RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 VWA8A3KMH1 1905 aa8.17□□□□□ -1.1
GABPB1-211ENST00000561010 CCDC196A0A1B0GTZ2 297 aa8.16□□□□□ -1.1
GABPB1-211ENST00000561010 CITO14578 2027 aa8.16□□□□□ -1.1
GABPB1-211ENST00000561010 DCXO43602 365 aa8.16□□□□□ -1.1
GABPB1-211ENST00000561010 GAS7O60861 476 aa8.16□□□□□ -1.1
GABPB1-211ENST00000561010 FGF18O76093 207 aa8.16□□□□□ -1.1
GABPB1-211ENST00000561010 HMGB1P09429 215 aaKnown RBP8.16□□□□□ -1.1
GABPB1-211ENST00000561010 CIITAP33076 1130 aa8.16□□□□□ -1.1
GABPB1-211ENST00000561010 SLC26A2P50443 739 aa8.16□□□□□ -1.1
GABPB1-211ENST00000561010 CRYBB1P53674 252 aaPredicted RBP8.16□□□□□ -1.1
GABPB1-211ENST00000561010 RCAN1P53805 252 aa8.16□□□□□ -1.1
GABPB1-211ENST00000561010 NLRP5P59047 1200 aa8.16□□□□□ -1.1
GABPB1-211ENST00000561010 SETQ01105 290 aaPredicted RBP8.16□□□□□ -1.1
GABPB1-211ENST00000561010 AKAP17AQ02040 695 aaKnown RBP8.16□□□□□ -1.1
GABPB1-211ENST00000561010 SMAD4Q13485 552 aaKnown RBP8.16□□□□□ -1.1
GABPB1-211ENST00000561010 SMAD2Q15796 467 aaKnown RBP8.16□□□□□ -1.1
GABPB1-211ENST00000561010 MTERF2Q49AM1 385 aa8.16□□□□□ -1.1
GABPB1-211ENST00000561010 CLLU1OSQ5K130 101 aa8.16□□□□□ -1.1
GABPB1-211ENST00000561010 LRCH2Q5VUJ6 765 aa8.16□□□□□ -1.1
GABPB1-211ENST00000561010 PLPP4Q5VZY2 271 aa8.16□□□□□ -1.1
GABPB1-211ENST00000561010 LLGL2Q6P1M3 1020 aa8.16□□□□□ -1.1
GABPB1-211ENST00000561010 RNF135Q8IUD6 432 aa8.16□□□□□ -1.1
GABPB1-211ENST00000561010 THNSL1Q8IYQ7 743 aa8.16□□□□□ -1.1
GABPB1-211ENST00000561010 LINC01465Q8N7H1 131 aa8.16□□□□□ -1.1
GABPB1-211ENST00000561010 SNIP1Q8TAD8 396 aaKnown RBP8.16□□□□□ -1.1
GABPB1-211ENST00000561010 FEZF2Q8TBJ5 459 aa8.16□□□□□ -1.1
GABPB1-211ENST00000561010 MICAL1Q8TDZ2 1067 aa8.16□□□□□ -1.1
GABPB1-211ENST00000561010 TBCKQ8TEA7 893 aa8.16□□□□□ -1.1
GABPB1-211ENST00000561010 MSLNLQ96KJ4 702 aa8.16□□□□□ -1.1
GABPB1-211ENST00000561010 CDK15Q96Q40 435 aa8.16□□□□□ -1.1
GABPB1-211ENST00000561010 KCTD15Q96SI1 283 aaPredicted RBP8.16□□□□□ -1.1
GABPB1-211ENST00000561010 RNF26Q9BY78 433 aaPredicted RBP8.16□□□□□ -1.1
GABPB1-211ENST00000561010 AGXT2Q9BYV1 514 aa8.16□□□□□ -1.1
GABPB1-211ENST00000561010 GLT8D2Q9H1C3 349 aa8.16□□□□□ -1.1
GABPB1-211ENST00000561010 ADAMTS10Q9H324 1103 aa8.16□□□□□ -1.1
GABPB1-211ENST00000561010 DISC1Q9NRI5 854 aa8.16□□□□□ -1.1
GABPB1-211ENST00000561010 TBC1D22BQ9NU19 505 aa8.16□□□□□ -1.1
GABPB1-211ENST00000561010 KCNJ14Q9UNX9 436 aa8.16□□□□□ -1.1
GABPB1-211ENST00000561010 USP15Q9Y4E8 981 aaPredicted RBP8.16□□□□□ -1.1
GABPB1-211ENST00000561010 PCDHA10Q9Y5I2 948 aa8.16□□□□□ -1.1
GABPB1-211ENST00000561010 CACNA1HO95180 2353 aa8.15□□□□□ -1.1
GABPB1-211ENST00000561010 MYH15Q9Y2K3 1946 aa8.15□□□□□ -1.1
GABPB1-211ENST00000561010 WDR64B1ANS9 1081 aa8.15□□□□□ -1.1
GABPB1-211ENST00000561010 NT5C1B-RDH14C9J2C7 533 aa8.15□□□□□ -1.1
GABPB1-211ENST00000561010 GPR182O15218 404 aa8.15□□□□□ -1.1
GABPB1-211ENST00000561010 STBD1O95210 358 aa8.15□□□□□ -1.1
GABPB1-211ENST00000561010 ADH1CP00326 375 aa8.15□□□□□ -1.1
GABPB1-211ENST00000561010 RPLP2P05387 115 aaKnown RBP8.15□□□□□ -1.1
GABPB1-211ENST00000561010 IFNAR1P17181 557 aa8.15□□□□□ -1.1
GABPB1-211ENST00000561010 ATF7P17544 494 aaPredicted RBP8.15□□□□□ -1.1
GABPB1-211ENST00000561010 FSHRP23945 695 aa8.15□□□□□ -1.1
GABPB1-211ENST00000561010 GNA11P29992 359 aa8.15□□□□□ -1.1
GABPB1-211ENST00000561010 GPC3P51654 580 aa8.15□□□□□ -1.1
GABPB1-211ENST00000561010 SSRP1Q08945 709 aaKnown RBP8.15□□□□□ -1.1
GABPB1-211ENST00000561010 NPY5RQ15761 445 aa8.15□□□□□ -1.1
GABPB1-211ENST00000561010 PLA2G4FQ68DD2 849 aa8.15□□□□□ -1.1
GABPB1-211ENST00000561010 HFE2Q6ZVN8 426 aa8.15□□□□□ -1.1
GABPB1-211ENST00000561010 SLC24A5Q71RS6 500 aa8.15□□□□□ -1.1
GABPB1-211ENST00000561010 RUFY3Q7L099 469 aa8.15□□□□□ -1.1
GABPB1-211ENST00000561010 ECHDC2Q86YB7 292 aa8.15□□□□□ -1.1
GABPB1-211ENST00000561010 KSR1Q8IVT5 923 aa8.15□□□□□ -1.1
GABPB1-211ENST00000561010 EFHBQ8N7U6 833 aa8.15□□□□□ -1.1
GABPB1-211ENST00000561010 CCDC12Q8WUD4 166 aaPredicted RBP8.15□□□□□ -1.1
GABPB1-211ENST00000561010 SLC5A5Q92911 643 aa8.15□□□□□ -1.1
GABPB1-211ENST00000561010 TNPO1Q92973 898 aaKnown RBP8.15□□□□□ -1.1
GABPB1-211ENST00000561010 LPPQ93052 612 aa8.15□□□□□ -1.1
GABPB1-211ENST00000561010 CCDC97Q96F63 343 aaPredicted RBP8.15□□□□□ -1.1
GABPB1-211ENST00000561010 SCLT1Q96NL6 688 aa8.15□□□□□ -1.1
GABPB1-211ENST00000561010 CASD1Q96PB1 797 aa8.15□□□□□ -1.1
GABPB1-211ENST00000561010 TEKT3Q9BXF9 490 aa8.15□□□□□ -1.1
GABPB1-211ENST00000561010 TLE6Q9H808 572 aa8.15□□□□□ -1.1
GABPB1-211ENST00000561010 ATP6V0A4Q9HBG4 840 aa8.15□□□□□ -1.1
GABPB1-211ENST00000561010 TLR9Q9NR96 1032 aa8.15□□□□□ -1.1
GABPB1-211ENST00000561010 C1orf112Q9NSG2 853 aa8.15□□□□□ -1.1
GABPB1-211ENST00000561010 PCDHB12Q9Y5F1 795 aa8.15□□□□□ -1.1
GABPB1-211ENST00000561010 WASF2Q9Y6W5 498 aa8.15□□□□□ -1.1
GABPB1-211ENST00000561010 MEIS3P2A8K0S8 358 aa8.14□□□□□ -1.11
GABPB1-211ENST00000561010 HIDE1A8MVS5 230 aa8.14□□□□□ -1.11
GABPB1-211ENST00000561010 PRR33A8MZF0 331 aa8.14□□□□□ -1.11
GABPB1-211ENST00000561010 EML1O00423 815 aa8.14□□□□□ -1.11
GABPB1-211ENST00000561010 WIPF1O43516 503 aa8.14□□□□□ -1.11
GABPB1-211ENST00000561010 SLC37A4O43826 429 aa8.14□□□□□ -1.11
GABPB1-211ENST00000561010 PSMD10O75832 226 aa8.14□□□□□ -1.11
GABPB1-211ENST00000561010 WFS1O76024 890 aa8.14□□□□□ -1.11
GABPB1-211ENST00000561010 FAM189BP81408 668 aa8.14□□□□□ -1.11
GABPB1-211ENST00000561010 INF2Q27J81 1249 aa8.14□□□□□ -1.11
GABPB1-211ENST00000561010 KANK3Q6NY19 840 aa8.14□□□□□ -1.11
GABPB1-211ENST00000561010 MIER3Q7Z3K6 550 aa8.14□□□□□ -1.11
GABPB1-211ENST00000561010 SMAP1Q8IYB5 467 aaPredicted RBP8.14□□□□□ -1.11
GABPB1-211ENST00000561010 BLIDQ8IZY5 108 aa8.14□□□□□ -1.11
GABPB1-211ENST00000561010 SMRP1Q8NCR6 262 aa8.14□□□□□ -1.11
GABPB1-211ENST00000561010 CCDC148Q8NFR7 591 aa8.14□□□□□ -1.11
GABPB1-211ENST00000561010 HELQQ8TDG4 1101 aa8.14□□□□□ -1.11
GABPB1-211ENST00000561010 AUTS2Q8WXX7 1259 aa8.14□□□□□ -1.11
GABPB1-211ENST00000561010 RPGRIP1Q96KN7 1286 aa8.14□□□□□ -1.11
GABPB1-211ENST00000561010 CEP89Q96ST8 783 aa8.14□□□□□ -1.11
GABPB1-211ENST00000561010 MAP7D2Q96T17 732 aa8.14□□□□□ -1.11
GABPB1-211ENST00000561010 TMEM161AQ9NX61 479 aa8.14□□□□□ -1.11
GABPB1-211ENST00000561010 PRKAG3Q9UGI9 489 aa8.14□□□□□ -1.11
GABPB1-211ENST00000561010 PCDHA4Q9UN74 947 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms