RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 ARSHQ5FYA8 562 aa17.21■□□□□ 0.35
LINC01220-201ENST00000558575 RINT1Q6NUQ1 792 aa17.21■□□□□ 0.35
LINC01220-201ENST00000558575 RHPN2Q8IUC4 686 aa17.21■□□□□ 0.35
LINC01220-201ENST00000558575 SUGP1Q8IWZ8 645 aaKnown RBP17.21■□□□□ 0.35
LINC01220-201ENST00000558575 EXOC8Q8IYI6 725 aa17.21■□□□□ 0.35
LINC01220-201ENST00000558575 FBXL6Q8N531 539 aa17.21■□□□□ 0.35
LINC01220-201ENST00000558575 ASAP3Q8TDY4 903 aa17.21■□□□□ 0.35
LINC01220-201ENST00000558575 CDK5RAP3Q96JB5 506 aa17.21■□□□□ 0.35
LINC01220-201ENST00000558575 SPATA32Q96LK8 384 aa17.21■□□□□ 0.35
LINC01220-201ENST00000558575 OSMRQ99650 979 aa17.21■□□□□ 0.35
LINC01220-201ENST00000558575 ATP6V0A4Q9HBG4 840 aa17.21■□□□□ 0.35
LINC01220-201ENST00000558575 GINS2Q9Y248 185 aa17.21■□□□□ 0.35
LINC01220-201ENST00000558575 NOC2LQ9Y3T9 749 aaKnown RBP17.21■□□□□ 0.35
LINC01220-201ENST00000558575 VPS13AQ96RL7 3174 aa17.21■□□□□ 0.35
LINC01220-201ENST00000558575 A0A087WZ62 844 aa17.2■□□□□ 0.34
LINC01220-201ENST00000558575 GLRA2P23416 452 aa17.2■□□□□ 0.34
LINC01220-201ENST00000558575 LAMTOR4Q0VGL1 99 aa17.2■□□□□ 0.34
LINC01220-201ENST00000558575 RESP18Q5W5W9 173 aa17.2■□□□□ 0.34
LINC01220-201ENST00000558575 MYOCDQ8IZQ8 938 aa17.2■□□□□ 0.34
LINC01220-201ENST00000558575 DAW1Q8N136 415 aa17.2■□□□□ 0.34
LINC01220-201ENST00000558575 RAD54LQ92698 747 aa17.2■□□□□ 0.34
LINC01220-201ENST00000558575 SAMD11Q96NU1 681 aa17.2■□□□□ 0.34
LINC01220-201ENST00000558575 FDXACB1Q9BRP7 624 aaPredicted RBP17.2■□□□□ 0.34
LINC01220-201ENST00000558575 SCAND2PQ9GZW5 306 aaPredicted RBP17.2■□□□□ 0.34
LINC01220-201ENST00000558575 IFT122Q9HBG6 1241 aa17.2■□□□□ 0.34
LINC01220-201ENST00000558575 COL4A3BPQ9Y5P4 624 aa17.2■□□□□ 0.34
LINC01220-201ENST00000558575 SQORQ9Y6N5 450 aa17.2■□□□□ 0.34
LINC01220-201ENST00000558575 GAS2O43903 313 aaKnown RBP17.19■□□□□ 0.34
LINC01220-201ENST00000558575 TBX10O75333 385 aa17.19■□□□□ 0.34
LINC01220-201ENST00000558575 CSDE1O75534 798 aaKnown RBP17.19■□□□□ 0.34
LINC01220-201ENST00000558575 CD52P31358 61 aa17.19■□□□□ 0.34
LINC01220-201ENST00000558575 ZXDAP98168 799 aa17.19■□□□□ 0.34
LINC01220-201ENST00000558575 HYAL1Q12794 435 aa17.19■□□□□ 0.34
LINC01220-201ENST00000558575 MCM6Q14566 821 aa17.19■□□□□ 0.34
LINC01220-201ENST00000558575 ADALQ6DHV7 355 aa17.19■□□□□ 0.34
LINC01220-201ENST00000558575 RTN4RL1Q86UN2 441 aaPredicted RBP17.19■□□□□ 0.34
LINC01220-201ENST00000558575 TMEM192Q8IY95 271 aa17.19■□□□□ 0.34
LINC01220-201ENST00000558575 TCP11Q8WWU5 503 aa17.19■□□□□ 0.34
LINC01220-201ENST00000558575 PSPC1Q8WXF1 523 aaKnown RBP17.19■□□□□ 0.34
LINC01220-201ENST00000558575 BSNDQ8WZ55 320 aa17.19■□□□□ 0.34
LINC01220-201ENST00000558575 CCDC43Q96MW1 224 aaKnown RBP17.19■□□□□ 0.34
LINC01220-201ENST00000558575 POLR3FQ9H1D9 316 aaPredicted RBP17.19■□□□□ 0.34
LINC01220-201ENST00000558575 PADI3Q9ULW8 664 aa17.19■□□□□ 0.34
LINC01220-201ENST00000558575 NPHP3-ACAD11A0A0J9YXS1 232 aa17.18■□□□□ 0.34
LINC01220-201ENST00000558575 M0QZ92 97 aa17.18■□□□□ 0.34
LINC01220-201ENST00000558575 ASAP2O43150 1006 aa17.18■□□□□ 0.34
LINC01220-201ENST00000558575 SSBP05455 408 aaKnown RBP eCLIP17.18■□□□□ 0.34
LINC01220-201ENST00000558575 SRGAP2CP0DJJ0 459 aa17.18■□□□□ 0.34
LINC01220-201ENST00000558575 DARSP14868 501 aaKnown RBP17.18■□□□□ 0.34
LINC01220-201ENST00000558575 EIF4BP23588 611 aaKnown RBP17.18■□□□□ 0.34
LINC01220-201ENST00000558575 GTF2F1P35269 517 aaKnown RBP eCLIP17.18■□□□□ 0.34
LINC01220-201ENST00000558575 CDC42EP1Q00587 391 aa17.18■□□□□ 0.34
LINC01220-201ENST00000558575 MAPK7Q13164 816 aa17.18■□□□□ 0.34
LINC01220-201ENST00000558575 SMAD4Q13485 552 aaKnown RBP17.18■□□□□ 0.34
LINC01220-201ENST00000558575 E2F4Q16254 413 aa17.18■□□□□ 0.34
LINC01220-201ENST00000558575 FAM102BQ5T8I3 360 aa17.18■□□□□ 0.34
LINC01220-201ENST00000558575 RRAGBQ5VZM2 374 aa17.18■□□□□ 0.34
LINC01220-201ENST00000558575 TSHZ1Q6ZSZ6 1077 aa17.18■□□□□ 0.34
LINC01220-201ENST00000558575 ASCL5Q7RTU5 278 aa17.18■□□□□ 0.34
LINC01220-201ENST00000558575 FAM228AQ86W67 206 aa17.18■□□□□ 0.34
LINC01220-201ENST00000558575 ZNF710Q8N1W2 664 aa17.18■□□□□ 0.34
LINC01220-201ENST00000558575 PDILTQ8N807 584 aa17.18■□□□□ 0.34
LINC01220-201ENST00000558575 MCPH1Q8NEM0 835 aa17.18■□□□□ 0.34
LINC01220-201ENST00000558575 ATOH1Q92858 354 aaPredicted RBP17.18■□□□□ 0.34
LINC01220-201ENST00000558575 IFIH1Q9BYX4 1025 aaKnown RBP17.18■□□□□ 0.34
LINC01220-201ENST00000558575 TMX1Q9H3N1 280 aa17.18■□□□□ 0.34
LINC01220-201ENST00000558575 MINDY3Q9H8M7 445 aa17.18■□□□□ 0.34
LINC01220-201ENST00000558575 ERVK-5Q9HDB9 667 aa17.18■□□□□ 0.34
LINC01220-201ENST00000558575 CCDC39Q9UFE4 941 aa17.18■□□□□ 0.34
LINC01220-201ENST00000558575 TCHHQ07283 1943 aa17.17■□□□□ 0.34
LINC01220-201ENST00000558575 LINC01565O15544 149 aa17.17■□□□□ 0.34
LINC01220-201ENST00000558575 AMHP03971 560 aa17.17■□□□□ 0.34
LINC01220-201ENST00000558575 FGFR4P22455 802 aa17.17■□□□□ 0.34
LINC01220-201ENST00000558575 CMA1P23946 247 aa17.17■□□□□ 0.34
LINC01220-201ENST00000558575 CAPSQ13938 189 aa17.17■□□□□ 0.34
LINC01220-201ENST00000558575 DHX8Q14562 1220 aaKnown RBP17.17■□□□□ 0.34
LINC01220-201ENST00000558575 ZNF410Q86VK4 478 aa17.17■□□□□ 0.34
LINC01220-201ENST00000558575 RASSF8Q8NHQ8 419 aa17.17■□□□□ 0.34
LINC01220-201ENST00000558575 NLRP7Q8WX94 980 aa17.17■□□□□ 0.34
LINC01220-201ENST00000558575 SEPT8Q92599 483 aa17.17■□□□□ 0.34
LINC01220-201ENST00000558575 LARP4BQ92615 738 aaKnown RBP17.17■□□□□ 0.34
LINC01220-201ENST00000558575 NLRP4Q96MN2 994 aa17.17■□□□□ 0.34
LINC01220-201ENST00000558575 PLXNA4Q9HCM2 1894 aa17.17■□□□□ 0.34
LINC01220-201ENST00000558575 ST3GAL5Q9UNP4 418 aa17.17■□□□□ 0.34
LINC01220-201ENST00000558575 MYO10Q9HD67 2058 aa17.17■□□□□ 0.34
LINC01220-201ENST00000558575 SFI1A8K8P3 1242 aa17.16■□□□□ 0.34
LINC01220-201ENST00000558575 RPS6KA5O75582 802 aa17.16■□□□□ 0.34
LINC01220-201ENST00000558575 GUCY2CP25092 1073 aa17.16■□□□□ 0.34
LINC01220-201ENST00000558575 TXLNAP40222 546 aa17.16■□□□□ 0.34
LINC01220-201ENST00000558575 PTENP60484 403 aa17.16■□□□□ 0.34
LINC01220-201ENST00000558575 RAD51AP2Q09MP3 1159 aa17.16■□□□□ 0.34
LINC01220-201ENST00000558575 MXD4Q14582 209 aaPredicted RBP17.16■□□□□ 0.34
LINC01220-201ENST00000558575 CCDC73Q6ZRK6 1079 aa17.16■□□□□ 0.34
LINC01220-201ENST00000558575 RNF149Q8NC42 400 aa17.16■□□□□ 0.34
LINC01220-201ENST00000558575 LINC01599Q8WXQ3 324 aa17.16■□□□□ 0.34
LINC01220-201ENST00000558575 GCOM2Q9BZD3 368 aaPredicted RBP17.16■□□□□ 0.34
LINC01220-201ENST00000558575 STK17AQ9UEE5 414 aa17.16■□□□□ 0.34
LINC01220-201ENST00000558575 ARID2Q68CP9 1835 aa17.16■□□□□ 0.34
LINC01220-201ENST00000558575 FAM237AA0A1B0GTK4 181 aa17.15■□□□□ 0.34
LINC01220-201ENST00000558575 A0A1B0GVL5 298 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms