RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 TMA16Q96EY4 203 aaKnown RBP14.65□□□□□ -0.06
CSPG4P12-202ENST00000559989 PCIF1Q9H4Z3 704 aa14.65□□□□□ -0.06
CSPG4P12-202ENST00000559989 TFDP2Q14188 446 aa14.65□□□□□ -0.06
CSPG4P12-202ENST00000559989 QKIQ96PU8 341 aaKnown RBP eCLIP14.65□□□□□ -0.06
CSPG4P12-202ENST00000559989 HEY1Q9Y5J3 304 aa14.65□□□□□ -0.06
CSPG4P12-202ENST00000559989 FKBP9O95302 570 aa14.65□□□□□ -0.06
CSPG4P12-202ENST00000559989 RASGRF1Q13972 1273 aa14.65□□□□□ -0.06
CSPG4P12-202ENST00000559989 FKBP9P1Q75LS8 142 aa14.65□□□□□ -0.06
CSPG4P12-202ENST00000559989 MDM1Q8TC05 714 aa14.65□□□□□ -0.06
CSPG4P12-202ENST00000559989 UNC45AQ9H3U1 944 aa14.65□□□□□ -0.06
CSPG4P12-202ENST00000559989 PEX1O43933 1283 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 ROR1Q01973 937 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 IMPAD1Q9NX62 359 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 NRBP1Q9UHY1 535 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 TSR3Q9UJK0 312 aaKnown RBP14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 CLIC2O15247 247 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 TLR2O60603 784 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 CYP4A11Q02928 519 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 LLGL1Q15334 1064 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 SNF8Q96H20 258 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 FOXP1Q9H334 677 aaPredicted RBP14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 PLOD1Q02809 727 aaPredicted RBP14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 EIF2B5Q13144 721 aaKnown RBP14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 MMRN1Q13201 1228 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 ZNF827Q17R98 1081 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 NUDT18Q6ZVK8 323 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 SH3TC1Q8TE82 1336 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 CSPG5O95196 566 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 AP1S2P56377 157 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 ASPRV1Q53RT3 343 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 SCARA5Q6ZMJ2 495 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 MICU2Q8IYU8 434 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 PNMA1Q8ND90 353 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 ZBED2Q9BTP6 218 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 CACNA2D2Q9NY47 1150 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 DDX56Q9NY93 547 aaKnown RBP14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 PCDHA1Q9Y5I3 950 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 RSPH10B2B2RC85 870 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 STX7O15400 261 aaKnown RBP14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 RSPH10BP0C881 870 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 PPP3CCP48454 512 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 ARL4DP49703 201 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 SLC16A1P53985 500 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 HEATR6Q6AI08 1181 aaKnown RBP14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 TOGARAM2Q6ZUX3 1019 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 LRRC47Q8N1G4 583 aaKnown RBP14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 SPATA16Q9BXB7 569 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 STK32BQ9NY57 414 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 ZFYVE9O95405 1425 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 PRG4Q92954 1404 aaPredicted RBP14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 LDHAP00338 332 aaKnown RBP14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 TALDO1P37837 337 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 GGCXP38435 758 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 ZBED6P86452 979 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 SGSM1Q2NKQ1 1148 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 DENND6AQ8IWF6 608 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 PPM1NQ8N819 430 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 CALML6Q8TD86 181 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 C8orf37Q96NL8 207 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 DDX50Q9BQ39 737 aaKnown RBP14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 TUFT1Q9NNX1 390 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 ANAPC7Q9UJX3 599 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 PCDHA4Q9UN74 947 aa14.64□□□□□ -0.07
CSPG4P12-202ENST00000559989 CENPXA8MT69 81 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 MIF4GDA9UHW6 222 aaKnown RBP14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 SERPIND1P05546 499 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 COG2Q14746 738 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 TBC1D10BQ4KMP7 808 aaPredicted RBP14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 SYTL3Q4VX76 610 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 KLHL12Q53G59 568 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 NFRKBQ6P4R8 1299 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 OR8H2Q8N162 312 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 FAM89AQ96GI7 184 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 CCDC87Q9NVE4 849 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 RHBDL2Q9NX52 303 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 CLIC4Q9Y696 253 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 SRP72O76094 671 aaKnown RBP14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 MXI1P50539 228 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 DMPKQ09013 629 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 ATP11CQ8NB49 1132 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 DCPSQ96C86 337 aaKnown RBP14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 NGRNQ9NPE2 291 aaKnown RBP14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 IL1RAPL1Q9NZN1 696 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 DPYSL4O14531 572 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 USP1O94782 785 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 GGPS1O95749 300 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 ALBP02768 609 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 PNMA6AP0CW24 399 aaPredicted RBP14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 GCFC2P16383 781 aaKnown RBP14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 SLC25A24Q6NUK1 477 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 L3MBTL3Q96JM7 780 aaPredicted RBP14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 USP28Q96RU2 1077 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 LOC102724159A0A0B4J2E5 919 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 PUDPQ08623 228 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 PWP2Q15269 919 aaKnown RBP14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 STX12Q86Y82 276 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 CLIC6Q96NY7 704 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 KCNK16Q96T55 309 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 IQCA1LA6NCM1 817 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 RABGAP1LQ5R372 815 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms