RNA–Protein interactions for RNA: ENST00000560853.5

LINC00593-202, long intergenic non-protein coding RNA 593, humanhuman

TSL 1 (best) BASIC

Gene LINC00593, Length 1,483 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00593-202ENST00000560853 CATSPER3Q86XQ3 398 aa16.68■□□□□ 0.26
LINC00593-202ENST00000560853 RSPH1Q8WYR4 309 aa16.68■□□□□ 0.26
LINC00593-202ENST00000560853 POP1Q99575 1024 aaKnown RBP16.68■□□□□ 0.26
LINC00593-202ENST00000560853 LRFN3Q9BTN0 628 aa16.68■□□□□ 0.26
LINC00593-202ENST00000560853 NRDE2Q9H7Z3 1164 aa16.68■□□□□ 0.26
LINC00593-202ENST00000560853 FSD2A1L4K1 749 aa16.67■□□□□ 0.26
LINC00593-202ENST00000560853 TSPAN1O60635 241 aa16.67■□□□□ 0.26
LINC00593-202ENST00000560853 MED24O75448 989 aa16.67■□□□□ 0.26
LINC00593-202ENST00000560853 XRCC6P12956 609 aaKnown RBP eCLIP16.67■□□□□ 0.26
LINC00593-202ENST00000560853 GLRA2P23416 452 aa16.67■□□□□ 0.26
LINC00593-202ENST00000560853 ARL2P36404 184 aa16.67■□□□□ 0.26
LINC00593-202ENST00000560853 CAPSQ13938 189 aa16.67■□□□□ 0.26
LINC00593-202ENST00000560853 MRPL10Q7Z7H8 261 aaKnown RBP16.67■□□□□ 0.26
LINC00593-202ENST00000560853 TMEM173Q86WV6 379 aaPredicted RBP16.67■□□□□ 0.26
LINC00593-202ENST00000560853 NOSTRINQ8IVI9 506 aa16.67■□□□□ 0.26
LINC00593-202ENST00000560853 URGCPQ8TCY9 931 aa16.67■□□□□ 0.26
LINC00593-202ENST00000560853 CPB2Q96IY4 423 aa16.67■□□□□ 0.26
LINC00593-202ENST00000560853 POLR3FQ9H1D9 316 aaPredicted RBP16.67■□□□□ 0.26
LINC00593-202ENST00000560853 RSAD1Q9HA92 442 aa16.67■□□□□ 0.26
LINC00593-202ENST00000560853 TUFT1Q9NNX1 390 aa16.67■□□□□ 0.26
LINC00593-202ENST00000560853 TRIOO75962 3097 aa16.67■□□□□ 0.26
LINC00593-202ENST00000560853 CD2BP2O95400 341 aaKnown RBP16.67■□□□□ 0.26
LINC00593-202ENST00000560853 GALTP07902 379 aa16.67■□□□□ 0.26
LINC00593-202ENST00000560853 SRGAP2BP0DMP2 458 aa16.67■□□□□ 0.26
LINC00593-202ENST00000560853 MBTD1Q05BQ5 628 aa16.67■□□□□ 0.26
LINC00593-202ENST00000560853 NCBP1Q09161 790 aaKnown RBP16.67■□□□□ 0.26
LINC00593-202ENST00000560853 ORC2Q13416 577 aaPredicted RBP16.67■□□□□ 0.26
LINC00593-202ENST00000560853 NBR1Q14596 966 aa16.67■□□□□ 0.26
LINC00593-202ENST00000560853 SMC1AQ14683 1233 aaKnown RBP16.67■□□□□ 0.26
LINC00593-202ENST00000560853 ERMNQ8TAM6 284 aa16.67■□□□□ 0.26
LINC00593-202ENST00000560853 EIF2AQ9BY44 585 aaKnown RBP16.67■□□□□ 0.26
LINC00593-202ENST00000560853 C11orf16Q9NQ32 467 aa16.67■□□□□ 0.26
LINC00593-202ENST00000560853 GPRC5CQ9NQ84 441 aa16.67■□□□□ 0.26
LINC00593-202ENST00000560853 DNAJB4Q9UDY4 337 aa16.67■□□□□ 0.26
LINC00593-202ENST00000560853 NOL7Q9UMY1 257 aaKnown RBP16.67■□□□□ 0.26
LINC00593-202ENST00000560853 USP15Q9Y4E8 981 aaPredicted RBP16.67■□□□□ 0.26
LINC00593-202ENST00000560853 ALADP13716 330 aa16.66■□□□□ 0.26
LINC00593-202ENST00000560853 AFF1P51825 1210 aaKnown RBP16.66■□□□□ 0.26
LINC00593-202ENST00000560853 POU5F1BQ06416 359 aa16.66■□□□□ 0.26
LINC00593-202ENST00000560853 BMS1Q14692 1282 aaKnown RBP16.66■□□□□ 0.26
LINC00593-202ENST00000560853 PCBP1Q15365 356 aaKnown RBP eCLIP16.66■□□□□ 0.26
LINC00593-202ENST00000560853 NOTUMQ6P988 496 aa16.66■□□□□ 0.26
LINC00593-202ENST00000560853 POTEGQ6S5H5 508 aa16.66■□□□□ 0.26
LINC00593-202ENST00000560853 ZNF280BQ86YH2 543 aa16.66■□□□□ 0.26
LINC00593-202ENST00000560853 IFNLR1Q8IU57 520 aaPredicted RBP16.66■□□□□ 0.26
LINC00593-202ENST00000560853 VPS52Q8N1B4 723 aa16.66■□□□□ 0.26
LINC00593-202ENST00000560853 MRPL43Q8N983 215 aaKnown RBP16.66■□□□□ 0.26
LINC00593-202ENST00000560853 IGSF21Q96ID5 467 aa16.66■□□□□ 0.26
LINC00593-202ENST00000560853 NACC1Q96RE7 527 aa16.66■□□□□ 0.26
LINC00593-202ENST00000560853 POLR3CQ9BUI4 534 aaPredicted RBP16.66■□□□□ 0.26
LINC00593-202ENST00000560853 IPPQ9Y573 584 aa16.66■□□□□ 0.26
LINC00593-202ENST00000560853 CNTNAP2Q9UHC6 1331 aa16.65■□□□□ 0.26
LINC00593-202ENST00000560853 C2orf71A6NGG8 1288 aa16.65■□□□□ 0.26
LINC00593-202ENST00000560853 DCXO43602 365 aa16.65■□□□□ 0.26
LINC00593-202ENST00000560853 B4GALT3O60512 393 aa16.65■□□□□ 0.26
LINC00593-202ENST00000560853 GPR37L1O60883 481 aa16.65■□□□□ 0.26
LINC00593-202ENST00000560853 CXCL14O95715 111 aa16.65■□□□□ 0.26
LINC00593-202ENST00000560853 POMCP01189 267 aa16.65■□□□□ 0.26
LINC00593-202ENST00000560853 ITGA4P13612 1032 aa16.65■□□□□ 0.26
LINC00593-202ENST00000560853 NCLP19338 710 aaKnown RBP16.65■□□□□ 0.26
LINC00593-202ENST00000560853 AXLP30530 894 aa16.65■□□□□ 0.26
LINC00593-202ENST00000560853 TRAPPC10P48553 1259 aa16.65■□□□□ 0.26
LINC00593-202ENST00000560853 SLC11A1P49279 550 aa16.65■□□□□ 0.26
LINC00593-202ENST00000560853 KCNC3Q14003 757 aa16.65■□□□□ 0.26
LINC00593-202ENST00000560853 SMG8Q8ND04 991 aaKnown RBP16.65■□□□□ 0.26
LINC00593-202ENST00000560853 CNNM3Q8NE01 707 aa16.65■□□□□ 0.26
LINC00593-202ENST00000560853 BCL7CQ8WUZ0 217 aaPredicted RBP16.65■□□□□ 0.26
LINC00593-202ENST00000560853 AUTS2Q8WXX7 1259 aa16.65■□□□□ 0.26
LINC00593-202ENST00000560853 CCDC51Q96ER9 411 aa16.65■□□□□ 0.26
LINC00593-202ENST00000560853 FAM193BQ96PV7 902 aaPredicted RBP16.65■□□□□ 0.26
LINC00593-202ENST00000560853 APOL5Q9BWW9 433 aa16.65■□□□□ 0.26
LINC00593-202ENST00000560853 DBR1Q9UK59 544 aaKnown RBP16.65■□□□□ 0.26
LINC00593-202ENST00000560853 HES2Q9Y543 173 aa16.65■□□□□ 0.26
LINC00593-202ENST00000560853 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.64■□□□□ 0.25
LINC00593-202ENST00000560853 CARNS1A5YM72 827 aa16.64■□□□□ 0.25
LINC00593-202ENST00000560853 LRRIQ4A6NIV6 560 aa16.64■□□□□ 0.25
LINC00593-202ENST00000560853 ST18O60284 1047 aa16.64■□□□□ 0.25
LINC00593-202ENST00000560853 DDHD2O94830 711 aa16.64■□□□□ 0.25
LINC00593-202ENST00000560853 ARF4P18085 180 aaPredicted RBP16.64■□□□□ 0.25
LINC00593-202ENST00000560853 RPA1P27694 616 aa16.64■□□□□ 0.25
LINC00593-202ENST00000560853 AMHR2Q16671 573 aa16.64■□□□□ 0.25
LINC00593-202ENST00000560853 ANKRD54Q6NXT1 300 aa16.64■□□□□ 0.25
LINC00593-202ENST00000560853 TMEM184AQ6ZMB5 413 aa16.64■□□□□ 0.25
LINC00593-202ENST00000560853 DDX53Q86TM3 631 aaKnown RBP16.64■□□□□ 0.25
LINC00593-202ENST00000560853 TMEM87AQ8NBN3 555 aa16.64■□□□□ 0.25
LINC00593-202ENST00000560853 MCPH1Q8NEM0 835 aa16.64■□□□□ 0.25
LINC00593-202ENST00000560853 APOL6Q9BWW8 343 aa16.64■□□□□ 0.25
LINC00593-202ENST00000560853 NFKBIZQ9BYH8 718 aa16.64■□□□□ 0.25
LINC00593-202ENST00000560853 TRIM6Q9C030 488 aaPredicted RBP16.64■□□□□ 0.25
LINC00593-202ENST00000560853 ZBP1Q9H171 429 aa16.64■□□□□ 0.25
LINC00593-202ENST00000560853 CSRNP2Q9H175 543 aa16.64■□□□□ 0.25
LINC00593-202ENST00000560853 RNF39Q9H2S5 420 aa16.64■□□□□ 0.25
LINC00593-202ENST00000560853 KANSL3Q9P2N6 904 aa16.64■□□□□ 0.25
LINC00593-202ENST00000560853 ARHGEF35A5YM69 484 aa16.63■□□□□ 0.25
LINC00593-202ENST00000560853 B4GALT5O43286 388 aa16.63■□□□□ 0.25
LINC00593-202ENST00000560853 CLASP2O75122 1294 aaKnown RBP16.63■□□□□ 0.25
LINC00593-202ENST00000560853 U2AF2P26368 475 aaKnown RBP eCLIP16.63■□□□□ 0.25
LINC00593-202ENST00000560853 CDR2LQ86X02 465 aaPredicted RBP16.63■□□□□ 0.25
LINC00593-202ENST00000560853 C4orf32Q8N8J7 132 aa16.63■□□□□ 0.25
LINC00593-202ENST00000560853 GAD1Q99259 594 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms