RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 NT5C1B-RDH14C9J2C7 533 aa12.9□□□□□ -0.34
RABGGTA-216ENST00000560243 LINC01565O15544 149 aa12.9□□□□□ -0.34
RABGGTA-216ENST00000560243 EYA4O95677 639 aa12.9□□□□□ -0.34
RABGGTA-216ENST00000560243 EDN1P05305 212 aa12.9□□□□□ -0.34
RABGGTA-216ENST00000560243 SKIP12755 728 aa12.9□□□□□ -0.34
RABGGTA-216ENST00000560243 PDCP20941 246 aa12.9□□□□□ -0.34
RABGGTA-216ENST00000560243 RAB27AP51159 221 aa12.9□□□□□ -0.34
RABGGTA-216ENST00000560243 ERVFC1P60507 584 aa12.9□□□□□ -0.34
RABGGTA-216ENST00000560243 RESTQ13127 1097 aa12.9□□□□□ -0.34
RABGGTA-216ENST00000560243 COL19A1Q14993 1142 aa12.9□□□□□ -0.34
RABGGTA-216ENST00000560243 SF3A1Q15459 793 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-216ENST00000560243 NOMO2Q5JPE7 1267 aa12.9□□□□□ -0.34
RABGGTA-216ENST00000560243 ARL6IP4Q66PJ3 421 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-216ENST00000560243 CDCA2Q69YH5 1023 aaPredicted RBP12.9□□□□□ -0.34
RABGGTA-216ENST00000560243 GLB1LQ6UWU2 654 aa12.9□□□□□ -0.34
RABGGTA-216ENST00000560243 DAW1Q8N136 415 aa12.9□□□□□ -0.34
RABGGTA-216ENST00000560243 ADAMTS19Q8TE59 1207 aa12.9□□□□□ -0.34
RABGGTA-216ENST00000560243 INTS4Q96HW7 963 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-216ENST00000560243 ZNF558Q96NG5 402 aa12.9□□□□□ -0.34
RABGGTA-216ENST00000560243 TBC1D13Q9NVG8 400 aa12.9□□□□□ -0.34
RABGGTA-216ENST00000560243 DNM3Q9UQ16 869 aa12.9□□□□□ -0.34
RABGGTA-216ENST00000560243 MTMR6Q9Y217 621 aa12.9□□□□□ -0.34
RABGGTA-216ENST00000560243 IPPQ9Y573 584 aa12.9□□□□□ -0.34
RABGGTA-216ENST00000560243 CLIC4Q9Y696 253 aa12.9□□□□□ -0.34
RABGGTA-216ENST00000560243 H3BQ06 376 aaPredicted RBP12.89□□□□□ -0.35
RABGGTA-216ENST00000560243 LTBRP36941 435 aa12.89□□□□□ -0.35
RABGGTA-216ENST00000560243 BCAR1P56945 870 aa12.89□□□□□ -0.35
RABGGTA-216ENST00000560243 DLX2Q07687 328 aaPredicted RBP12.89□□□□□ -0.35
RABGGTA-216ENST00000560243 HYIQ5T013 277 aa12.89□□□□□ -0.35
RABGGTA-216ENST00000560243 NOTUMQ6P988 496 aa12.89□□□□□ -0.35
RABGGTA-216ENST00000560243 EP400NLQ6ZTU2 488 aa12.89□□□□□ -0.35
RABGGTA-216ENST00000560243 TMEM173Q86WV6 379 aaPredicted RBP12.89□□□□□ -0.35
RABGGTA-216ENST00000560243 ZNF280BQ86YH2 543 aa12.89□□□□□ -0.35
RABGGTA-216ENST00000560243 LRRC15Q8TF66 581 aa12.89□□□□□ -0.35
RABGGTA-216ENST00000560243 BCL7CQ8WUZ0 217 aaPredicted RBP12.89□□□□□ -0.35
RABGGTA-216ENST00000560243 SNX21Q969T3 373 aa12.89□□□□□ -0.35
RABGGTA-216ENST00000560243 PGBD4Q96DM1 585 aa12.89□□□□□ -0.35
RABGGTA-216ENST00000560243 CCDC113Q9H0I3 377 aa12.89□□□□□ -0.35
RABGGTA-216ENST00000560243 GBP3Q9H0R5 595 aa12.89□□□□□ -0.35
RABGGTA-216ENST00000560243 CSRNP2Q9H175 543 aa12.89□□□□□ -0.35
RABGGTA-216ENST00000560243 FZD8Q9H461 694 aa12.89□□□□□ -0.35
RABGGTA-216ENST00000560243 NXF3Q9H4D5 531 aaKnown RBP12.89□□□□□ -0.35
RABGGTA-216ENST00000560243 IGFLR1Q9H665 355 aa12.89□□□□□ -0.35
RABGGTA-216ENST00000560243 NRDE2Q9H7Z3 1164 aa12.89□□□□□ -0.35
RABGGTA-216ENST00000560243 DNAJB4Q9UDY4 337 aa12.89□□□□□ -0.35
RABGGTA-216ENST00000560243 STK24Q9Y6E0 443 aa12.89□□□□□ -0.35
RABGGTA-216ENST00000560243 ZC3H11AO75152 810 aaKnown RBP eCLIP12.88□□□□□ -0.35
RABGGTA-216ENST00000560243 DDHD2O94830 711 aa12.88□□□□□ -0.35
RABGGTA-216ENST00000560243 NPTXRO95502 500 aa12.88□□□□□ -0.35
RABGGTA-216ENST00000560243 LIG1P18858 919 aa12.88□□□□□ -0.35
RABGGTA-216ENST00000560243 NCLP19338 710 aaKnown RBP12.88□□□□□ -0.35
RABGGTA-216ENST00000560243 AXLP30530 894 aa12.88□□□□□ -0.35
RABGGTA-216ENST00000560243 NAMPTP43490 491 aa12.88□□□□□ -0.35
RABGGTA-216ENST00000560243 RBM10P98175 930 aaKnown RBP12.88□□□□□ -0.35
RABGGTA-216ENST00000560243 PLCB3Q01970 1234 aa12.88□□□□□ -0.35
RABGGTA-216ENST00000560243 MAPK7Q13164 816 aa12.88□□□□□ -0.35
RABGGTA-216ENST00000560243 PTPAQ15257 358 aa12.88□□□□□ -0.35
RABGGTA-216ENST00000560243 PCBP1Q15365 356 aaKnown RBP eCLIP12.88□□□□□ -0.351e-6■■■□□ 16.1
RABGGTA-216ENST00000560243 CSPP1Q1MSJ5 1256 aa12.88□□□□□ -0.35
RABGGTA-216ENST00000560243 AAK1Q2M2I8 961 aa12.88□□□□□ -0.35
RABGGTA-216ENST00000560243 CTC1Q2NKJ3 1217 aa12.88□□□□□ -0.35
RABGGTA-216ENST00000560243 RINT1Q6NUQ1 792 aa12.88□□□□□ -0.35
RABGGTA-216ENST00000560243 C1orf186Q6ZWK4 172 aa12.88□□□□□ -0.35
RABGGTA-216ENST00000560243 RBM23Q86U06 439 aaKnown RBP12.88□□□□□ -0.35
RABGGTA-216ENST00000560243 SLC39A11Q8N1S5 342 aa12.88□□□□□ -0.35
RABGGTA-216ENST00000560243 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.88□□□□□ -0.35
RABGGTA-216ENST00000560243 DEPTORQ8TB45 409 aa12.88□□□□□ -0.35
RABGGTA-216ENST00000560243 MRPS27Q92552 414 aaKnown RBP12.88□□□□□ -0.35
RABGGTA-216ENST00000560243 PABPC5Q96DU9 382 aaKnown RBP12.88□□□□□ -0.35
RABGGTA-216ENST00000560243 CCDC51Q96ER9 411 aa12.88□□□□□ -0.35
RABGGTA-216ENST00000560243 APOL6Q9BWW8 343 aa12.88□□□□□ -0.35
RABGGTA-216ENST00000560243 MRPL9Q9BYD2 267 aaKnown RBP12.88□□□□□ -0.35
RABGGTA-216ENST00000560243 RSAD1Q9HA92 442 aa12.88□□□□□ -0.35
RABGGTA-216ENST00000560243 TLR9Q9NR96 1032 aa12.88□□□□□ -0.35
RABGGTA-216ENST00000560243 CLDND1Q9NY35 253 aa12.88□□□□□ -0.35
RABGGTA-216ENST00000560243 SPG21Q9NZD8 308 aa12.88□□□□□ -0.35
RABGGTA-216ENST00000560243 A0A1B0GUA9 196 aa12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 SFI1A8K8P3 1242 aa12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 FSCN2O14926 492 aa12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 PER2O15055 1255 aa12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 HIP1RO75146 1068 aa12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 TBX10O75333 385 aa12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 POMCP01189 267 aa12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 SSBP05455 408 aaKnown RBP eCLIP12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 PRKCBP05771 671 aa12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 ITGA4P13612 1032 aa12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 NRIP1P48552 1158 aa12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 SLC11A1P49279 550 aa12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 PEX3P56589 373 aa12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 CEBPZQ03701 1054 aaKnown RBP12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 UBE3AQ05086 875 aa12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 RNASELQ05823 741 aaKnown RBP12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 NCBP1Q09161 790 aaKnown RBP12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 RAD51AP2Q09MP3 1159 aa12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 LEXMQ3ZCV2 418 aa12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 TMEM119Q4V9L6 283 aa12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 EEF1DP3Q658K8 133 aa12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 PPP4R3CPQ6ZMV5 832 aa12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 USP49Q70CQ1 688 aa12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 CABP7Q86V35 215 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms