RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 SREBF1P36956 1147 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 LIFRP42702 1097 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 MAGEA9P43362 315 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 PHKA2P46019 1235 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 DNM2P50570 870 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 RAB27AP51159 221 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 ADCY7P51828 1080 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 NAPAP54920 295 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 ANTXR2P58335 489 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 STARD6P59095 220 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 NUCB1Q02818 461 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 LMNB2Q03252 620 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 PTH1RQ03431 593 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 CSTF1Q05048 431 aaKnown RBP5.85□□□□□ -1.47
SPG11-208ENST00000558155 AP3B2Q13367 1082 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 ST3GAL2Q16842 350 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 TMEM173Q86WV6 379 aaPredicted RBP5.85□□□□□ -1.47
SPG11-208ENST00000558155 MB21D2Q8IYB1 491 aaPredicted RBP5.85□□□□□ -1.47
SPG11-208ENST00000558155 LRRC71Q8N4P6 559 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 PJA1Q8NG27 643 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 URGCPQ8TCY9 931 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 GPR152Q8TDT2 470 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 SMG7Q92540 1137 aaKnown RBP5.85□□□□□ -1.47
SPG11-208ENST00000558155 PHKBQ93100 1093 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 PGBD1Q96JS3 809 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 ZNF668Q96K58 619 aaPredicted RBP5.85□□□□□ -1.47
SPG11-208ENST00000558155 NELL2Q99435 816 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 TMEM175Q9BSA9 504 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 ZNF577Q9BSK1 485 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 ANO3Q9BYT9 981 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 ADAM33Q9BZ11 813 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 GBP3Q9H0R5 595 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 PLEKHA4Q9H4M7 779 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 MAN1C1Q9NR34 630 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 ARHGEF3Q9NR81 526 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 SLC2A4RGQ9NR83 387 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 TBC1D13Q9NVG8 400 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 SPATA6Q9NWH7 488 aaPredicted RBP5.85□□□□□ -1.47
SPG11-208ENST00000558155 FBXO4Q9UKT5 387 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 INPP5FQ9Y2H2 1132 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 SAMM50Q9Y512 469 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 PCDHGA2Q9Y5H1 932 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 ZFP37Q9Y6Q3 630 aaPredicted RBP5.85□□□□□ -1.47
SPG11-208ENST00000558155 C2orf16Q68DN1 1984 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 DENND4AQ7Z401 1863 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 TRIOO75962 3097 aa5.85□□□□□ -1.47
SPG11-208ENST00000558155 MTCL1Q9Y4B5 1905 aaKnown RBP5.84□□□□□ -1.47
SPG11-208ENST00000558155 CLUHO75153 1309 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 KANSL1LA0AUZ9 987 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 DCDC2BA2VCK2 349 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 WDR64B1ANS9 1081 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 ANHXE9PGG2 379 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 FAM86B1E9PN63 330 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 hCG_1984214I3L0E3 225 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 C2CD2LO14523 706 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 NCAM2O15394 837 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 PRC1O43663 620 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 N4BP1O75113 896 aaKnown RBP5.84□□□□□ -1.47
SPG11-208ENST00000558155 NR1I2O75469 434 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 GLUD1P00367 558 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 SOD2P04179 222 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 URODP06132 367 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 CYP3A4P08684 503 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 FAM86B2P0C5J1 330 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 RXRAP19793 462 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 SLC11A1P49279 550 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 AK2P54819 239 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 PRKCQQ04759 706 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 LONRF3Q496Y0 759 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 SLC44A4Q53GD3 710 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 DIEXFQ68CQ4 756 aaKnown RBP5.84□□□□□ -1.47
SPG11-208ENST00000558155 WWC2Q6AWC2 1192 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 PPP1R18Q6NYC8 613 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 RSPO2Q6UXX9 243 aaPredicted RBP5.84□□□□□ -1.47
SPG11-208ENST00000558155 TMTC3Q6ZXV5 915 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 MAML2Q8IZL2 1156 aaPredicted RBP5.84□□□□□ -1.47
SPG11-208ENST00000558155 LINC01465Q8N7H1 131 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 ZNF713Q8N859 430 aaPredicted RBP5.84□□□□□ -1.47
SPG11-208ENST00000558155 FEZF2Q8TBJ5 459 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 LPPQ93052 612 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 RPS6KC1Q96S38 1066 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 MYADMQ96S97 322 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 OSBPL6Q9BZF3 934 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 NT5C3AQ9H0P0 336 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 RXFP1Q9HBX9 757 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 UBN1Q9NPG3 1134 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 RTN4Q9NQC3 1192 aaKnown RBP5.84□□□□□ -1.47
SPG11-208ENST00000558155 FAM105AQ9NUU6 356 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 RBM28Q9NW13 759 aaKnown RBP5.84□□□□□ -1.47
SPG11-208ENST00000558155 ZSCAN32Q9NX65 697 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 DNAJB4Q9UDY4 337 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 GMEB2Q9UKD1 530 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 USP18Q9UMW8 372 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 V9GY48 417 aaPredicted RBP5.84□□□□□ -1.47
SPG11-208ENST00000558155 CFAP54Q96N23 3096 aa5.84□□□□□ -1.47
SPG11-208ENST00000558155 OTOGLQ3ZCN5 2332 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 DOCK8Q8NF50 2099 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 A0A087WZ62 844 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 FAM170BA6NMN3 283 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 SH2B2O14492 632 aaPredicted RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms