RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 RBAK-RBAKDNI3L0D1 243 aa12.64□□□□□ -0.39
RORA-207ENST00000558234 MEFVO15553 781 aaPredicted RBP12.64□□□□□ -0.39
RORA-207ENST00000558234 TIMP1P01033 207 aa12.64□□□□□ -0.39
RORA-207ENST00000558234 CYP2C9P11712 490 aa12.64□□□□□ -0.39
RORA-207ENST00000558234 NPTX2P47972 431 aa12.64□□□□□ -0.39
RORA-207ENST00000558234 TBC1D8BQ0IIM8 1120 aa12.64□□□□□ -0.39
RORA-207ENST00000558234 LPIN1Q14693 890 aa12.64□□□□□ -0.39
RORA-207ENST00000558234 KRT31Q15323 416 aa12.64□□□□□ -0.39
RORA-207ENST00000558234 LINC01599Q8WXQ3 324 aa12.64□□□□□ -0.39
RORA-207ENST00000558234 TMEM143Q96AN5 459 aa12.64□□□□□ -0.39
RORA-207ENST00000558234 CHD9Q3L8U1 2897 aa12.64□□□□□ -0.39
RORA-207ENST00000558234 UBE4BO95155 1302 aa12.63□□□□□ -0.39
RORA-207ENST00000558234 USO1O60763 962 aaKnown RBP12.63□□□□□ -0.39
RORA-207ENST00000558234 ASIC1P78348 528 aa12.63□□□□□ -0.39
RORA-207ENST00000558234 MXD4Q14582 209 aaPredicted RBP12.63□□□□□ -0.39
RORA-207ENST00000558234 PCBP1Q15365 356 aaKnown RBP eCLIP12.63□□□□□ -0.39
RORA-207ENST00000558234 SLC39A4Q6P5W5 647 aa12.63□□□□□ -0.39
RORA-207ENST00000558234 C16orf59Q7L2K0 433 aa12.63□□□□□ -0.39
RORA-207ENST00000558234 DYMQ7RTS9 669 aa12.63□□□□□ -0.39
RORA-207ENST00000558234 ZNF720Q7Z2F6 126 aa12.63□□□□□ -0.39
RORA-207ENST00000558234 DNAJB3Q8WWF6 145 aa12.63□□□□□ -0.39
RORA-207ENST00000558234 COL4A3BPQ9Y5P4 624 aa12.63□□□□□ -0.39
RORA-207ENST00000558234 PHLPP2Q6ZVD8 1323 aa12.63□□□□□ -0.39
RORA-207ENST00000558234 EIF3DO15371 548 aaKnown RBP eCLIP12.63□□□□□ -0.391e-7■□□□□ 8.3
RORA-207ENST00000558234 DARSP14868 501 aaKnown RBP12.63□□□□□ -0.39
RORA-207ENST00000558234 HOXA11P31270 313 aaPredicted RBP12.63□□□□□ -0.39
RORA-207ENST00000558234 LRRC63Q05C16 580 aa12.63□□□□□ -0.39
RORA-207ENST00000558234 PLEKHG4Q58EX7 1191 aa12.63□□□□□ -0.39
RORA-207ENST00000558234 LRRC8AQ8IWT6 810 aa12.63□□□□□ -0.39
RORA-207ENST00000558234 CACTINQ8WUQ7 758 aaKnown RBP12.63□□□□□ -0.39
RORA-207ENST00000558234 SLC7A3Q8WY07 619 aa12.63□□□□□ -0.39
RORA-207ENST00000558234 DRC1Q96MC2 740 aa12.63□□□□□ -0.39
RORA-207ENST00000558234 HAPLN2Q9GZV7 340 aa12.63□□□□□ -0.39
RORA-207ENST00000558234 SLC39A2Q9NP94 309 aa12.63□□□□□ -0.39
RORA-207ENST00000558234 SPTLC3Q9NUV7 552 aa12.63□□□□□ -0.39
RORA-207ENST00000558234 SUCLA2Q9P2R7 463 aaPredicted RBP12.63□□□□□ -0.39
RORA-207ENST00000558234 CITO14578 2027 aa12.63□□□□□ -0.39
RORA-207ENST00000558234 TTLL13PA6NNM8 815 aa12.63□□□□□ -0.39
RORA-207ENST00000558234 GOLGA6L19H0YKK7 550 aa12.63□□□□□ -0.39
RORA-207ENST00000558234 TEX33O43247 280 aa12.63□□□□□ -0.39
RORA-207ENST00000558234 TGFB1I1O43294 461 aa12.63□□□□□ -0.39
RORA-207ENST00000558234 POLGP54098 1239 aaPredicted RBP12.63□□□□□ -0.39
RORA-207ENST00000558234 KSR1Q8IVT5 923 aa12.63□□□□□ -0.39
RORA-207ENST00000558234 CELF4Q9BZC1 486 aaKnown RBP12.63□□□□□ -0.39
RORA-207ENST00000558234 DMAC2Q9NW81 257 aa12.63□□□□□ -0.39
RORA-207ENST00000558234 TRPV2Q9Y5S1 764 aa12.63□□□□□ -0.39
RORA-207ENST00000558234 CNTNAP2Q9UHC6 1331 aa12.63□□□□□ -0.39
RORA-207ENST00000558234 ADRB2P07550 413 aa12.62□□□□□ -0.39
RORA-207ENST00000558234 RFC2P35250 354 aa12.62□□□□□ -0.39
RORA-207ENST00000558234 HVCN1Q96D96 273 aa12.62□□□□□ -0.39
RORA-207ENST00000558234 EXOC1Q9NV70 894 aa12.62□□□□□ -0.39
RORA-207ENST00000558234 TTC3P53804 2025 aa12.62□□□□□ -0.39
RORA-207ENST00000558234 INPPL1O15357 1258 aa12.62□□□□□ -0.39
RORA-207ENST00000558234 GAP43P17677 238 aa12.62□□□□□ -0.39
RORA-207ENST00000558234 EEF1GP26641 437 aaKnown RBP12.62□□□□□ -0.39
RORA-207ENST00000558234 CDC42EP1Q00587 391 aa12.62□□□□□ -0.39
RORA-207ENST00000558234 FAM228AQ86W67 206 aa12.62□□□□□ -0.39
RORA-207ENST00000558234 RETREG2Q8NC44 543 aa12.62□□□□□ -0.39
RORA-207ENST00000558234 BECN2A8MW95 431 aa12.62□□□□□ -0.39
RORA-207ENST00000558234 UBXN11Q5T124 520 aa12.62□□□□□ -0.39
RORA-207ENST00000558234 MAP4K3Q8IVH8 894 aa12.62□□□□□ -0.39
RORA-207ENST00000558234 NOC3LQ8WTT2 800 aaKnown RBP12.62□□□□□ -0.39
RORA-207ENST00000558234 VTNP04004 478 aa12.61□□□□□ -0.39
RORA-207ENST00000558234 SELPP16109 830 aa12.61□□□□□ -0.39
RORA-207ENST00000558234 KCNJ6P48051 423 aa12.61□□□□□ -0.39
RORA-207ENST00000558234 EDRF1Q3B7T1 1238 aa12.61□□□□□ -0.39
RORA-207ENST00000558234 SRGAP1Q7Z6B7 1085 aa12.61□□□□□ -0.39
RORA-207ENST00000558234 ZSCAN30Q86W11 494 aa12.61□□□□□ -0.39
RORA-207ENST00000558234 KIAA1524Q8TCG1 905 aa12.61□□□□□ -0.39
RORA-207ENST00000558234 TRIM5Q9C035 493 aa12.61□□□□□ -0.39
RORA-207ENST00000558234 AGO3Q9H9G7 860 aaKnown RBP12.61□□□□□ -0.39
RORA-207ENST00000558234 RC3H2Q9HBD1 1191 aaKnown RBP12.61□□□□□ -0.39
RORA-207ENST00000558234 CDY2AQ9Y6F7 541 aa12.61□□□□□ -0.39
RORA-207ENST00000558234 STX17P56962 302 aa12.61□□□□□ -0.39
RORA-207ENST00000558234 CEP135Q66GS9 1140 aa12.61□□□□□ -0.39
RORA-207ENST00000558234 LRRC8DQ7L1W4 858 aa12.61□□□□□ -0.39
RORA-207ENST00000558234 TC2NQ8N9U0 490 aa12.61□□□□□ -0.39
RORA-207ENST00000558234 CDK5RAP3Q96JB5 506 aa12.61□□□□□ -0.39
RORA-207ENST00000558234 PARVGQ9HBI0 331 aa12.61□□□□□ -0.39
RORA-207ENST00000558234 KIAA0100Q14667 2235 aaKnown RBP12.61□□□□□ -0.39
RORA-207ENST00000558234 RNF225M0QZC1 329 aaPredicted RBP12.61□□□□□ -0.39
RORA-207ENST00000558234 TSPAN1O60635 241 aa12.61□□□□□ -0.39
RORA-207ENST00000558234 SFR1Q86XK3 245 aa12.61□□□□□ -0.39
RORA-207ENST00000558234 PSPC1Q8WXF1 523 aaKnown RBP12.61□□□□□ -0.39
RORA-207ENST00000558234 MAPK8IP1Q9UQF2 711 aa12.61□□□□□ -0.39
RORA-207ENST00000558234 LAMA2P24043 3122 aaKnown RBP12.61□□□□□ -0.39
RORA-207ENST00000558234 KCNJ18B7U540 433 aa12.6□□□□□ -0.39
RORA-207ENST00000558234 PARNO95453 639 aaKnown RBP12.6□□□□□ -0.39
RORA-207ENST00000558234 MYBP10242 640 aa12.6□□□□□ -0.39
RORA-207ENST00000558234 UBASH3AP57075 661 aa12.6□□□□□ -0.39
RORA-207ENST00000558234 KCNJ12Q14500 433 aa12.6□□□□□ -0.39
RORA-207ENST00000558234 FAM26FQ5R3K3 315 aa12.6□□□□□ -0.39
RORA-207ENST00000558234 MFSD5Q6N075 450 aa12.6□□□□□ -0.39
RORA-207ENST00000558234 TSHZ1Q6ZSZ6 1077 aa12.6□□□□□ -0.39
RORA-207ENST00000558234 RTN4RL1Q86UN2 441 aaPredicted RBP12.6□□□□□ -0.39
RORA-207ENST00000558234 IGBP1P78318 339 aa12.6□□□□□ -0.39
RORA-207ENST00000558234 FAM189BP81408 668 aa12.6□□□□□ -0.39
RORA-207ENST00000558234 CACNB1Q02641 598 aaPredicted RBP12.6□□□□□ -0.39
RORA-207ENST00000558234 C12orf56Q8IXR9 622 aa12.6□□□□□ -0.39
RORA-207ENST00000558234 AGPAT5Q9NUQ2 364 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms