RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 ZNF398Q8TD17 642 aa17.25■□□□□ 0.35
PBX1-219ENST00000560641 ALG3Q92685 438 aa17.25■□□□□ 0.35
PBX1-219ENST00000560641 FGFBP2Q9BYJ0 223 aa17.25■□□□□ 0.35
PBX1-219ENST00000560641 OSGEPQ9NPF4 335 aa17.25■□□□□ 0.35
PBX1-219ENST00000560641 EMILIN3Q9NT22 766 aa17.25■□□□□ 0.35
PBX1-219ENST00000560641 SCOCQ9UIL1 159 aa17.25■□□□□ 0.35
PBX1-219ENST00000560641 COL5A2P05997 1499 aaPredicted RBP17.24■□□□□ 0.35
PBX1-219ENST00000560641 IGHMBP2P38935 993 aaKnown RBP17.24■□□□□ 0.35
PBX1-219ENST00000560641 STAT1P42224 750 aa17.24■□□□□ 0.35
PBX1-219ENST00000560641 FOXB2Q5VYV0 432 aa17.24■□□□□ 0.35
PBX1-219ENST00000560641 NELFCDQ8IXH7 590 aa17.24■□□□□ 0.35
PBX1-219ENST00000560641 KLHL23Q8NBE8 558 aa17.24■□□□□ 0.35
PBX1-219ENST00000560641 TBC1D10AQ9BXI6 508 aa17.24■□□□□ 0.35
PBX1-219ENST00000560641 CDC42EP4Q9H3Q1 356 aaKnown RBP17.24■□□□□ 0.35
PBX1-219ENST00000560641 BMP2KQ9NSY1 1161 aaPredicted RBP17.24■□□□□ 0.35
PBX1-219ENST00000560641 CHKBQ9Y259 395 aa17.24■□□□□ 0.35
PBX1-219ENST00000560641 TBC1D30Q9Y2I9 924 aa17.24■□□□□ 0.35
PBX1-219ENST00000560641 PASKQ96RG2 1323 aa17.24■□□□□ 0.35
PBX1-219ENST00000560641 MAPK13O15264 365 aa17.24■□□□□ 0.35
PBX1-219ENST00000560641 NOVP48745 357 aa17.24■□□□□ 0.35
PBX1-219ENST00000560641 PABPC1LQ4VXU2 614 aaKnown RBP17.24■□□□□ 0.35
PBX1-219ENST00000560641 DPY19L2Q6NUT2 758 aa17.24■□□□□ 0.35
PBX1-219ENST00000560641 INTS8Q75QN2 995 aaKnown RBP17.24■□□□□ 0.35
PBX1-219ENST00000560641 REXO1Q8N1G1 1221 aaKnown RBP17.24■□□□□ 0.35
PBX1-219ENST00000560641 NUDT12Q9BQG2 462 aa17.24■□□□□ 0.35
PBX1-219ENST00000560641 UBN1Q9NPG3 1134 aa17.24■□□□□ 0.35
PBX1-219ENST00000560641 IRAK4Q9NWZ3 460 aa17.24■□□□□ 0.35
PBX1-219ENST00000560641 AJAP1Q9UKB5 411 aaPredicted RBP17.24■□□□□ 0.35
PBX1-219ENST00000560641 ANKRD62A6NC57 917 aa17.23■□□□□ 0.35
PBX1-219ENST00000560641 PDXKO00764 312 aa17.23■□□□□ 0.35
PBX1-219ENST00000560641 NVLO15381 856 aaKnown RBP17.23■□□□□ 0.35
PBX1-219ENST00000560641 CYP19A1P11511 503 aaPredicted RBP17.23■□□□□ 0.35
PBX1-219ENST00000560641 IMPDH2P12268 514 aa17.23■□□□□ 0.35
PBX1-219ENST00000560641 SH3BGRP55822 239 aaPredicted RBP17.23■□□□□ 0.35
PBX1-219ENST00000560641 EVX2Q03828 476 aa17.23■□□□□ 0.35
PBX1-219ENST00000560641 SIX1Q15475 284 aaPredicted RBP17.23■□□□□ 0.35
PBX1-219ENST00000560641 RBM12BQ8IXT5 1001 aaKnown RBP17.23■□□□□ 0.35
PBX1-219ENST00000560641 NR1H4Q96RI1 486 aaPredicted RBP17.23■□□□□ 0.35
PBX1-219ENST00000560641 LRRC19Q9H756 370 aa17.23■□□□□ 0.35
PBX1-219ENST00000560641 IGSF9BQ9UPX0 1349 aa17.23■□□□□ 0.35
PBX1-219ENST00000560641 TTC36A6NLP5 189 aa17.23■□□□□ 0.35
PBX1-219ENST00000560641 SOX5P35711 763 aa17.23■□□□□ 0.35
PBX1-219ENST00000560641 TFAP4Q01664 338 aa17.23■□□□□ 0.35
PBX1-219ENST00000560641 LRRC14Q15048 493 aa17.23■□□□□ 0.35
PBX1-219ENST00000560641 ECM1Q16610 540 aa17.23■□□□□ 0.35
PBX1-219ENST00000560641 C12orf60Q5U649 245 aa17.23■□□□□ 0.35
PBX1-219ENST00000560641 SYDE1Q6ZW31 735 aaPredicted RBP17.23■□□□□ 0.35
PBX1-219ENST00000560641 U2AF1L4Q8WU68 220 aaKnown RBP17.23■□□□□ 0.35
PBX1-219ENST00000560641 CTNNBL1Q8WYA6 563 aaPredicted RBP17.23■□□□□ 0.35
PBX1-219ENST00000560641 CYLDQ9NQC7 956 aa17.23■□□□□ 0.35
PBX1-219ENST00000560641 PCMTD2Q9NV79 361 aa17.23■□□□□ 0.35
PBX1-219ENST00000560641 NMRK1Q9NWW6 199 aa17.23■□□□□ 0.35
PBX1-219ENST00000560641 MAGEA13PA6NCF6 341 aa17.23■□□□□ 0.35
PBX1-219ENST00000560641 SLC37A4O43826 429 aa17.23■□□□□ 0.35
PBX1-219ENST00000560641 PTPN4P29074 926 aa17.23■□□□□ 0.35
PBX1-219ENST00000560641 COILP38432 576 aaPredicted RBP17.23■□□□□ 0.35
PBX1-219ENST00000560641 CAV1Q03135 178 aa17.23■□□□□ 0.35
PBX1-219ENST00000560641 GIT2Q14161 759 aa17.23■□□□□ 0.35
PBX1-219ENST00000560641 CCDC137Q6PK04 289 aaKnown RBP17.23■□□□□ 0.35
PBX1-219ENST00000560641 UBL4BQ8N7F7 174 aa17.23■□□□□ 0.35
PBX1-219ENST00000560641 CD101Q93033 1021 aa17.23■□□□□ 0.35
PBX1-219ENST00000560641 ZSWIM1Q9BR11 485 aa17.23■□□□□ 0.35
PBX1-219ENST00000560641 STK33Q9BYT3 514 aa17.23■□□□□ 0.35
PBX1-219ENST00000560641 ABCF2Q9UG63 623 aa17.23■□□□□ 0.35
PBX1-219ENST00000560641 CDK5RAP2Q96SN8 1893 aa17.22■□□□□ 0.35
PBX1-219ENST00000560641 COL24A1Q17RW2 1714 aa17.22■□□□□ 0.35
PBX1-219ENST00000560641 TTC4O95801 387 aa17.22■□□□□ 0.35
PBX1-219ENST00000560641 ZDHHC14Q8IZN3 488 aa17.22■□□□□ 0.35
PBX1-219ENST00000560641 PHF24Q9UPV7 400 aa17.22■□□□□ 0.35
PBX1-219ENST00000560641 SKIP12755 728 aa17.22■□□□□ 0.35
PBX1-219ENST00000560641 XRCC5P13010 732 aaKnown RBP17.22■□□□□ 0.35
PBX1-219ENST00000560641 NR2F2P24468 414 aa17.22■□□□□ 0.35
PBX1-219ENST00000560641 IL6STP40189 918 aaPredicted RBP17.22■□□□□ 0.35
PBX1-219ENST00000560641 SLCO1A2P46721 670 aa17.22■□□□□ 0.35
PBX1-219ENST00000560641 FGD4Q96M96 766 aa17.22■□□□□ 0.35
PBX1-219ENST00000560641 LRRC37BQ96QE4 947 aa17.22■□□□□ 0.35
PBX1-219ENST00000560641 DENND2DQ9H6A0 471 aaPredicted RBP17.22■□□□□ 0.35
PBX1-219ENST00000560641 ZWILCHQ9H900 591 aa17.22■□□□□ 0.35
PBX1-219ENST00000560641 CHCHD3Q9NX63 227 aaKnown RBP17.22■□□□□ 0.35
PBX1-219ENST00000560641 ROBO1Q9Y6N7 1651 aa17.21■□□□□ 0.35
PBX1-219ENST00000560641 SMIM23A6NLE4 172 aa17.21■□□□□ 0.35
PBX1-219ENST00000560641 PRPF4O43172 522 aaKnown RBP eCLIP17.21■□□□□ 0.35
PBX1-219ENST00000560641 COQ9O75208 318 aa17.21■□□□□ 0.35
PBX1-219ENST00000560641 BRAFP15056 766 aa17.21■□□□□ 0.35
PBX1-219ENST00000560641 STX2P32856 288 aa17.21■□□□□ 0.35
PBX1-219ENST00000560641 RFC5P40937 340 aa17.21■□□□□ 0.35
PBX1-219ENST00000560641 IL9RQ01113 521 aa17.21■□□□□ 0.35
PBX1-219ENST00000560641 PPP1R18Q6NYC8 613 aa17.21■□□□□ 0.35
PBX1-219ENST00000560641 SLC35C1Q96A29 364 aa17.21■□□□□ 0.35
PBX1-219ENST00000560641 PITPNM3Q9BZ71 974 aa17.21■□□□□ 0.35
PBX1-219ENST00000560641 TMOD3Q9NYL9 352 aa17.21■□□□□ 0.35
PBX1-219ENST00000560641 DLGAP2Q9P1A6 1054 aa17.21■□□□□ 0.35
PBX1-219ENST00000560641 ASMTLO95671 621 aa17.21■□□□□ 0.35
PBX1-219ENST00000560641 CREB1P16220 341 aa17.21■□□□□ 0.35
PBX1-219ENST00000560641 ITIH2P19823 946 aa17.21■□□□□ 0.35
PBX1-219ENST00000560641 NR1H3Q13133 447 aa17.21■□□□□ 0.35
PBX1-219ENST00000560641 KPNB1Q14974 876 aaKnown RBP17.21■□□□□ 0.35
PBX1-219ENST00000560641 LONRF1Q17RB8 773 aa17.21■□□□□ 0.35
PBX1-219ENST00000560641 SLC45A4Q5BKX6 768 aa17.21■□□□□ 0.35
PBX1-219ENST00000560641 C4orf50Q6ZRC1 276 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms