RNA–Protein interactions for RNA: ENST00000559257.5

USP3-211, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 2,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-211ENST00000559257 UBXN2AP68543 259 aa9.04□□□□□ -0.96
USP3-211ENST00000559257 CHRNEQ04844 493 aa9.04□□□□□ -0.96
USP3-211ENST00000559257 SLC34A1Q06495 639 aa9.04□□□□□ -0.96
USP3-211ENST00000559257 PDE4DQ08499 809 aa9.04□□□□□ -0.96
USP3-211ENST00000559257 KCTD2Q14681 263 aa9.04□□□□□ -0.96
USP3-211ENST00000559257 WDR72Q3MJ13 1102 aa9.04□□□□□ -0.96
USP3-211ENST00000559257 HERC4Q5GLZ8 1057 aaPredicted RBP9.04□□□□□ -0.96
USP3-211ENST00000559257 KIAA1841Q6NSI8 718 aa9.04□□□□□ -0.96
USP3-211ENST00000559257 NEK5Q6P3R8 708 aa9.04□□□□□ -0.96
USP3-211ENST00000559257 DBX2Q6ZNG2 339 aa9.04□□□□□ -0.96
USP3-211ENST00000559257 MCM10Q7L590 875 aa9.04□□□□□ -0.96
USP3-211ENST00000559257 GALNT7Q86SF2 657 aa9.04□□□□□ -0.96
USP3-211ENST00000559257 ENAHQ8N8S7 591 aaPredicted RBP9.04□□□□□ -0.96
USP3-211ENST00000559257 SUPT20HQ8NEM7 779 aa9.04□□□□□ -0.96
USP3-211ENST00000559257 OSBP2Q969R2 916 aa9.04□□□□□ -0.96
USP3-211ENST00000559257 CAPZA3Q96KX2 299 aa9.04□□□□□ -0.96
USP3-211ENST00000559257 FAM20AQ96MK3 541 aa9.04□□□□□ -0.96
USP3-211ENST00000559257 AIFM3Q96NN9 605 aa9.04□□□□□ -0.96
USP3-211ENST00000559257 MTMR9Q96QG7 549 aa9.04□□□□□ -0.96
USP3-211ENST00000559257 ELAC2Q9BQ52 826 aaKnown RBP9.04□□□□□ -0.96
USP3-211ENST00000559257 MRPL9Q9BYD2 267 aaKnown RBP9.04□□□□□ -0.96
USP3-211ENST00000559257 IMPG2Q9BZV3 1241 aa9.04□□□□□ -0.96
USP3-211ENST00000559257 QTRT2Q9H974 415 aaKnown RBP9.04□□□□□ -0.96
USP3-211ENST00000559257 MACROD2A1Z1Q3 448 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 GUCY1B2O75343 617 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 PAHP00439 452 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 AFPP02771 609 aaKnown RBP9.03□□□□□ -0.96
USP3-211ENST00000559257 ZCCHC18P0CG32 403 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 POLR2CP19387 275 aaPredicted RBP9.03□□□□□ -0.96
USP3-211ENST00000559257 STAT3P40763 770 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 SLC1A1P43005 524 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 VPS41P49754 854 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 BLVRAP53004 296 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 KRT76Q01546 638 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 TRAP1Q12931 704 aaKnown RBP9.03□□□□□ -0.96
USP3-211ENST00000559257 NFE2L1Q14494 772 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 MAPRE2Q15555 327 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 KLHL38Q2WGJ6 581 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 CEP85Q6P2H3 762 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 ACAD11Q709F0 780 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 KRT28Q7Z3Y7 464 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 NET1Q7Z628 596 aaPredicted RBP9.03□□□□□ -0.96
USP3-211ENST00000559257 SLAIN1Q8ND83 568 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 SPATA4Q8NEY3 305 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 TLCD1Q96CP7 247 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 BIRC8Q96P09 236 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 VPS16Q9H269 839 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 FANCEQ9HB96 536 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 RIMKLBQ9ULI2 386 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 VANGL2Q9ULK5 521 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 DMTF1Q9Y222 760 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 KIDINS220Q9ULH0 1771 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 ADGRB1O14514 1584 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 UGGT1Q9NYU2 1555 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 ANKRD26Q9UPS8 1709 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 OR5K4A6NMS3 321 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 BACH1O14867 736 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 AP1G1O43747 822 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 OLFM2O95897 454 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 PRKACAP17612 351 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 HSPA1LP34931 641 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 PBX1P40424 430 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 ZNF844Q08AG5 666 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 MRPL28Q13084 256 aaKnown RBP9.03□□□□□ -0.96
USP3-211ENST00000559257 ACAP1Q15027 740 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 STK11Q15831 433 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 SPATA1Q5VX52 437 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 C8orf74Q6P047 294 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 KIF6Q6ZMV9 814 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 HS2ST1Q7LGA3 356 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 CREG2Q8IUH2 290 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 LRRC34Q8IZ02 419 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 AADATQ8N5Z0 425 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 ANKRD53Q8N9V6 530 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 SLC17A8Q8NDX2 589 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 APPL2Q8NEU8 664 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 ATXN2LQ8WWM7 1075 aaKnown RBP9.03□□□□□ -0.96
USP3-211ENST00000559257 HERVK_113Q902F9 699 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 CAAP1Q9H8G2 361 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 ETNK1Q9HBU6 452 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 TCP11L1Q9NUJ3 509 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 CLIC5Q9NZA1 410 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 GMIPQ9P107 970 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 ARL2BPQ9Y2Y0 163 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 IVNS1ABPQ9Y6Y0 642 aa9.03□□□□□ -0.96
USP3-211ENST00000559257 ATP7BP35670 1465 aa9.02□□□□□ -0.96
USP3-211ENST00000559257 B8ZZF3 427 aa9.02□□□□□ -0.97
USP3-211ENST00000559257 ZNF862O60290 1169 aa9.02□□□□□ -0.97
USP3-211ENST00000559257 SRGAP2O75044 1071 aa9.02□□□□□ -0.97
USP3-211ENST00000559257 EPS15P42566 896 aa9.02□□□□□ -0.97
USP3-211ENST00000559257 HAAOP46952 286 aa9.02□□□□□ -0.97
USP3-211ENST00000559257 ME1P48163 572 aa9.02□□□□□ -0.97
USP3-211ENST00000559257 RBL2Q08999 1139 aa9.02□□□□□ -0.97
USP3-211ENST00000559257 FLIIQ13045 1269 aa9.02□□□□□ -0.97
USP3-211ENST00000559257 GIT2Q14161 759 aa9.02□□□□□ -0.97
USP3-211ENST00000559257 LMBRD2Q68DH5 695 aaPredicted RBP9.02□□□□□ -0.97
USP3-211ENST00000559257 RNF43Q68DV7 783 aa9.02□□□□□ -0.97
USP3-211ENST00000559257 ZNF600Q6ZNG1 722 aa9.02□□□□□ -0.97
USP3-211ENST00000559257 NUTM2AQ8IVF1 878 aaPredicted RBP9.02□□□□□ -0.97
USP3-211ENST00000559257 PDZD8Q8NEN9 1154 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms