026 RSAD1Q9HA92 442 aa18.06■□□□□ 0.48
SNX1-213ENST00000561026 KANSL3Q9P2N6 904 aa18.06■□□□□ 0.48
SNX1-213ENST00000561026 IRAK3Q9Y616 596 aa18.06■□□□□ 0.48
SNX1-213ENST00000561026 CNTNAP2Q9UHC6 1331 aa18.06■□□□□ 0.48
SNX1-213ENST00000561026 B4GALT3O60512 393 aa18.05■□□□□ 0.48
SNX1-213ENST00000561026 ERLIN2O94905 339 aa18.05■□□□□ 0.48
SNX1-213ENST00000561026 CTSAP10619 480 aa18.05■□□□□ 0.48
SNX1-213ENST00000561026 NCLP19338 710 aaKnown RBP18.05■□□□□ 0.48
SNX1-213ENST00000561026 SLC11A1P49279 550 aa18.05■□□□□ 0.48
SNX1-213ENST00000561026 AFF1P51825 1210 aaKnown RBP18.05■□□□□ 0.48
SNX1-213ENST00000561026 GIT2Q14161 759 aa18.05■□□□□ 0.48
SNX1-213ENST00000561026 TPRNQ4KMQ1 711 aa18.05■□□□□ 0.48
SNX1-213ENST00000561026 IFNLR1Q8IU57 520 aaPredicted RBP18.05■□□□□ 0.48
SNX1-213ENST00000561026 AUTS2Q8WXX7 1259 aa18.05■□□□□ 0.48
SNX1-213ENST00000561026 LIMCH1Q9UPQ0 1083 aa18.05■□□□□ 0.48
SNX1-213ENST00000561026 WDFY4Q6ZS81 3184 aa18.05■□□□□ 0.48
SNX1-213ENST00000561026 TECTAO75443 2155 aa18.05■□□□□ 0.48
SNX1-213ENST00000561026 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.04■□□□□ 0.48
SNX1-213ENST00000561026 TSPAN1O60635 241 aa18.04■□□□□ 0.48
SNX1-213ENST00000561026 DDHD2O94830 711 aa18.04■□□□□ 0.48
SNX1-213ENST00000561026 XRCC6P12956 609 aaKnown RBP eCLIP18.04■□□□□ 0.48
SNX1-213ENST00000561026 AXLP30530 894 aa18.04■□□□□ 0.48
SNX1-213ENST00000561026 CA8P35219 290 aa18.04■□□□□ 0.48
SNX1-213ENST00000561026 ARL2P36404 184 aa18.04■□□□□ 0.48
SNX1-213ENST00000561026 RARRES1P49788 294 aa18.04■□□□□ 0.48
SNX1-213ENST00000561026 ITIH3Q06033 890 aa18.04■□□□□ 0.48
SNX1-213ENST00000561026 TFDP1Q14186 410 aa18.04■□□□□ 0.48
SNX1-213ENST00000561026 TMEM87AQ8NBN3 555 aa18.04■□□□□ 0.48
SNX1-213ENST00000561026 SMG8Q8ND04 991 aaKnown RBP18.04■□□□□ 0.48
SNX1-213ENST00000561026 CNNM3Q8NE01 707 aa18.04■□□□□ 0.48
SNX1-213ENST00000561026 ASAP3Q8TDY4 903 aa18.04■□□□□ 0.48
SNX1-213ENST00000561026 TMEM60Q9H2L4 133 aa18.04■□□□□ 0.48
SNX1-213ENST00000561026 ADAM7Q9H2U9 754 aa18.04■□□□□ 0.48
SNX1-213ENST00000561026 UBN1Q9NPG3 1134 aa18.04■□□□□ 0.48
SNX1-213ENST00000561026 INO80B-WBP1J3KQ70 363 aa18.04■□□□□ 0.48
SNX1-213ENST00000561026 ALDH2P05091 517 aa18.04■□□□□ 0.48
SNX1-213ENST00000561026 MCM7P33993 719 aa18.04■□□□□ 0.48
SNX1-213ENST00000561026 ZXDAP98168 799 aa18.04■□□□□ 0.48
SNX1-213ENST00000561026 NCBP1Q09161 790 aaKnown RBP18.04■□□□□ 0.48
SNX1-213ENST00000561026 CAPSQ13938 189 aa18.04■□□□□ 0.48
SNX1-213ENST00000561026 SAFBQ15424 915 aaKnown RBP eCLIP18.04■□□□□ 0.48
SNX1-213ENST00000561026 CES5AQ6NT32 575 aa18.04■□□□□ 0.48
SNX1-213ENST00000561026 NOTUMQ6P988 496 aa18.04■□□□□ 0.48
SNX1-213ENST00000561026 TRIM67Q6ZTA4 783 aa18.04■□□□□ 0.48
SNX1-213ENST00000561026 PIGOQ8TEQ8 1089 aa18.04■□□□□ 0.48
SNX1-213ENST00000561026 CCDC51Q96ER9 411 aa18.04■□□□□ 0.48
SNX1-213ENST00000561026 MFSD14AQ96MC6 490 aa18.04■□□□□ 0.48
SNX1-213ENST00000561026 FAM193BQ96PV7 902 aaPredicted RBP18.04■□□□□ 0.48
SNX1-213ENST00000561026 TMEM175Q9BSA9 504 aa18.04■□□□□ 0.48
SNX1-213ENST00000561026 VN1R3Q9BXE9 311 aa18.04■□□□□ 0.48
SNX1-213ENST00000561026 NFKBIZQ9BYH8 718 aa18.04■□□□□ 0.48
SNX1-213ENST00000561026 STK39Q9UEW8 545 aa18.04■□□□□ 0.48
SNX1-213ENST00000561026 IPPQ9Y573 584 aa18.04■□□□□ 0.48
SNX1-213ENST00000561026 A0A087WWV3 80 aa18.03■□□□□ 0.48
SNX1-213ENST00000561026 POTEMA6NI47 508 aa18.03■□□□□ 0.48
SNX1-213ENST00000561026 POMCP01189 267 aa18.03■□□□□ 0.48
SNX1-213ENST00000561026 SPATA31C1P0DKV0 1188 aa18.03■□□□□ 0.48
SNX1-213ENST00000561026 ITGA4P13612 1032 aa18.03■□□□□ 0.48
SNX1-213ENST00000561026 ATP2B1P20020 1258 aa18.03■□□□□ 0.48
SNX1-213ENST00000561026 GLRA2P23416 452 aa18.03■□□□□ 0.48
SNX1-213ENST00000561026 HOXD11P31277 338 aaPredicted RBP18.03■□□□□ 0.48
SNX1-213ENST00000561026 GUCY1B3Q02153 619 aa18.03■□□□□ 0.48
SNX1-213ENST00000561026 MBTD1Q05BQ5 628 aa18.03■□□□□ 0.48
SNX1-213ENST00000561026 BMP8AQ7Z5Y6 402 aa18.03■□□□□ 0.48
SNX1-213ENST00000561026 CPB2Q96IY4 423 aa18.03■□□□□ 0.48
SNX1-213ENST00000561026 CCDC43Q96MW1 224 aaKnown RBP18.03■□□□□ 0.48
SNX1-213ENST00000561026 NECTIN4Q96NY8 510 aa18.03■□□□□ 0.48
SNX1-213ENST00000561026 LLPHQ9BRT6 129 aaKnown RBP18.03■□□□□ 0.48
SNX1-213ENST00000561026 EIF2AQ9BY44 585 aaKnown RBP18.03■□□□□ 0.48
SNX1-213ENST00000561026 CSRNP2Q9H175 543 aa18.03■□□□□ 0.48
SNX1-213ENST00000561026 CDH22Q9UJ99 828 aa18.03■□□□□ 0.48
SNX1-213ENST00000561026 FAN1Q9Y2M0 1017 aa18.03■□□□□ 0.48
SNX1-213ENST00000561026 INPPL1O15357 1258 aa18.02■□□□□ 0.47
SNX1-213ENST00000561026 PTPN14Q15678 1187 aa18.02■□□□□ 0.47
SNX1-213ENST00000561026 AMHR2Q16671 573 aa18.02■□□□□ 0.47
SNX1-213ENST00000561026 CATSPER3Q86XQ3 398 aa18.02■□□□□ 0.47
SNX1-213ENST00000561026 CCDC83Q8IWF9 413 aa18.02■□□□□ 0.47
SNX1-213ENST00000561026 SLC22A17Q8WUG5 538 aa18.02■□□□□ 0.47
SNX1-213ENST00000561026 C8orf76Q96K31 380 aa18.02■□□□□ 0.47
SNX1-213ENST00000561026 KCNH6Q9H252 994 aa18.02■□□□□ 0.47
SNX1-213ENST00000561026 RNF39Q9H2S5 420 aa18.02■□□□□ 0.47
SNX1-213ENST00000561026 TUFT1Q9NNX1 390 aa18.02■□□□□ 0.47
SNX1-213ENST00000561026 ARID2Q68CP9 1835 aa18.02■□□□□ 0.47
SNX1-213ENST00000561026 PIEZO1Q92508 2521 aa18.01■□□□□ 0.47
SNX1-213ENST00000561026 TMEM221A6NGB7 291 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms