RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 TSGA10Q9BZW7 698 aa15.32■□□□□ 0.04
CARMIL3-203ENST00000560349 TAF1DQ9H5J8 278 aaPredicted RBP15.32■□□□□ 0.04
CARMIL3-203ENST00000560349 ANKZF1Q9H8Y5 726 aa15.32■□□□□ 0.04
CARMIL3-203ENST00000560349 SEPT11Q9NVA2 429 aaKnown RBP15.32■□□□□ 0.04
CARMIL3-203ENST00000560349 MCM3APO60318 1980 aa15.32■□□□□ 0.04
CARMIL3-203ENST00000560349 MYH9P35579 1960 aaKnown RBP15.32■□□□□ 0.04
CARMIL3-203ENST00000560349 NFASCO94856 1347 aa15.31■□□□□ 0.04
CARMIL3-203ENST00000560349 HSDL1Q3SXM5 330 aa15.31■□□□□ 0.04
CARMIL3-203ENST00000560349 GJC2Q5T442 439 aaPredicted RBP15.31■□□□□ 0.04
CARMIL3-203ENST00000560349 USP50Q70EL3 339 aaPredicted RBP15.31■□□□□ 0.04
CARMIL3-203ENST00000560349 GLYCTKQ8IVS8 523 aa15.31■□□□□ 0.04
CARMIL3-203ENST00000560349 CEP112Q8N8E3 955 aa15.31■□□□□ 0.04
CARMIL3-203ENST00000560349 FGD4Q96M96 766 aa15.31■□□□□ 0.04
CARMIL3-203ENST00000560349 IWS1Q96ST2 819 aa15.31■□□□□ 0.04
CARMIL3-203ENST00000560349 GPR88Q9GZN0 384 aa15.31■□□□□ 0.04
CARMIL3-203ENST00000560349 ATP6V0A4Q9HBG4 840 aa15.31■□□□□ 0.04
CARMIL3-203ENST00000560349 IGSF9BQ9UPX0 1349 aa15.31■□□□□ 0.04
CARMIL3-203ENST00000560349 GSTTP1A0A1W2PQM5 241 aa15.31■□□□□ 0.04
CARMIL3-203ENST00000560349 LRRIQ4A6NIV6 560 aa15.31■□□□□ 0.04
CARMIL3-203ENST00000560349 USP8P40818 1118 aa15.31■□□□□ 0.04
CARMIL3-203ENST00000560349 PALB2Q86YC2 1186 aa15.31■□□□□ 0.04
CARMIL3-203ENST00000560349 SLC9A9Q8IVB4 645 aa15.31■□□□□ 0.04
CARMIL3-203ENST00000560349 MAP4K3Q8IVH8 894 aa15.31■□□□□ 0.04
CARMIL3-203ENST00000560349 TRIM58Q8NG06 486 aa15.31■□□□□ 0.04
CARMIL3-203ENST00000560349 RDM1Q8NG50 284 aa15.31■□□□□ 0.04
CARMIL3-203ENST00000560349 ASAP3Q8TDY4 903 aa15.31■□□□□ 0.04
CARMIL3-203ENST00000560349 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.31■□□□□ 0.04
CARMIL3-203ENST00000560349 APEX2Q9UBZ4 518 aa15.31■□□□□ 0.04
CARMIL3-203ENST00000560349 PALMO75781 387 aa15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 ZMYND10O75800 440 aa15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 DGAT1O75907 488 aa15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 OATP04181 439 aa15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 MAPTP10636 758 aaKnown RBP15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 TCF7P36402 384 aaPredicted RBP15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 MATR3P43243 847 aaKnown RBP eCLIP15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 SEZ6Q53EL9 994 aa15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 ZNF662Q6ZS27 426 aa15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 INTS8Q75QN2 995 aaKnown RBP15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 U2AF1L4Q8WU68 220 aaKnown RBP15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 FUT8Q9BYC5 575 aa15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 UBE2TQ9NPD8 197 aaPredicted RBP15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 PDGFCQ9NRA1 345 aa15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 FBXO40Q9UH90 709 aa15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 HARSP12081 509 aaKnown RBP15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 RNASE9P60153 205 aaKnown RBP15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 C2orf54Q08AI8 447 aa15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 PPIL2Q13356 520 aa15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 PPP2R5AQ15172 486 aa15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 WHAMMP3Q1A5X7 153 aa15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 XKR3Q5GH77 459 aa15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 TAF3Q5VWG9 929 aa15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 PAPD7Q5XG87 772 aaKnown RBP15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 GPAT2Q6NUI2 795 aa15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 ALKBH5Q6P6C2 394 aaKnown RBP15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 LMO3Q8TAP4 145 aa15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 KIFAP3Q92845 792 aa15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 L3MBTL3Q96JM7 780 aaPredicted RBP15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 FAM213AQ9BRX8 229 aa15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 TMEM117Q9H0C3 514 aa15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 ARFGAP3Q9NP61 516 aa15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 NAGPAQ9UK23 515 aa15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 GTPBP10A4D1E9 387 aaKnown RBP15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 GLTPD2A6NH11 291 aa15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 FOXN3O00409 490 aaPredicted RBP15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 DDX3XO00571 662 aaKnown RBP eCLIP15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 CALCAP01258 141 aa15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 EDN1P05305 212 aa15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 LNX1Q8TBB1 728 aaPredicted RBP15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 MS4A14Q96JA4 679 aa15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 ZBTB45Q96K62 511 aaPredicted RBP15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 PLEKHA4Q9H4M7 779 aa15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 PDLIM7Q9NR12 457 aa15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 KCNH4Q9UQ05 1017 aa15.3■□□□□ 0.04
CARMIL3-203ENST00000560349 CXCL11O14625 94 aa15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 ABCB4P21439 1286 aa15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 SOX5P35711 763 aa15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 MXI1P50539 228 aa15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 WNT7BP56706 349 aa15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 SMC1AQ14683 1233 aaKnown RBP15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 SLC20A1Q8WUM9 679 aa15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 TRAPPC12Q8WVT3 735 aa15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 SEMA4DQ92854 862 aa15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 NOX5Q96PH1 765 aa15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 ALS2CR12Q96Q35 445 aa15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 MMP19Q99542 508 aa15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 PI4K2AQ9BTU6 479 aa15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 SUGCTQ9HAC7 445 aa15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 ANKFY1Q9P2R3 1169 aa15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 CHORDC1Q9UHD1 332 aaPredicted RBP15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 MAFBQ9Y5Q3 323 aaPredicted RBP15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 SOCS7O14512 581 aa15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 PJA2O43164 708 aa15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 STAM2O75886 525 aa15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 GJB1P08034 283 aa15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 EDNRBP24530 442 aa15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 OAS2P29728 719 aaKnown RBP15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 STAT1P42224 750 aa15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 NOP2P46087 812 aaKnown RBP15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 ACOT2P49753 483 aa15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 ALCAMQ13740 583 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms