RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 CCDC105Q8IYK2 499 aa11.78□□□□□ -0.52
CDC42BPB-207ENST00000560492 DTWD2Q8NBA8 298 aa11.78□□□□□ -0.52
CDC42BPB-207ENST00000560492 FEZF2Q8TBJ5 459 aa11.78□□□□□ -0.52
CDC42BPB-207ENST00000560492 BCL7CQ8WUZ0 217 aaPredicted RBP11.78□□□□□ -0.52
CDC42BPB-207ENST00000560492 CRYGNQ8WXF5 182 aa11.78□□□□□ -0.52
CDC42BPB-207ENST00000560492 RSPH1Q8WYR4 309 aa11.78□□□□□ -0.52
CDC42BPB-207ENST00000560492 GJA10Q969M2 543 aa11.78□□□□□ -0.52
CDC42BPB-207ENST00000560492 SLC26A6Q9BXS9 759 aa11.78□□□□□ -0.52
CDC42BPB-207ENST00000560492 KCNK12Q9HB15 430 aa11.78□□□□□ -0.52
CDC42BPB-207ENST00000560492 MAN1C1Q9NR34 630 aa11.78□□□□□ -0.52
CDC42BPB-207ENST00000560492 CA14Q9ULX7 337 aa11.78□□□□□ -0.52
CDC42BPB-207ENST00000560492 DUSP12Q9UNI6 340 aa11.78□□□□□ -0.52
CDC42BPB-207ENST00000560492 FAN1Q9Y2M0 1017 aa11.78□□□□□ -0.52
CDC42BPB-207ENST00000560492 RIOK3O14730 519 aaKnown RBP11.77□□□□□ -0.53
CDC42BPB-207ENST00000560492 HMGB1P09429 215 aaKnown RBP11.77□□□□□ -0.53
CDC42BPB-207ENST00000560492 CNPP09543 421 aaKnown RBP11.77□□□□□ -0.53
CDC42BPB-207ENST00000560492 CPA1P15085 419 aa11.77□□□□□ -0.53
CDC42BPB-207ENST00000560492 CLCN4P51793 760 aa11.77□□□□□ -0.53
CDC42BPB-207ENST00000560492 NLRP5P59047 1200 aa11.77□□□□□ -0.53
CDC42BPB-207ENST00000560492 LETM2Q2VYF4 491 aa11.77□□□□□ -0.53
CDC42BPB-207ENST00000560492 XKR3Q5GH77 459 aa11.77□□□□□ -0.53
CDC42BPB-207ENST00000560492 Q6ZUG5 572 aa11.77□□□□□ -0.53
CDC42BPB-207ENST00000560492 ZNF410Q86VK4 478 aa11.77□□□□□ -0.53
CDC42BPB-207ENST00000560492 ZNF280BQ86YH2 543 aa11.77□□□□□ -0.53
CDC42BPB-207ENST00000560492 KSR1Q8IVT5 923 aa11.77□□□□□ -0.53
CDC42BPB-207ENST00000560492 RIN2Q8WYP3 895 aaPredicted RBP11.77□□□□□ -0.53
CDC42BPB-207ENST00000560492 STAMQ92783 540 aa11.77□□□□□ -0.53
CDC42BPB-207ENST00000560492 BRF1Q92994 677 aa11.77□□□□□ -0.53
CDC42BPB-207ENST00000560492 KLHL5Q96PQ7 755 aa11.77□□□□□ -0.53
CDC42BPB-207ENST00000560492 RIT2Q99578 217 aa11.77□□□□□ -0.53
CDC42BPB-207ENST00000560492 SLKQ9H2G2 1235 aaPredicted RBP11.77□□□□□ -0.53
CDC42BPB-207ENST00000560492 PIDD1Q9HB75 910 aa11.77□□□□□ -0.53
CDC42BPB-207ENST00000560492 FAM217BQ9NTX9 383 aaPredicted RBP11.77□□□□□ -0.53
CDC42BPB-207ENST00000560492 VPS54Q9P1Q0 977 aa11.77□□□□□ -0.53
CDC42BPB-207ENST00000560492 PRG3Q9Y2Y8 225 aaPredicted RBP11.77□□□□□ -0.53
CDC42BPB-207ENST00000560492 PCDHB2Q9Y5E7 798 aa11.77□□□□□ -0.53
CDC42BPB-207ENST00000560492 IRAK3Q9Y616 596 aa11.77□□□□□ -0.53
CDC42BPB-207ENST00000560492 PRPF3O43395 683 aaKnown RBP11.76□□□□□ -0.53
CDC42BPB-207ENST00000560492 NARSO43776 548 aaKnown RBP11.76□□□□□ -0.53
CDC42BPB-207ENST00000560492 OFD1O75665 1012 aa11.76□□□□□ -0.53
CDC42BPB-207ENST00000560492 POMCP01189 267 aa11.76□□□□□ -0.53
CDC42BPB-207ENST00000560492 ALDH2P05091 517 aa11.76□□□□□ -0.53
CDC42BPB-207ENST00000560492 ADH1AP07327 375 aa11.76□□□□□ -0.53
CDC42BPB-207ENST00000560492 CIITAP33076 1130 aa11.76□□□□□ -0.53
CDC42BPB-207ENST00000560492 OR1G1P47890 313 aa11.76□□□□□ -0.53
CDC42BPB-207ENST00000560492 RCAN1P53805 252 aa11.76□□□□□ -0.53
CDC42BPB-207ENST00000560492 PLA2G4FQ68DD2 849 aa11.76□□□□□ -0.53
CDC42BPB-207ENST00000560492 RSAD2Q8WXG1 361 aa11.76□□□□□ -0.53
CDC42BPB-207ENST00000560492 SLC5A5Q92911 643 aa11.76□□□□□ -0.53
CDC42BPB-207ENST00000560492 LENG9Q96B70 501 aa11.76□□□□□ -0.53
CDC42BPB-207ENST00000560492 JPH2Q9BR39 696 aaPredicted RBP11.76□□□□□ -0.53
CDC42BPB-207ENST00000560492 RSAD1Q9HA92 442 aa11.76□□□□□ -0.53
CDC42BPB-207ENST00000560492 IGSF9Q9P2J2 1179 aa11.76□□□□□ -0.53
CDC42BPB-207ENST00000560492 STK39Q9UEW8 545 aa11.76□□□□□ -0.53
CDC42BPB-207ENST00000560492 R4GN57 208 aa11.76□□□□□ -0.53
CDC42BPB-207ENST00000560492 MIA3Q5JRA6 1907 aa11.76□□□□□ -0.53
CDC42BPB-207ENST00000560492 MTCL1Q9Y4B5 1905 aaKnown RBP11.76□□□□□ -0.53
CDC42BPB-207ENST00000560492 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.75□□□□□ -0.53
CDC42BPB-207ENST00000560492 CCDC195A0A1B0GUA6 201 aa11.75□□□□□ -0.53
CDC42BPB-207ENST00000560492 INPPL1O15357 1258 aa11.75□□□□□ -0.53
CDC42BPB-207ENST00000560492 GLUD1P00367 558 aa11.75□□□□□ -0.53
CDC42BPB-207ENST00000560492 SRGAP2CP0DJJ0 459 aa11.75□□□□□ -0.53
CDC42BPB-207ENST00000560492 NPR3P17342 541 aa11.75□□□□□ -0.53
CDC42BPB-207ENST00000560492 TARBP2Q15633 366 aaKnown RBP11.75□□□□□ -0.53
CDC42BPB-207ENST00000560492 BLOC1S2Q6QNY1 142 aa11.75□□□□□ -0.53
CDC42BPB-207ENST00000560492 C15orf39Q6ZRI6 1047 aa11.75□□□□□ -0.53
CDC42BPB-207ENST00000560492 GLYCTKQ8IVS8 523 aa11.75□□□□□ -0.53
CDC42BPB-207ENST00000560492 KIAA2013Q8IYS2 634 aa11.75□□□□□ -0.53
CDC42BPB-207ENST00000560492 RDM1Q8NG50 284 aa11.75□□□□□ -0.53
CDC42BPB-207ENST00000560492 TBCKQ8TEA7 893 aa11.75□□□□□ -0.53
CDC42BPB-207ENST00000560492 SLC7A3Q8WY07 619 aa11.75□□□□□ -0.53
CDC42BPB-207ENST00000560492 SMG7Q92540 1137 aaKnown RBP11.75□□□□□ -0.53
CDC42BPB-207ENST00000560492 JAKMIP1Q96N16 626 aaKnown RBP11.75□□□□□ -0.53
CDC42BPB-207ENST00000560492 VN1R3Q9BXE9 311 aa11.75□□□□□ -0.53
CDC42BPB-207ENST00000560492 NIFKQ9BYG3 293 aaKnown RBP11.75□□□□□ -0.53
CDC42BPB-207ENST00000560492 KANSL3Q9P2N6 904 aa11.75□□□□□ -0.53
CDC42BPB-207ENST00000560492 DPP7Q9UHL4 492 aa11.75□□□□□ -0.53
CDC42BPB-207ENST00000560492 SSX2IPQ9Y2D8 614 aa11.75□□□□□ -0.53
CDC42BPB-207ENST00000560492 COL4A3BPQ9Y5P4 624 aa11.75□□□□□ -0.53
CDC42BPB-207ENST00000560492 CLUHO75153 1309 aa11.75□□□□□ -0.53
CDC42BPB-207ENST00000560492 ARID2Q68CP9 1835 aa11.74□□□□□ -0.53
CDC42BPB-207ENST00000560492 NRP1O14786 923 aa11.74□□□□□ -0.53
CDC42BPB-207ENST00000560492 MARCH6O60337 910 aa11.74□□□□□ -0.53
CDC42BPB-207ENST00000560492 B4GALT3O60512 393 aa11.74□□□□□ -0.53
CDC42BPB-207ENST00000560492 DDHD2O94830 711 aa11.74□□□□□ -0.53
CDC42BPB-207ENST00000560492 ERLIN2O94905 339 aa11.74□□□□□ -0.53
CDC42BPB-207ENST00000560492 TDP2O95551 362 aa11.74□□□□□ -0.53
CDC42BPB-207ENST00000560492 LMNAP02545 664 aaKnown RBP11.74□□□□□ -0.53
CDC42BPB-207ENST00000560492 SPATA31D3P0C874 917 aa11.74□□□□□ -0.53
CDC42BPB-207ENST00000560492 ITGA4P13612 1032 aa11.74□□□□□ -0.53
CDC42BPB-207ENST00000560492 USP11P51784 963 aa11.74□□□□□ -0.53
CDC42BPB-207ENST00000560492 CCT2P78371 535 aaKnown RBP11.74□□□□□ -0.53
CDC42BPB-207ENST00000560492 AGMOQ6ZNB7 445 aa11.74□□□□□ -0.53
CDC42BPB-207ENST00000560492 SPATA31D4Q6ZUB0 917 aa11.74□□□□□ -0.53
CDC42BPB-207ENST00000560492 GET4Q7L5D6 327 aaPredicted RBP11.74□□□□□ -0.53
CDC42BPB-207ENST00000560492 TMEM175Q9BSA9 504 aa11.74□□□□□ -0.53
CDC42BPB-207ENST00000560492 TRAIPQ9BWF2 469 aa11.74□□□□□ -0.53
CDC42BPB-207ENST00000560492 APOL6Q9BWW8 343 aa11.74□□□□□ -0.53
CDC42BPB-207ENST00000560492 C22orf23Q9BZE7 217 aa11.74□□□□□ -0.53
CDC42BPB-207ENST00000560492 TBC1D17Q9HA65 648 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms