RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 CNNM3Q8NE01 707 aa15.13■□□□□ 0.01
SMAD3-214ENST00000560402 IGSF21Q96ID5 467 aa15.13■□□□□ 0.01
SMAD3-214ENST00000560402 RIPOR3Q96MK2 946 aa15.13■□□□□ 0.01
SMAD3-214ENST00000560402 ZSWIM4Q9H7M6 989 aa15.13■□□□□ 0.01
SMAD3-214ENST00000560402 TBC1D13Q9NVG8 400 aa15.13■□□□□ 0.01
SMAD3-214ENST00000560402 ORC3Q9UBD5 711 aaPredicted RBP15.13■□□□□ 0.01
SMAD3-214ENST00000560402 TDRD15B5MCY1 1934 aaKnown RBP15.13■□□□□ 0.01
SMAD3-214ENST00000560402 NT5C1B-RDH14C9J2C7 533 aa15.12■□□□□ 0.01
SMAD3-214ENST00000560402 YWHABP31946 246 aaKnown RBP15.12■□□□□ 0.01
SMAD3-214ENST00000560402 MCM4P33991 863 aa15.12■□□□□ 0.01
SMAD3-214ENST00000560402 CA8P35219 290 aa15.12■□□□□ 0.01
SMAD3-214ENST00000560402 KRT2P35908 639 aa15.12■□□□□ 0.01
SMAD3-214ENST00000560402 AK2P54819 239 aa15.12■□□□□ 0.01
SMAD3-214ENST00000560402 NPEPPSP55786 919 aa15.12■□□□□ 0.01
SMAD3-214ENST00000560402 SPIRE1Q08AE8 756 aa15.12■□□□□ 0.01
SMAD3-214ENST00000560402 EMC2Q15006 297 aa15.12■□□□□ 0.01
SMAD3-214ENST00000560402 NCAPH2Q6IBW4 605 aa15.12■□□□□ 0.01
SMAD3-214ENST00000560402 KIAA1841Q6NSI8 718 aa15.12■□□□□ 0.01
SMAD3-214ENST00000560402 PPFIBP1Q86W92 1011 aa15.12■□□□□ 0.01
SMAD3-214ENST00000560402 KSR1Q8IVT5 923 aa15.12■□□□□ 0.01
SMAD3-214ENST00000560402 VPS52Q8N1B4 723 aa15.12■□□□□ 0.01
SMAD3-214ENST00000560402 FBXL6Q8N531 539 aa15.12■□□□□ 0.01
SMAD3-214ENST00000560402 TMEM87AQ8NBN3 555 aa15.12■□□□□ 0.01
SMAD3-214ENST00000560402 HAS1Q92839 578 aa15.12■□□□□ 0.01
SMAD3-214ENST00000560402 LPPQ93052 612 aa15.12■□□□□ 0.01
SMAD3-214ENST00000560402 PBXIP1Q96AQ6 731 aa15.12■□□□□ 0.01
SMAD3-214ENST00000560402 CCDC51Q96ER9 411 aa15.12■□□□□ 0.01
SMAD3-214ENST00000560402 MTRQ99707 1265 aa15.12■□□□□ 0.01
SMAD3-214ENST00000560402 TMEM175Q9BSA9 504 aa15.12■□□□□ 0.01
SMAD3-214ENST00000560402 ADAM7Q9H2U9 754 aa15.12■□□□□ 0.01
SMAD3-214ENST00000560402 NRDE2Q9H7Z3 1164 aa15.12■□□□□ 0.01
SMAD3-214ENST00000560402 RSAD1Q9HA92 442 aa15.12■□□□□ 0.01
SMAD3-214ENST00000560402 KANSL3Q9P2N6 904 aa15.12■□□□□ 0.01
SMAD3-214ENST00000560402 WRAP73Q9P2S5 460 aaPredicted RBP15.12■□□□□ 0.01
SMAD3-214ENST00000560402 TPCN1Q9ULQ1 816 aa15.12■□□□□ 0.01
SMAD3-214ENST00000560402 INPP5FQ9Y2H2 1132 aa15.12■□□□□ 0.01
SMAD3-214ENST00000560402 PCDHB2Q9Y5E7 798 aa15.12■□□□□ 0.01
SMAD3-214ENST00000560402 WDFY4Q6ZS81 3184 aa15.12■□□□□ 0.01
SMAD3-214ENST00000560402 ZDBF2Q9HCK1 2354 aa15.12■□□□□ 0.01
SMAD3-214ENST00000560402 OFD1O75665 1012 aa15.11■□□□□ 0.01
SMAD3-214ENST00000560402 ERLIN2O94905 339 aa15.11■□□□□ 0.01
SMAD3-214ENST00000560402 CXCL14O95715 111 aa15.11■□□□□ 0.01
SMAD3-214ENST00000560402 GALTP07902 379 aa15.11■□□□□ 0.01
SMAD3-214ENST00000560402 AXLP30530 894 aa15.11■□□□□ 0.01
SMAD3-214ENST00000560402 PTPN5P54829 565 aa15.11■□□□□ 0.01
SMAD3-214ENST00000560402 LAMTOR4Q0VGL1 99 aa15.11■□□□□ 0.01
SMAD3-214ENST00000560402 MXD4Q14582 209 aaPredicted RBP15.11■□□□□ 0.01
SMAD3-214ENST00000560402 MRPL10Q7Z7H8 261 aaKnown RBP15.11■□□□□ 0.01
SMAD3-214ENST00000560402 TMEM173Q86WV6 379 aaPredicted RBP15.11■□□□□ 0.01
SMAD3-214ENST00000560402 PRPF31Q8WWY3 499 aaKnown RBP15.11■□□□□ 0.01
SMAD3-214ENST00000560402 UBN1Q9NPG3 1134 aa15.11■□□□□ 0.01
SMAD3-214ENST00000560402 LYPLA2O95372 231 aa15.1■□□□□ 0.01
SMAD3-214ENST00000560402 SLC11A1P49279 550 aa15.1■□□□□ 0.01
SMAD3-214ENST00000560402 XKR9Q5GH70 373 aa15.1■□□□□ 0.01
SMAD3-214ENST00000560402 AGMOQ6ZNB7 445 aa15.1■□□□□ 0.01
SMAD3-214ENST00000560402 ZBTB33Q86T24 672 aa15.1■□□□□ 0.01
SMAD3-214ENST00000560402 FERMT3Q86UX7 667 aa15.1■□□□□ 0.01
SMAD3-214ENST00000560402 IFNLR1Q8IU57 520 aaPredicted RBP15.1■□□□□ 0.01
SMAD3-214ENST00000560402 RNF149Q8NC42 400 aa15.1■□□□□ 0.01
SMAD3-214ENST00000560402 OXER1Q8TDS5 423 aa15.1■□□□□ 0.01
SMAD3-214ENST00000560402 TMEM143Q96AN5 459 aa15.1■□□□□ 0.01
SMAD3-214ENST00000560402 ASIC4Q96FT7 647 aa15.1■□□□□ 0.01
SMAD3-214ENST00000560402 DYDC2Q96IM9 177 aa15.1■□□□□ 0.01
SMAD3-214ENST00000560402 POMKQ9H5K3 350 aa15.1■□□□□ 0.01
SMAD3-214ENST00000560402 ZMYM2Q9UBW7 1377 aa15.1■□□□□ 0.01
SMAD3-214ENST00000560402 MEIS3P2A8K0S8 358 aa15.09■□□□□ 0.01
SMAD3-214ENST00000560402 INPPL1O15357 1258 aa15.09■□□□□ 0.01
SMAD3-214ENST00000560402 CTDNEP1O95476 244 aa15.09■□□□□ 0.01
SMAD3-214ENST00000560402 NCLP19338 710 aaKnown RBP15.09■□□□□ 0.01
SMAD3-214ENST00000560402 MRE11P49959 708 aa15.09■□□□□ 0.01
SMAD3-214ENST00000560402 POU5F1BQ06416 359 aa15.09■□□□□ 0.01
SMAD3-214ENST00000560402 NCBP1Q09161 790 aaKnown RBP15.09■□□□□ 0.01
SMAD3-214ENST00000560402 MTMR3Q13615 1198 aa15.09■□□□□ 0.01
SMAD3-214ENST00000560402 TFDP1Q14186 410 aa15.09■□□□□ 0.01
SMAD3-214ENST00000560402 PTPN14Q15678 1187 aa15.09■□□□□ 0.01
SMAD3-214ENST00000560402 SKOR2Q2VWA4 1001 aaPredicted RBP15.09■□□□□ 0.01
SMAD3-214ENST00000560402 NOTUMQ6P988 496 aa15.09■□□□□ 0.01
SMAD3-214ENST00000560402 ALYREFQ86V81 257 aaKnown RBP15.09■□□□□ 0.01
SMAD3-214ENST00000560402 UBALD2Q8IYN6 164 aa15.09■□□□□ 0.01
SMAD3-214ENST00000560402 ZNF579Q8NAF0 562 aaKnown RBP15.09■□□□□ 0.01
SMAD3-214ENST00000560402 TDRD5Q8NAT2 981 aaKnown RBP15.09■□□□□ 0.01
SMAD3-214ENST00000560402 BCL7CQ8WUZ0 217 aaPredicted RBP15.09■□□□□ 0.01
SMAD3-214ENST00000560402 TNFRSF25Q93038 417 aa15.09■□□□□ 0.01
SMAD3-214ENST00000560402 GTF3C6Q969F1 213 aa15.09■□□□□ 0.01
SMAD3-214ENST00000560402 FAM193BQ96PV7 902 aaPredicted RBP15.09■□□□□ 0.01
SMAD3-214ENST00000560402 APOL5Q9BWW9 433 aa15.09■□□□□ 0.01
SMAD3-214ENST00000560402 EMILIN2Q9BXX0 1053 aa15.09■□□□□ 0.01
SMAD3-214ENST00000560402 GBP3Q9H0R5 595 aa15.09■□□□□ 0.01
SMAD3-214ENST00000560402 MINDY3Q9H8M7 445 aa15.09■□□□□ 0.01
SMAD3-214ENST00000560402 SFXN1Q9H9B4 322 aa15.09■□□□□ 0.01
SMAD3-214ENST00000560402 ANKEF1Q9NU02 776 aa15.09■□□□□ 0.01
SMAD3-214ENST00000560402 RGL1Q9NZL6 768 aa15.09■□□□□ 0.01
SMAD3-214ENST00000560402 DNAJB4Q9UDY4 337 aa15.09■□□□□ 0.01
SMAD3-214ENST00000560402 SORCS3Q9UPU3 1222 aa15.09■□□□□ 0.01
SMAD3-214ENST00000560402 SMC3Q9UQE7 1217 aa15.09■□□□□ 0.01
SMAD3-214ENST00000560402 USTQ9Y2C2 406 aa15.09■□□□□ 0.01
SMAD3-214ENST00000560402 C2orf16Q68DN1 1984 aa15.09■□□□□ 0.01
SMAD3-214ENST00000560402 DGAT1O75907 488 aa15.08■□□□□ 0
SMAD3-214ENST00000560402 SRGAP2CP0DJJ0 459 aa15.08■□□□□ 0
SMAD3-214ENST00000560402 HOXA11P31270 313 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms