RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 FANCLQ9NW38 375 aa16.32■□□□□ 0.2
VPS18-202ENST00000558474 A0A087WZ62 844 aa16.31■□□□□ 0.2
VPS18-202ENST00000558474 M0QZ92 97 aa16.31■□□□□ 0.2
VPS18-202ENST00000558474 ACKR2O00590 384 aa16.31■□□□□ 0.2
VPS18-202ENST00000558474 CETN3O15182 167 aa16.31■□□□□ 0.2
VPS18-202ENST00000558474 VTNP04004 478 aa16.31■□□□□ 0.2
VPS18-202ENST00000558474 GARTP22102 1010 aa16.31■□□□□ 0.2
VPS18-202ENST00000558474 EEF1GP26641 437 aaKnown RBP16.31■□□□□ 0.2
VPS18-202ENST00000558474 CRYBB1P53674 252 aaPredicted RBP16.31■□□□□ 0.2
VPS18-202ENST00000558474 ZNF200P98182 395 aaPredicted RBP16.31■□□□□ 0.2
VPS18-202ENST00000558474 KCNA1Q09470 495 aa16.31■□□□□ 0.2
VPS18-202ENST00000558474 SARM1Q6SZW1 724 aa16.31■□□□□ 0.2
VPS18-202ENST00000558474 FAM43BQ6ZT52 329 aaPredicted RBP16.31■□□□□ 0.2
VPS18-202ENST00000558474 ANKRD20A12PQ8NF67 263 aa16.31■□□□□ 0.2
VPS18-202ENST00000558474 NLRP7Q8WX94 980 aa16.31■□□□□ 0.2
VPS18-202ENST00000558474 ZBTB10Q96DT7 871 aa16.31■□□□□ 0.2
VPS18-202ENST00000558474 CTAGE1Q96RT6 745 aa16.31■□□□□ 0.2
VPS18-202ENST00000558474 FDXACB1Q9BRP7 624 aaPredicted RBP16.31■□□□□ 0.2
VPS18-202ENST00000558474 MKNK1Q9BUB5 465 aa16.31■□□□□ 0.2
VPS18-202ENST00000558474 SRRTQ9BXP5 876 aaKnown RBP16.31■□□□□ 0.2
VPS18-202ENST00000558474 MRPL4Q9BYD3 311 aaKnown RBP16.31■□□□□ 0.2
VPS18-202ENST00000558474 FAM49AQ9H0Q0 323 aaPredicted RBP16.31■□□□□ 0.2
VPS18-202ENST00000558474 HSD3B7Q9H2F3 369 aa16.31■□□□□ 0.2
VPS18-202ENST00000558474 AGPAT3Q9NRZ7 376 aa16.31■□□□□ 0.2
VPS18-202ENST00000558474 DMAC2Q9NW81 257 aa16.31■□□□□ 0.2
VPS18-202ENST00000558474 STYXL1Q9Y6J8 313 aa16.31■□□□□ 0.2
VPS18-202ENST00000558474 HNRNPDLO14979 420 aaKnown RBP16.3■□□□□ 0.2
VPS18-202ENST00000558474 MAPK13O15264 365 aa16.3■□□□□ 0.2
VPS18-202ENST00000558474 SLC16A3O15427 465 aaKnown RBP16.3■□□□□ 0.2
VPS18-202ENST00000558474 NR3C1P04150 777 aa16.3■□□□□ 0.2
VPS18-202ENST00000558474 PRKCBP05771 671 aa16.3■□□□□ 0.2
VPS18-202ENST00000558474 NR2F2P24468 414 aa16.3■□□□□ 0.2
VPS18-202ENST00000558474 MARSP56192 900 aaKnown RBP16.3■□□□□ 0.2
VPS18-202ENST00000558474 MBTD1Q05BQ5 628 aa16.3■□□□□ 0.2
VPS18-202ENST00000558474 ADAM9Q13443 819 aa16.3■□□□□ 0.2
VPS18-202ENST00000558474 LRRC55Q6ZSA7 311 aa16.3■□□□□ 0.2
VPS18-202ENST00000558474 TMEM106CQ9BVX2 250 aa16.3■□□□□ 0.2
VPS18-202ENST00000558474 MAGEC2Q9UBF1 373 aaPredicted RBP16.3■□□□□ 0.2
VPS18-202ENST00000558474 NOD1Q9Y239 953 aa16.3■□□□□ 0.2
VPS18-202ENST00000558474 SQORQ9Y6N5 450 aa16.3■□□□□ 0.2
VPS18-202ENST00000558474 LRRC10BA6NIK2 292 aa16.29■□□□□ 0.2
VPS18-202ENST00000558474 INO80B-WBP1J3KQ70 363 aa16.29■□□□□ 0.2
VPS18-202ENST00000558474 COL6A1P12109 1028 aa16.29■□□□□ 0.2
VPS18-202ENST00000558474 DARSP14868 501 aaKnown RBP16.29■□□□□ 0.2
VPS18-202ENST00000558474 CDK11BP21127 795 aaKnown RBP16.29■□□□□ 0.2
VPS18-202ENST00000558474 EIF4BP23588 611 aaKnown RBP16.29■□□□□ 0.2
VPS18-202ENST00000558474 AXLP30530 894 aa16.29■□□□□ 0.2
VPS18-202ENST00000558474 LIG4P49917 911 aa16.29■□□□□ 0.2
VPS18-202ENST00000558474 MRPS6P82932 125 aaKnown RBP16.29■□□□□ 0.2
VPS18-202ENST00000558474 ENPEPQ07075 957 aa16.29■□□□□ 0.2
VPS18-202ENST00000558474 RBL2Q08999 1139 aa16.29■□□□□ 0.2
VPS18-202ENST00000558474 NCBP1Q09161 790 aaKnown RBP16.29■□□□□ 0.2
VPS18-202ENST00000558474 TSHZ1Q6ZSZ6 1077 aa16.29■□□□□ 0.2
VPS18-202ENST00000558474 CCDC155Q8N6L0 562 aa16.29■□□□□ 0.2
VPS18-202ENST00000558474 BICD1Q96G01 975 aa16.29■□□□□ 0.2
VPS18-202ENST00000558474 SCLT1Q96NL6 688 aa16.29■□□□□ 0.2
VPS18-202ENST00000558474 CELF4Q9BZC1 486 aaKnown RBP16.29■□□□□ 0.2
VPS18-202ENST00000558474 MCOLN1Q9GZU1 580 aa16.29■□□□□ 0.2
VPS18-202ENST00000558474 METTL14Q9HCE5 456 aaKnown RBP16.29■□□□□ 0.2
VPS18-202ENST00000558474 KIAA1586Q9HCI6 787 aa16.29■□□□□ 0.2
VPS18-202ENST00000558474 SAMSN1Q9NSI8 373 aaKnown RBP16.29■□□□□ 0.2
VPS18-202ENST00000558474 TRPV2Q9Y5S1 764 aa16.29■□□□□ 0.2
VPS18-202ENST00000558474 CNTNAP2Q9UHC6 1331 aa16.28■□□□□ 0.2
VPS18-202ENST00000558474 TLR3O15455 904 aaKnown RBP16.28■□□□□ 0.2
VPS18-202ENST00000558474 TOM1L1O75674 476 aa16.28■□□□□ 0.2
VPS18-202ENST00000558474 LDHAP00338 332 aaKnown RBP16.28■□□□□ 0.2
VPS18-202ENST00000558474 MYCP01106 439 aaPredicted RBP16.28■□□□□ 0.2
VPS18-202ENST00000558474 SFPQP23246 707 aaKnown RBP eCLIP16.28■□□□□ 0.2
VPS18-202ENST00000558474 MNX1P50219 401 aaPredicted RBP16.28■□□□□ 0.2
VPS18-202ENST00000558474 PPP2R3AQ06190 1150 aa16.28■□□□□ 0.2
VPS18-202ENST00000558474 PRPF4BQ13523 1007 aaKnown RBP16.28■□□□□ 0.2
VPS18-202ENST00000558474 SNX17Q15036 470 aa16.28■□□□□ 0.2
VPS18-202ENST00000558474 KIZQ2M2Z5 673 aa16.28■□□□□ 0.2
VPS18-202ENST00000558474 TCP11X2Q5H9J9 407 aa16.28■□□□□ 0.2
VPS18-202ENST00000558474 FAM26DQ5JW98 314 aa16.28■□□□□ 0.2
VPS18-202ENST00000558474 ARMCX5Q6P1M9 558 aa16.28■□□□□ 0.2
VPS18-202ENST00000558474 ANKRD33Q7Z3H0 272 aa16.28■□□□□ 0.2
VPS18-202ENST00000558474 APBB1IPQ7Z5R6 666 aaPredicted RBP16.28■□□□□ 0.2
VPS18-202ENST00000558474 FRMD5Q7Z6J6 570 aa16.28■□□□□ 0.2
VPS18-202ENST00000558474 IRF2BP1Q8IU81 584 aa16.28■□□□□ 0.2
VPS18-202ENST00000558474 CAGE1Q8TC20 777 aa16.28■□□□□ 0.2
VPS18-202ENST00000558474 TOX2Q96NM4 488 aa16.28■□□□□ 0.2
VPS18-202ENST00000558474 ACO2Q99798 780 aaKnown RBP16.28■□□□□ 0.2
VPS18-202ENST00000558474 LIMA1Q9UHB6 759 aaKnown RBP16.28■□□□□ 0.2
VPS18-202ENST00000558474 TNFSF13BQ9Y275 285 aa16.28■□□□□ 0.2
VPS18-202ENST00000558474 FRMD4BQ9Y2L6 1034 aa16.28■□□□□ 0.2
VPS18-202ENST00000558474 KCNJ18B7U540 433 aa16.27■□□□□ 0.2
VPS18-202ENST00000558474 B4GALT4O60513 344 aa16.27■□□□□ 0.2
VPS18-202ENST00000558474 CD4P01730 458 aa16.27■□□□□ 0.2
VPS18-202ENST00000558474 TPM2P07951 284 aa16.27■□□□□ 0.2
VPS18-202ENST00000558474 EPB41P11171 864 aaKnown RBP16.27■□□□□ 0.2
VPS18-202ENST00000558474 PROZP22891 400 aa16.27■□□□□ 0.2
VPS18-202ENST00000558474 PSMC2P35998 433 aaKnown RBP16.27■□□□□ 0.2
VPS18-202ENST00000558474 MCCD1P59942 119 aaPredicted RBP16.27■□□□□ 0.2
VPS18-202ENST00000558474 POU5F1Q01860 360 aaKnown RBP16.27■□□□□ 0.2
VPS18-202ENST00000558474 MGAT3Q09327 533 aa16.27■□□□□ 0.2
VPS18-202ENST00000558474 KCNJ12Q14500 433 aa16.27■□□□□ 0.2
VPS18-202ENST00000558474 AMHR2Q16671 573 aa16.27■□□□□ 0.2
VPS18-202ENST00000558474 TRIM71Q2Q1W2 868 aaKnown RBP16.27■□□□□ 0.2
VPS18-202ENST00000558474 SLC39A4Q6P5W5 647 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms