RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 GRB10Q13322 594 aa17.37■□□□□ 0.37
HMBOX1-212ENST00000558662 ITGA9Q13797 1035 aa17.37■□□□□ 0.37
HMBOX1-212ENST00000558662 CNPY1Q3B7I2 92 aa17.37■□□□□ 0.37
HMBOX1-212ENST00000558662 SOGA3Q5TF21 947 aa17.37■□□□□ 0.37
HMBOX1-212ENST00000558662 C11orf63Q6NUN7 778 aa17.37■□□□□ 0.37
HMBOX1-212ENST00000558662 CCDC174Q6PII3 467 aa17.37■□□□□ 0.37
HMBOX1-212ENST00000558662 KIF6Q6ZMV9 814 aa17.37■□□□□ 0.37
HMBOX1-212ENST00000558662 RHOT2Q8IXI1 618 aa17.37■□□□□ 0.37
HMBOX1-212ENST00000558662 ALDH16A1Q8IZ83 802 aa17.37■□□□□ 0.37
HMBOX1-212ENST00000558662 LRRC43Q8N309 656 aa17.37■□□□□ 0.37
HMBOX1-212ENST00000558662 C12orf50Q8NA57 414 aaPredicted RBP17.37■□□□□ 0.37
HMBOX1-212ENST00000558662 BMP2KQ9NSY1 1161 aaPredicted RBP17.37■□□□□ 0.37
HMBOX1-212ENST00000558662 ERVV-2B6SEH9 535 aa17.36■□□□□ 0.37
HMBOX1-212ENST00000558662 MAP3K13O43283 966 aa17.36■□□□□ 0.37
HMBOX1-212ENST00000558662 VCAM1P19320 739 aa17.36■□□□□ 0.37
HMBOX1-212ENST00000558662 ABCD1P33897 745 aa17.36■□□□□ 0.37
HMBOX1-212ENST00000558662 HSPA2P54652 639 aa17.36■□□□□ 0.37
HMBOX1-212ENST00000558662 ARID5AQ03989 594 aa17.36■□□□□ 0.37
HMBOX1-212ENST00000558662 NEK8Q86SG6 692 aa17.36■□□□□ 0.37
HMBOX1-212ENST00000558662 PIP4K2CQ8TBX8 421 aa17.36■□□□□ 0.37
HMBOX1-212ENST00000558662 GFM2Q969S9 779 aaKnown RBP17.36■□□□□ 0.37
HMBOX1-212ENST00000558662 RBM17Q96I25 401 aaKnown RBP17.36■□□□□ 0.37
HMBOX1-212ENST00000558662 KIAA1683Q9H0B3 1180 aa17.36■□□□□ 0.37
HMBOX1-212ENST00000558662 SENP1Q9P0U3 644 aa17.36■□□□□ 0.37
HMBOX1-212ENST00000558662 CHKBQ9Y259 395 aa17.36■□□□□ 0.37
HMBOX1-212ENST00000558662 SSX2IPQ9Y2D8 614 aa17.36■□□□□ 0.37
HMBOX1-212ENST00000558662 ROBO3Q96MS0 1386 aa17.36■□□□□ 0.37
HMBOX1-212ENST00000558662 SMIM31A0A1B0GVY4 71 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 PIM1P11309 404 aaPredicted RBP17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 GNA11P29992 359 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 MAN1A1P33908 653 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 JAM2P57087 298 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 CDR2Q01850 454 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 KCNH2Q12809 1159 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 TMED1Q13445 227 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 LRRC14Q15048 493 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 TMEM119Q4V9L6 283 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 TMEM259Q4ZIN3 620 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 FAM26FQ5R3K3 315 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 C1QTNF12Q5T7M4 302 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 DPY19L2P1Q6NXN4 242 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 DGKHQ86XP1 1220 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 NT5C3AQ9H0P0 336 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 PPCSQ9HAB8 311 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 GALNT8Q9NY28 637 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 HAO1Q9UJM8 370 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 UMODL1Q5DID0 1318 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 C2CD2LO14523 706 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 ATP9BO43861 1147 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 T-ENOLP0DO92 83 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 KRT13P13646 458 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 ITIH2P19823 946 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 CYP7A1P22680 504 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 CDK7P50613 346 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 DEUP1Q05D60 604 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 MCL1Q07820 350 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 STAT4Q14765 748 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 GRM4Q14833 912 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 EXOC3L4Q17RC7 722 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 LIN52Q52LA3 116 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 ZC3H18Q86VM9 953 aaKnown RBP17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 RELL1Q8IUW5 271 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 CCDC65Q8IXS2 484 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 ST13P4Q8IZP2 240 aaPredicted RBP17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 ZNF513Q8N8E2 541 aaPredicted RBP17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 SUPT20HQ8NEM7 779 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 SLC30A5Q8TAD4 765 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 WDR66Q8TBY9 1149 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 MGARPQ8TDB4 240 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 UCMAQ8WVF2 138 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 STMN2Q93045 179 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 MKL1Q969V6 931 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 FOXP3Q9BZS1 431 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 ASCC2Q9H1I8 757 aaPredicted RBP17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 DHX36Q9H2U1 1008 aaKnown RBP17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 GREM2Q9H772 168 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 LRP2BPQ9P2M1 347 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 ITGB1BP2Q9UKP3 347 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 A0A1B0GUL6 1792 aa17.35■□□□□ 0.37
HMBOX1-212ENST00000558662 FRMPD4Q14CM0 1322 aa17.34■□□□□ 0.37
HMBOX1-212ENST00000558662 A0A1B0GVG6 124 aa17.34■□□□□ 0.37
HMBOX1-212ENST00000558662 FAM47DPA6NHR8 397 aa17.34■□□□□ 0.37
HMBOX1-212ENST00000558662 F8W8V4 182 aa17.34■□□□□ 0.37
HMBOX1-212ENST00000558662 PRPF4O43172 522 aaKnown RBP eCLIP17.34■□□□□ 0.375e-10■■■■■ 32.9
HMBOX1-212ENST00000558662 PDE8AO60658 829 aa17.34■□□□□ 0.37
HMBOX1-212ENST00000558662 TTC4O95801 387 aa17.34■□□□□ 0.37
HMBOX1-212ENST00000558662 PABPC4LP0CB38 370 aaKnown RBP17.34■□□□□ 0.37
HMBOX1-212ENST00000558662 FGFR4P22455 802 aa17.34■□□□□ 0.37
HMBOX1-212ENST00000558662 YY1P25490 414 aa17.34■□□□□ 0.37
HMBOX1-212ENST00000558662 TARSP26639 723 aaKnown RBP17.34■□□□□ 0.37
HMBOX1-212ENST00000558662 SLCO1A2P46721 670 aa17.34■□□□□ 0.37
HMBOX1-212ENST00000558662 CD151P48509 253 aa17.34■□□□□ 0.37
HMBOX1-212ENST00000558662 GALCP54803 685 aa17.34■□□□□ 0.37
HMBOX1-212ENST00000558662 PABPC4Q13310 644 aaKnown RBP eCLIP17.34■□□□□ 0.37
HMBOX1-212ENST00000558662 DCAF12L1Q5VU92 463 aa17.34■□□□□ 0.37
HMBOX1-212ENST00000558662 TNS2Q63HR2 1409 aa17.34■□□□□ 0.37
HMBOX1-212ENST00000558662 CHADLQ6NUI6 762 aa17.34■□□□□ 0.37
HMBOX1-212ENST00000558662 MAEAQ7L5Y9 396 aa17.34■□□□□ 0.37
HMBOX1-212ENST00000558662 ANKRD42Q8N9B4 389 aa17.34■□□□□ 0.37
HMBOX1-212ENST00000558662 SLC17A8Q8NDX2 589 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms