RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 LTBP3Q9NS15 1303 aa6.3□□□□□ -1.4
CTDSPL2-206ENST00000559175 SCN7AQ01118 1682 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 USP6P35125 1406 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 CCDC69A6NI79 296 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 GBE1Q04446 702 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 SCARB2Q14108 478 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 ZNF362Q5T0B9 420 aaPredicted RBP6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 MCTP1Q6DN14 999 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 CHST15Q7LFX5 561 aaPredicted RBP6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 SPATA21Q7Z572 469 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 ZNF527Q8NB42 609 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 AHCYL2Q96HN2 611 aaKnown RBP6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 PRDM5Q9NQX1 630 aaPredicted RBP6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 C1orf112Q9NSG2 853 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 HDAC6Q9UBN7 1215 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 HPCAL4Q9UM19 191 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 RAD50Q92878 1312 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 ARHGAP10A1A4S6 786 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 MYO1CO00159 1063 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 CASQ2O14958 399 aaPredicted RBP6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 KDM1AO60341 852 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 ATP6V1G1O75348 118 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 F12P00748 615 aaPredicted RBP6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 MYCP01106 439 aaPredicted RBP6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 ARAFP10398 606 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 ADCYAP1R1P41586 468 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 POLD2P49005 469 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 SULT1E1P49888 294 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 INAQ16352 499 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 HGSNATQ68CP4 663 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 LRRC49Q8IUZ0 686 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 SLITRK4Q8IW52 837 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 CMTR2Q8IYT2 770 aaKnown RBP6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 SLC30A5Q8TAD4 765 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 PTCD2Q8WV60 388 aaKnown RBP6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 NANOS1Q8WY41 292 aaKnown RBP6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 KISS1RQ969F8 398 aaPredicted RBP6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 MIEF2Q96C03 454 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 COG8Q96MW5 612 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 DUSP12Q9UNI6 340 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 A0A1W2PQH9 124 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 TRIM38O00635 465 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 GNRH1P01148 92 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 VEGFAP15692 232 aaPredicted RBP6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 DPP6P42658 865 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 LIG3P49916 1009 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 CPT1AP50416 773 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 ICA1Q05084 483 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 ARHGAP11AQ6P4F7 1023 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 VHLLQ6RSH7 139 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 C3orf58Q8NDZ4 430 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 RABGGTAQ92696 567 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 RBM17Q96I25 401 aaKnown RBP6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 FAXDC2Q96IV6 333 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 ZCWPW1Q9H0M4 648 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 INVSQ9Y283 1065 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 ZBED9Q6R2W3 1325 aa6.29□□□□□ -1.4
CTDSPL2-206ENST00000559175 RFPL3O75679 317 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 FSBPO95073 299 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 PAPLNO95428 1278 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 ZBTB48P10074 688 aaPredicted RBP6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 GRIA2P42262 883 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 MAGEA10P43363 369 aaPredicted RBP6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 GALNT1Q10472 559 aaPredicted RBP6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 IDI1Q13907 227 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 PDIA5Q14554 519 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 CNGA3Q16281 694 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 SMUG1Q53HV7 270 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 MTHFD1LQ6UB35 978 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 ZNF804AQ7Z570 1209 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 TCP11L2Q8N4U5 519 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 RBM14Q96PK6 669 aaKnown RBP6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 SLC2A13Q96QE2 648 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 SYNCQ9H7C4 482 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 SLC52A2Q9HAB3 445 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 ARHGAP26Q9UNA1 814 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 AP1M2Q9Y6Q5 423 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 KDRP35968 1356 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 ARAP2Q8WZ64 1704 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 LRRC37AA6NMS7 1700 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 G3V3G9 751 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 INO80B-WBP1J3KQ70 363 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 PLOD2O00469 737 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 LTKP29376 864 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 NF2P35240 595 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 GCKP35557 465 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 SH2D4BQ5SQS7 431 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 PIK3R6Q5UE93 754 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 JMJD6Q6NYC1 403 aaPredicted RBP6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 RGS9BPQ6ZS82 235 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 UBR3Q6ZT12 1888 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 TMC6Q7Z403 805 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 ILDR1Q86SU0 546 aaPredicted RBP6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 OR8H3Q8N146 312 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 TBC1D5Q92609 795 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 ROBO2Q9HCK4 1378 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 ARHGEF4Q9NR80 690 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 USP3Q9Y6I4 520 aa6.28□□□□□ -1.4
CTDSPL2-206ENST00000559175 AP3D1O14617 1153 aa6.27□□□□□ -1.4
CTDSPL2-206ENST00000559175 MAFKO60675 156 aa6.27□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms