RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 LPPQ93052 612 aa17.93■□□□□ 0.46
CDC42BPB-203ENST00000558867 KCNK12Q9HB15 430 aa17.93■□□□□ 0.46
CDC42BPB-203ENST00000558867 OFD1O75665 1012 aa17.92■□□□□ 0.46
CDC42BPB-203ENST00000558867 CLCN4P51793 760 aa17.92■□□□□ 0.46
CDC42BPB-203ENST00000558867 NUCB2P80303 420 aa17.92■□□□□ 0.46
CDC42BPB-203ENST00000558867 LONRF3Q496Y0 759 aa17.92■□□□□ 0.46
CDC42BPB-203ENST00000558867 CWF19L1Q69YN2 538 aaKnown RBP17.92■□□□□ 0.46
CDC42BPB-203ENST00000558867 CLEC17AQ6ZS10 378 aa17.92■□□□□ 0.46
CDC42BPB-203ENST00000558867 TMEM173Q86WV6 379 aaPredicted RBP17.92■□□□□ 0.46
CDC42BPB-203ENST00000558867 NXPE3Q969Y0 559 aa17.92■□□□□ 0.46
CDC42BPB-203ENST00000558867 LENG9Q96B70 501 aa17.92■□□□□ 0.46
CDC42BPB-203ENST00000558867 KLHL5Q96PQ7 755 aa17.92■□□□□ 0.46
CDC42BPB-203ENST00000558867 TMEM175Q9BSA9 504 aa17.92■□□□□ 0.46
CDC42BPB-203ENST00000558867 AGXT2Q9BYV1 514 aa17.92■□□□□ 0.46
CDC42BPB-203ENST00000558867 WNT16Q9UBV4 365 aa17.92■□□□□ 0.46
CDC42BPB-203ENST00000558867 FAN1Q9Y2M0 1017 aa17.92■□□□□ 0.46
CDC42BPB-203ENST00000558867 CNTNAP2Q9UHC6 1331 aa17.92■□□□□ 0.46
CDC42BPB-203ENST00000558867 DDX11L8A8MPP1 907 aa17.91■□□□□ 0.46
CDC42BPB-203ENST00000558867 DKC1O60832 514 aaKnown RBP eCLIP17.91■□□□□ 0.46
CDC42BPB-203ENST00000558867 URODP06132 367 aa17.91■□□□□ 0.46
CDC42BPB-203ENST00000558867 ADH1AP07327 375 aa17.91■□□□□ 0.46
CDC42BPB-203ENST00000558867 SLC11A1P49279 550 aa17.91■□□□□ 0.46
CDC42BPB-203ENST00000558867 NFKBIBQ15653 356 aa17.91■□□□□ 0.46
CDC42BPB-203ENST00000558867 UGCGQ16739 394 aa17.91■□□□□ 0.46
CDC42BPB-203ENST00000558867 SPRYD3Q8NCJ5 442 aa17.91■□□□□ 0.46
CDC42BPB-203ENST00000558867 CMASQ8NFW8 434 aaPredicted RBP17.91■□□□□ 0.46
CDC42BPB-203ENST00000558867 NLRP4Q96MN2 994 aa17.91■□□□□ 0.46
CDC42BPB-203ENST00000558867 UNC45AQ9H3U1 944 aa17.91■□□□□ 0.46
CDC42BPB-203ENST00000558867 UBN1Q9NPG3 1134 aa17.91■□□□□ 0.46
CDC42BPB-203ENST00000558867 PCDHB2Q9Y5E7 798 aa17.91■□□□□ 0.46
CDC42BPB-203ENST00000558867 WDR87Q6ZQQ6 2873 aa17.9■□□□□ 0.46
CDC42BPB-203ENST00000558867 VPS13AQ96RL7 3174 aa17.9■□□□□ 0.46
CDC42BPB-203ENST00000558867 IGKV6-21A0A0C4DH24 114 aa17.9■□□□□ 0.46
CDC42BPB-203ENST00000558867 MAFO75444 373 aaPredicted RBP17.9■□□□□ 0.46
CDC42BPB-203ENST00000558867 NR1I2O75469 434 aa17.9■□□□□ 0.46
CDC42BPB-203ENST00000558867 SSBP05455 408 aaKnown RBP eCLIP17.9■□□□□ 0.46
CDC42BPB-203ENST00000558867 CNPP09543 421 aaKnown RBP17.9■□□□□ 0.46
CDC42BPB-203ENST00000558867 GBP2P32456 591 aaPredicted RBP17.9■□□□□ 0.46
CDC42BPB-203ENST00000558867 CNNM3Q8NE01 707 aa17.9■□□□□ 0.46
CDC42BPB-203ENST00000558867 RNF26Q9BY78 433 aaPredicted RBP17.9■□□□□ 0.46
CDC42BPB-203ENST00000558867 RSAD1Q9HA92 442 aa17.9■□□□□ 0.46
CDC42BPB-203ENST00000558867 SH3GLB2Q9NR46 395 aa17.9■□□□□ 0.46
CDC42BPB-203ENST00000558867 DNAJB4Q9UDY4 337 aa17.9■□□□□ 0.46
CDC42BPB-203ENST00000558867 WDR81Q562E7 1941 aa17.9■□□□□ 0.46
CDC42BPB-203ENST00000558867 GVINP1Q7Z2Y8 2422 aa17.89■□□□□ 0.45
CDC42BPB-203ENST00000558867 PI15O43692 258 aa17.89■□□□□ 0.45
CDC42BPB-203ENST00000558867 LMNAP02545 664 aaKnown RBP17.89■□□□□ 0.45
CDC42BPB-203ENST00000558867 PDIA4P13667 645 aaKnown RBP17.89■□□□□ 0.45
CDC42BPB-203ENST00000558867 NPR3P17342 541 aa17.89■□□□□ 0.45
CDC42BPB-203ENST00000558867 NLRP5P59047 1200 aa17.89■□□□□ 0.45
CDC42BPB-203ENST00000558867 DRP2Q13474 957 aa17.89■□□□□ 0.45
CDC42BPB-203ENST00000558867 TOB2Q14106 344 aaPredicted RBP17.89■□□□□ 0.45
CDC42BPB-203ENST00000558867 Q4G0T1 1027 aa17.89■□□□□ 0.45
CDC42BPB-203ENST00000558867 ZC3H14Q6PJT7 736 aaKnown RBP17.89■□□□□ 0.45
CDC42BPB-203ENST00000558867 SLC7A3Q8WY07 619 aa17.89■□□□□ 0.45
CDC42BPB-203ENST00000558867 RHOBTB2Q9BYZ6 727 aa17.89■□□□□ 0.45
CDC42BPB-203ENST00000558867 AGPAT5Q9NUQ2 364 aa17.89■□□□□ 0.45
CDC42BPB-203ENST00000558867 PPME1Q9Y570 386 aa17.89■□□□□ 0.45
CDC42BPB-203ENST00000558867 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.89■□□□□ 0.45
CDC42BPB-203ENST00000558867 CCDC195A0A1B0GUA6 201 aa17.88■□□□□ 0.45
CDC42BPB-203ENST00000558867 PSMD10O75832 226 aa17.88■□□□□ 0.45
CDC42BPB-203ENST00000558867 SOD2P04179 222 aa17.88■□□□□ 0.45
CDC42BPB-203ENST00000558867 CPA1P15085 419 aa17.88■□□□□ 0.45
CDC42BPB-203ENST00000558867 PSMC5P62195 406 aa17.88■□□□□ 0.45
CDC42BPB-203ENST00000558867 NCBP1Q09161 790 aaKnown RBP17.88■□□□□ 0.45
CDC42BPB-203ENST00000558867 Q6ZUG5 572 aa17.88■□□□□ 0.45
CDC42BPB-203ENST00000558867 SRGAP1Q7Z6B7 1085 aa17.88■□□□□ 0.45
CDC42BPB-203ENST00000558867 ZNF280BQ86YH2 543 aa17.88■□□□□ 0.45
CDC42BPB-203ENST00000558867 HDAC7Q8WUI4 952 aa17.88■□□□□ 0.45
CDC42BPB-203ENST00000558867 BCL7CQ8WUZ0 217 aaPredicted RBP17.88■□□□□ 0.45
CDC42BPB-203ENST00000558867 BRF1Q92994 677 aa17.88■□□□□ 0.45
CDC42BPB-203ENST00000558867 PHKBQ93100 1093 aa17.88■□□□□ 0.45
CDC42BPB-203ENST00000558867 RPS6KC1Q96S38 1066 aa17.88■□□□□ 0.45
CDC42BPB-203ENST00000558867 SLC26A6Q9BXS9 759 aa17.88■□□□□ 0.45
CDC42BPB-203ENST00000558867 WDR6Q9NNW5 1121 aaKnown RBP17.88■□□□□ 0.45
CDC42BPB-203ENST00000558867 MAN1C1Q9NR34 630 aa17.88■□□□□ 0.45
CDC42BPB-203ENST00000558867 DMDP11532 3685 aa17.88■□□□□ 0.45
CDC42BPB-203ENST00000558867 DENND4AQ7Z401 1863 aa17.88■□□□□ 0.45
CDC42BPB-203ENST00000558867 C2CD2LO14523 706 aa17.87■□□□□ 0.45
CDC42BPB-203ENST00000558867 GLUD1P00367 558 aa17.87■□□□□ 0.45
CDC42BPB-203ENST00000558867 CFHP08603 1231 aa17.87■□□□□ 0.45
CDC42BPB-203ENST00000558867 MRPL10Q7Z7H8 261 aaKnown RBP17.87■□□□□ 0.45
CDC42BPB-203ENST00000558867 TRIM22Q8IYM9 498 aa17.87■□□□□ 0.45
CDC42BPB-203ENST00000558867 TBCKQ8TEA7 893 aa17.87■□□□□ 0.45
CDC42BPB-203ENST00000558867 PIDD1Q9HB75 910 aa17.87■□□□□ 0.45
CDC42BPB-203ENST00000558867 COL4A3BPQ9Y5P4 624 aa17.87■□□□□ 0.45
CDC42BPB-203ENST00000558867 ZNF292O60281 2723 aa17.87■□□□□ 0.45
CDC42BPB-203ENST00000558867 MEIS3P2A8K0S8 358 aa17.86■□□□□ 0.45
CDC42BPB-203ENST00000558867 NRP1O14786 923 aa17.86■□□□□ 0.45
CDC42BPB-203ENST00000558867 ADAMTS3O15072 1205 aa17.86■□□□□ 0.45
CDC42BPB-203ENST00000558867 LILRB3O75022 631 aa17.86■□□□□ 0.45
CDC42BPB-203ENST00000558867 C1RP00736 705 aa17.86■□□□□ 0.45
CDC42BPB-203ENST00000558867 SRFP11831 508 aa17.86■□□□□ 0.45
CDC42BPB-203ENST00000558867 EVCP57679 992 aa17.86■□□□□ 0.45
CDC42BPB-203ENST00000558867 PCBP1Q15365 356 aaKnown RBP eCLIP17.86■□□□□ 0.45
CDC42BPB-203ENST00000558867 AGMOQ6ZNB7 445 aa17.86■□□□□ 0.45
CDC42BPB-203ENST00000558867 PSPC1Q8WXF1 523 aaKnown RBP17.86■□□□□ 0.45
CDC42BPB-203ENST00000558867 HINFPQ9BQA5 517 aa17.86■□□□□ 0.45
CDC42BPB-203ENST00000558867 HERC2P3Q9BVR0 1158 aa17.86■□□□□ 0.45
CDC42BPB-203ENST00000558867 VN1R3Q9BXE9 311 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms