RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 PFASO15067 1338 aa14.35□□□□□ -0.11
TRAF3-208ENST00000560371 ZSCAN26Q16670 478 aa14.35□□□□□ -0.11
TRAF3-208ENST00000560371 EXT2Q93063 718 aa14.35□□□□□ -0.11
TRAF3-208ENST00000560371 C11orf70Q9BRQ4 267 aa14.35□□□□□ -0.11
TRAF3-208ENST00000560371 SUDS3Q9H7L9 328 aaPredicted RBP14.35□□□□□ -0.11
TRAF3-208ENST00000560371 ZNF500O60304 480 aaPredicted RBP14.34□□□□□ -0.11
TRAF3-208ENST00000560371 ACSL3O95573 720 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 ADORA2BP29275 332 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 XKR3Q5GH77 459 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 ATG9AQ7Z3C6 839 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 SPATS2Q86XZ4 545 aaKnown RBP14.34□□□□□ -0.11
TRAF3-208ENST00000560371 GPRC5AQ8NFJ5 357 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 PCSK1NQ9UHG2 260 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 GON4LQ3T8J9 2241 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 CELF2O95319 508 aaKnown RBP14.34□□□□□ -0.11
TRAF3-208ENST00000560371 BTBD8Q5XKL5 378 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 TMEM39BQ9GZU3 492 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 PYCARDQ9ULZ3 195 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 FAN1Q9Y2M0 1017 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 MIF4GDA9UHW6 222 aaKnown RBP14.34□□□□□ -0.11
TRAF3-208ENST00000560371 MAGEB2O15479 319 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 GH1P01241 217 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 SMARCA1P28370 1054 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 AP3M2P53677 418 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 SESN3P58005 492 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 DRAP1Q14919 205 aaPredicted RBP14.34□□□□□ -0.11
TRAF3-208ENST00000560371 GINM1Q9NU53 330 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 MGEA5O60502 916 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 DGAT1O75907 488 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 EFHC2Q5JST6 749 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 GNASQ5JWF2 1037 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 SRRM1Q8IYB3 904 aaKnown RBP14.34□□□□□ -0.11
TRAF3-208ENST00000560371 PGBD4Q96DM1 585 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 SPATA31A5Q5VU36 1347 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 SPATA31A7Q8IWB4 1347 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 PIK3C2BO00750 1634 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 WDR91A4D1P6 747 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 CTSHP09668 335 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 HP1BP3Q5SSJ5 553 aaPredicted RBP14.34□□□□□ -0.11
TRAF3-208ENST00000560371 TTC19Q6DKK2 380 aaPredicted RBP14.34□□□□□ -0.11
TRAF3-208ENST00000560371 TTC23LQ6PF05 361 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 ZMYND12Q9H0C1 365 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 EMSYQ7Z589 1322 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 SLC25A27O95847 323 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 ART3Q13508 389 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 TIPINQ9BVW5 301 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 VCPKMTQ9H867 229 aa14.34□□□□□ -0.11
TRAF3-208ENST00000560371 MFAP3LO75121 409 aa14.33□□□□□ -0.11
TRAF3-208ENST00000560371 GUF1Q8N442 669 aaKnown RBP14.33□□□□□ -0.11
TRAF3-208ENST00000560371 FBXL13Q8NEE6 735 aa14.33□□□□□ -0.11
TRAF3-208ENST00000560371 DDX50Q9BQ39 737 aaKnown RBP14.33□□□□□ -0.11
TRAF3-208ENST00000560371 NUDT12Q9BQG2 462 aa14.33□□□□□ -0.11
TRAF3-208ENST00000560371 PRR12Q9ULL5 1215 aa14.33□□□□□ -0.11
TRAF3-208ENST00000560371 DIS3Q9Y2L1 958 aaKnown RBP14.33□□□□□ -0.11
TRAF3-208ENST00000560371 MED14O60244 1454 aa14.33□□□□□ -0.12
TRAF3-208ENST00000560371 RASGRF2O14827 1237 aa14.33□□□□□ -0.12
TRAF3-208ENST00000560371 PALMO75781 387 aa14.33□□□□□ -0.12
TRAF3-208ENST00000560371 EYA4O95677 639 aa14.33□□□□□ -0.12
TRAF3-208ENST00000560371 PLS3P13797 630 aa14.33□□□□□ -0.12
TRAF3-208ENST00000560371 TAC1P20366 129 aa14.33□□□□□ -0.12
TRAF3-208ENST00000560371 YWHAHQ04917 246 aaPredicted RBP14.33□□□□□ -0.12
TRAF3-208ENST00000560371 SEPT1Q8WYJ6 367 aa14.33□□□□□ -0.12
TRAF3-208ENST00000560371 HEMGNQ9BXL5 484 aa14.33□□□□□ -0.12
TRAF3-208ENST00000560371 HACD3Q9P035 362 aa14.33□□□□□ -0.12
TRAF3-208ENST00000560371 SCAF8Q9UPN6 1271 aaKnown RBP14.33□□□□□ -0.12
TRAF3-208ENST00000560371 PP2D1A8MPX8 630 aa14.33□□□□□ -0.12
TRAF3-208ENST00000560371 CCDC188H7C350 402 aa14.33□□□□□ -0.12
TRAF3-208ENST00000560371 CTNND1O60716 968 aaKnown RBP14.33□□□□□ -0.12
TRAF3-208ENST00000560371 ATP2C1P98194 919 aaPredicted RBP14.33□□□□□ -0.12
TRAF3-208ENST00000560371 AP1B1Q10567 949 aa14.33□□□□□ -0.12
TRAF3-208ENST00000560371 SPATA2LQ8IUW3 424 aaPredicted RBP14.33□□□□□ -0.12
TRAF3-208ENST00000560371 SPATA17Q96L03 361 aa14.33□□□□□ -0.12
TRAF3-208ENST00000560371 DNAJC17Q9NVM6 304 aaKnown RBP14.33□□□□□ -0.12
TRAF3-208ENST00000560371 SFMBT1Q9UHJ3 866 aa14.33□□□□□ -0.12
TRAF3-208ENST00000560371 PPRC1Q5VV67 1664 aaKnown RBP14.33□□□□□ -0.12
TRAF3-208ENST00000560371 E5RI56 91 aa14.33□□□□□ -0.12
TRAF3-208ENST00000560371 STXBP3O00186 592 aa14.33□□□□□ -0.12
TRAF3-208ENST00000560371 GSTA4O15217 222 aa14.33□□□□□ -0.12
TRAF3-208ENST00000560371 ALDH1A1P00352 501 aa14.33□□□□□ -0.12
TRAF3-208ENST00000560371 PRKCBP05771 671 aa14.33□□□□□ -0.12
TRAF3-208ENST00000560371 TKFCQ3LXA3 575 aa14.33□□□□□ -0.12
TRAF3-208ENST00000560371 HEATR6Q6AI08 1181 aaKnown RBP14.33□□□□□ -0.12
TRAF3-208ENST00000560371 ANGPTL8Q6UXH0 198 aa14.33□□□□□ -0.12
TRAF3-208ENST00000560371 NUP85Q9BW27 656 aa14.33□□□□□ -0.12
TRAF3-208ENST00000560371 MOCS2O96007 188 aaPredicted RBP14.33□□□□□ -0.12
TRAF3-208ENST00000560371 FTLP02792 175 aaPredicted RBP14.33□□□□□ -0.12
TRAF3-208ENST00000560371 DPEP1P16444 411 aa14.33□□□□□ -0.12
TRAF3-208ENST00000560371 SZRD1Q7Z422 152 aa14.33□□□□□ -0.12
TRAF3-208ENST00000560371 KRT37O76014 449 aa14.33□□□□□ -0.12
TRAF3-208ENST00000560371 SAMD7Q7Z3H4 446 aa14.33□□□□□ -0.12
TRAF3-208ENST00000560371 EXOC4Q96A65 974 aa14.33□□□□□ -0.12
TRAF3-208ENST00000560371 SH2D3AQ9BRG2 576 aa14.33□□□□□ -0.12
TRAF3-208ENST00000560371 ABHD10Q9NUJ1 306 aa14.33□□□□□ -0.12
TRAF3-208ENST00000560371 SNX2O60749 519 aa14.32□□□□□ -0.12
TRAF3-208ENST00000560371 CCDC197Q8NCU1 140 aa14.32□□□□□ -0.12
TRAF3-208ENST00000560371 TMEM247A6NEH6 219 aa14.32□□□□□ -0.12
TRAF3-208ENST00000560371 OPHN1O60890 802 aa14.32□□□□□ -0.12
TRAF3-208ENST00000560371 ITPK1Q13572 414 aa14.32□□□□□ -0.12
TRAF3-208ENST00000560371 EFHD1Q9BUP0 239 aa14.32□□□□□ -0.12
TRAF3-208ENST00000560371 IP6K2Q9UHH9 426 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms