RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 KDF1Q8NAX2 398 aaPredicted RBP7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 KCNH5Q8NCM2 988 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 SMC1BQ8NDV3 1235 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 EZH1Q92800 747 aaPredicted RBP7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 BRF1Q92994 677 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 C18orf8Q96DM3 657 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 B3GNT5Q9BYG0 378 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 RNF38Q9H0F5 515 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 CENPHQ9H3R5 247 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 TCF7L1Q9HCS4 588 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 APOBEC2Q9Y235 224 aaKnown RBP7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 A0A1B0GVC2 190 aa7.34□□□□□ -1.24
TSPAN3-209ENST00000560715 TCRBV16S1A1N1A0A5B0 115 aa7.34□□□□□ -1.24
TSPAN3-209ENST00000560715 C19orf67A6NJJ6 358 aa7.34□□□□□ -1.24
TSPAN3-209ENST00000560715 ZNF202O95125 648 aa7.34□□□□□ -1.24
TSPAN3-209ENST00000560715 PDHBP11177 359 aa7.34□□□□□ -1.24
TSPAN3-209ENST00000560715 VEGFAP15692 232 aaPredicted RBP7.34□□□□□ -1.24
TSPAN3-209ENST00000560715 GNGT1P63211 74 aa7.34□□□□□ -1.24
TSPAN3-209ENST00000560715 DRP2Q13474 957 aa7.34□□□□□ -1.24
TSPAN3-209ENST00000560715 RRP12Q5JTH9 1297 aaKnown RBP7.34□□□□□ -1.24
TSPAN3-209ENST00000560715 SPATA21Q7Z572 469 aa7.34□□□□□ -1.24
TSPAN3-209ENST00000560715 CHTF18Q8WVB6 975 aa7.34□□□□□ -1.24
TSPAN3-209ENST00000560715 OSMRQ99650 979 aa7.34□□□□□ -1.24
TSPAN3-209ENST00000560715 STRN4Q9NRL3 753 aa7.34□□□□□ -1.24
TSPAN3-209ENST00000560715 TOPORSQ9NS56 1045 aaPredicted RBP7.34□□□□□ -1.24
TSPAN3-209ENST00000560715 SAMD15Q9P1V8 674 aa7.34□□□□□ -1.24
TSPAN3-209ENST00000560715 BLOC1S6Q9UL45 172 aa7.34□□□□□ -1.24
TSPAN3-209ENST00000560715 GPR34Q9UPC5 381 aa7.34□□□□□ -1.24
TSPAN3-209ENST00000560715 TRPM3Q9HCF6 1732 aaPredicted RBP7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 NDUFAB1O14561 156 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 ARIH2O95376 493 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 RHOXF2BP0C7M4 288 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 COPAP53621 1224 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 LAMB3Q13751 1172 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 TAF12Q16514 161 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 INTS11Q5TA45 600 aaKnown RBP7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 NUTM2GQ5VZR2 741 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 MIS18BP1Q6P0N0 1132 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 CYB5D1Q6P9G0 228 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 XKR5Q6UX68 686 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 TMTC1Q8IUR5 882 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 MFN1Q8IWA4 741 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 NRSN1Q8IZ57 195 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 IP6K1Q92551 441 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 AIFM3Q96NN9 605 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 SH3GL2Q99962 352 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 RHOXF2Q9BQY4 288 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 MRPL4Q9BYD3 311 aaKnown RBP7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 SLC39A2Q9NP94 309 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 FNDC3AQ9Y2H6 1198 aaKnown RBP7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 SLIT3O75094 1523 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 A0A087WWV3 80 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 RPSAP08865 295 aaKnown RBP7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 IGFALSP35858 605 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 LIFRP42702 1097 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 STIM1Q13586 685 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 POSTNQ15063 836 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 AMOTQ4VCS5 1084 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 COL13A1Q5TAT6 717 aaPredicted RBP7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 THEMIS2Q5TEJ8 643 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 KLHDC7AQ5VTJ3 777 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 ZNF227Q86WZ6 799 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 BTN2A2Q8WVV5 523 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 OSBPL9Q96SU4 736 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 RMDN3Q96TC7 470 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 GPATCH1Q9BRR8 931 aaKnown RBP7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 LRRCC1Q9C099 1032 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 IL25Q9H293 177 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 ATP8A2Q9NTI2 1148 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 BABAM1Q9NWV8 329 aa7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.33□□□□□ -1.24
TSPAN3-209ENST00000560715 ERICH2A1L162 156 aa7.32□□□□□ -1.24
TSPAN3-209ENST00000560715 IQCA1LA6NCM1 817 aa7.32□□□□□ -1.24
TSPAN3-209ENST00000560715 FIGNL2A6NMB9 653 aa7.32□□□□□ -1.24
TSPAN3-209ENST00000560715 AGRPO00253 132 aa7.32□□□□□ -1.24
TSPAN3-209ENST00000560715 ZSCAN9O15535 394 aaPredicted RBP7.32□□□□□ -1.24
TSPAN3-209ENST00000560715 ZEB2O60315 1214 aa7.32□□□□□ -1.24
TSPAN3-209ENST00000560715 SMNDC1O75940 238 aaKnown RBP eCLIP7.32□□□□□ -1.24
TSPAN3-209ENST00000560715 CLTBP09497 229 aa7.32□□□□□ -1.24
TSPAN3-209ENST00000560715 RAC2P15153 192 aa7.32□□□□□ -1.24
TSPAN3-209ENST00000560715 NAT1P18440 290 aa7.32□□□□□ -1.24
TSPAN3-209ENST00000560715 KRT9P35527 623 aa7.32□□□□□ -1.24
TSPAN3-209ENST00000560715 GGCXP38435 758 aa7.32□□□□□ -1.24
TSPAN3-209ENST00000560715 IFFO1Q0D2I5 559 aa7.32□□□□□ -1.24
TSPAN3-209ENST00000560715 FAM209BQ5JX69 171 aa7.32□□□□□ -1.24
TSPAN3-209ENST00000560715 DCAF15Q66K64 600 aa7.32□□□□□ -1.24
TSPAN3-209ENST00000560715 CWF19L1Q69YN2 538 aaKnown RBP7.32□□□□□ -1.24
TSPAN3-209ENST00000560715 GALNT17Q6IS24 598 aa7.32□□□□□ -1.24
TSPAN3-209ENST00000560715 LILRA6Q6PI73 481 aa7.32□□□□□ -1.24
TSPAN3-209ENST00000560715 SLC30A9Q6PML9 568 aa7.32□□□□□ -1.24
TSPAN3-209ENST00000560715 CYP26C1Q6V0L0 522 aa7.32□□□□□ -1.24
TSPAN3-209ENST00000560715 ILDR2Q71H61 639 aa7.32□□□□□ -1.24
TSPAN3-209ENST00000560715 BTLAQ7Z6A9 289 aa7.32□□□□□ -1.24
TSPAN3-209ENST00000560715 TMEM40Q8WWA1 233 aa7.32□□□□□ -1.24
TSPAN3-209ENST00000560715 HDAC2Q92769 488 aaKnown RBP7.32□□□□□ -1.24
TSPAN3-209ENST00000560715 CENPTQ96BT3 561 aa7.32□□□□□ -1.24
TSPAN3-209ENST00000560715 PLEKHG4BQ96PX9 1271 aa7.32□□□□□ -1.24
TSPAN3-209ENST00000560715 TLR7Q9NYK1 1049 aaKnown RBP7.32□□□□□ -1.24
TSPAN3-209ENST00000560715 RGL1Q9NZL6 768 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms