RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 GBP3Q9H0R5 595 aa15.17■□□□□ 0.02
SNRPA1-204ENST00000558020 ADAM7Q9H2U9 754 aa15.17■□□□□ 0.02
SNRPA1-204ENST00000558020 NRDE2Q9H7Z3 1164 aa15.17■□□□□ 0.02
SNRPA1-204ENST00000558020 TTC12Q9H892 705 aaPredicted RBP15.17■□□□□ 0.02
SNRPA1-204ENST00000558020 ANKEF1Q9NU02 776 aa15.17■□□□□ 0.02
SNRPA1-204ENST00000558020 DZANK1Q9NVP4 752 aa15.17■□□□□ 0.02
SNRPA1-204ENST00000558020 WRAP73Q9P2S5 460 aaPredicted RBP15.17■□□□□ 0.02
SNRPA1-204ENST00000558020 HCFC2Q9Y5Z7 792 aa15.17■□□□□ 0.02
SNRPA1-204ENST00000558020 IRAK3Q9Y616 596 aa15.17■□□□□ 0.02
SNRPA1-204ENST00000558020 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.16■□□□□ 0.02
SNRPA1-204ENST00000558020 TMEM221A6NGB7 291 aa15.16■□□□□ 0.02
SNRPA1-204ENST00000558020 M0R296 226 aa15.16■□□□□ 0.02
SNRPA1-204ENST00000558020 NEMFO60524 1076 aa15.16■□□□□ 0.02
SNRPA1-204ENST00000558020 CLASP2O75122 1294 aaKnown RBP15.16■□□□□ 0.02
SNRPA1-204ENST00000558020 NR1I2O75469 434 aa15.16■□□□□ 0.02
SNRPA1-204ENST00000558020 DGAT1O75907 488 aa15.16■□□□□ 0.02
SNRPA1-204ENST00000558020 LYPLA2O95372 231 aa15.16■□□□□ 0.02
SNRPA1-204ENST00000558020 CTSAP10619 480 aa15.16■□□□□ 0.02
SNRPA1-204ENST00000558020 XRCC6P12956 609 aaKnown RBP eCLIP15.16■□□□□ 0.02
SNRPA1-204ENST00000558020 FDPSP14324 419 aaKnown RBP15.16■□□□□ 0.02
SNRPA1-204ENST00000558020 MTHFRP42898 656 aa15.16■□□□□ 0.02
SNRPA1-204ENST00000558020 SPIRE1Q08AE8 756 aa15.16■□□□□ 0.02
SNRPA1-204ENST00000558020 ME3Q16798 604 aa15.16■□□□□ 0.02
SNRPA1-204ENST00000558020 ATAT1Q5SQI0 421 aa15.16■□□□□ 0.02
SNRPA1-204ENST00000558020 ZBTB33Q86T24 672 aa15.16■□□□□ 0.02
SNRPA1-204ENST00000558020 SUGP1Q8IWZ8 645 aaKnown RBP15.16■□□□□ 0.02
SNRPA1-204ENST00000558020 HACE1Q8IYU2 909 aa15.16■□□□□ 0.02
SNRPA1-204ENST00000558020 CCDC51Q96ER9 411 aa15.16■□□□□ 0.02
SNRPA1-204ENST00000558020 PRRX2Q99811 253 aa15.16■□□□□ 0.02
SNRPA1-204ENST00000558020 HSD17B14Q9BPX1 270 aa15.16■□□□□ 0.02
SNRPA1-204ENST00000558020 EIF2AK1Q9BQI3 630 aaKnown RBP15.16■□□□□ 0.02
SNRPA1-204ENST00000558020 APOL5Q9BWW9 433 aa15.16■□□□□ 0.02
SNRPA1-204ENST00000558020 RSAD1Q9HA92 442 aa15.16■□□□□ 0.02
SNRPA1-204ENST00000558020 FAN1Q9Y2M0 1017 aa15.16■□□□□ 0.02
SNRPA1-204ENST00000558020 BTBD18B2RXH4 712 aa15.15■□□□□ 0.02
SNRPA1-204ENST00000558020 ITGA4P13612 1032 aa15.15■□□□□ 0.02
SNRPA1-204ENST00000558020 HOXA11P31270 313 aaPredicted RBP15.15■□□□□ 0.02
SNRPA1-204ENST00000558020 TXKP42681 527 aa15.15■□□□□ 0.02
SNRPA1-204ENST00000558020 EARS2Q5JPH6 523 aaKnown RBP15.15■□□□□ 0.02
SNRPA1-204ENST00000558020 NOTUMQ6P988 496 aa15.15■□□□□ 0.02
SNRPA1-204ENST00000558020 DIS3L2Q8IYB7 885 aaKnown RBP15.15■□□□□ 0.02
SNRPA1-204ENST00000558020 TNFRSF25Q93038 417 aa15.15■□□□□ 0.02
SNRPA1-204ENST00000558020 TMEM175Q9BSA9 504 aa15.15■□□□□ 0.02
SNRPA1-204ENST00000558020 EMILIN2Q9BXX0 1053 aa15.15■□□□□ 0.02
SNRPA1-204ENST00000558020 ZBP1Q9H171 429 aa15.15■□□□□ 0.02
SNRPA1-204ENST00000558020 MINDY3Q9H8M7 445 aa15.15■□□□□ 0.02
SNRPA1-204ENST00000558020 TSHZ2Q9NRE2 1034 aa15.15■□□□□ 0.02
SNRPA1-204ENST00000558020 BMP2KQ9NSY1 1161 aaPredicted RBP15.15■□□□□ 0.02
SNRPA1-204ENST00000558020 SSX2IPQ9Y2D8 614 aa15.15■□□□□ 0.02
SNRPA1-204ENST00000558020 MUC6Q6W4X9 2439 aa15.15■□□□□ 0.02
SNRPA1-204ENST00000558020 SPDYE4A6NLX3 237 aa15.14■□□□□ 0.01
SNRPA1-204ENST00000558020 INO80B-WBP1J3KQ70 363 aa15.14■□□□□ 0.01
SNRPA1-204ENST00000558020 ZBTB39O15060 712 aa15.14■□□□□ 0.01
SNRPA1-204ENST00000558020 NCLP19338 710 aaKnown RBP15.14■□□□□ 0.01
SNRPA1-204ENST00000558020 PTENP60484 403 aa15.14■□□□□ 0.01
SNRPA1-204ENST00000558020 SIGLEC14Q08ET2 396 aa15.14■□□□□ 0.01
SNRPA1-204ENST00000558020 ELMSAN1Q6PJG2 1045 aa15.14■□□□□ 0.01
SNRPA1-204ENST00000558020 AGMOQ6ZNB7 445 aa15.14■□□□□ 0.01
SNRPA1-204ENST00000558020 CABP7Q86V35 215 aa15.14■□□□□ 0.01
SNRPA1-204ENST00000558020 ZNF280BQ86YH2 543 aa15.14■□□□□ 0.01
SNRPA1-204ENST00000558020 NSUN7Q8NE18 718 aaKnown RBP15.14■□□□□ 0.01
SNRPA1-204ENST00000558020 TRIM6Q9C030 488 aaPredicted RBP15.14■□□□□ 0.01
SNRPA1-204ENST00000558020 DNAJB4Q9UDY4 337 aa15.14■□□□□ 0.01
SNRPA1-204ENST00000558020 DPP7Q9UHL4 492 aa15.14■□□□□ 0.01
SNRPA1-204ENST00000558020 FAM205CA6NFA0 338 aa15.13■□□□□ 0.01
SNRPA1-204ENST00000558020 MEIS3P2A8K0S8 358 aa15.13■□□□□ 0.01
SNRPA1-204ENST00000558020 DTNBO60941 627 aa15.13■□□□□ 0.01
SNRPA1-204ENST00000558020 KLRC2P26717 231 aa15.13■□□□□ 0.01
SNRPA1-204ENST00000558020 SLC11A1P49279 550 aa15.13■□□□□ 0.01
SNRPA1-204ENST00000558020 PTPN21Q16825 1174 aa15.13■□□□□ 0.01
SNRPA1-204ENST00000558020 IFNLR1Q8IU57 520 aaPredicted RBP15.13■□□□□ 0.01
SNRPA1-204ENST00000558020 PLCD3Q8N3E9 789 aa15.13■□□□□ 0.01
SNRPA1-204ENST00000558020 MRPL17Q9NRX2 175 aaKnown RBP15.13■□□□□ 0.01
SNRPA1-204ENST00000558020 POMCP01189 267 aa15.12■□□□□ 0.01
SNRPA1-204ENST00000558020 ARL2P36404 184 aa15.12■□□□□ 0.01
SNRPA1-204ENST00000558020 UBXN11Q5T124 520 aa15.12■□□□□ 0.01
SNRPA1-204ENST00000558020 RARS2Q5T160 578 aaKnown RBP15.12■□□□□ 0.01
SNRPA1-204ENST00000558020 TMEM173Q86WV6 379 aaPredicted RBP15.12■□□□□ 0.01
SNRPA1-204ENST00000558020 UBALD2Q8IYN6 164 aa15.12■□□□□ 0.01
SNRPA1-204ENST00000558020 FBXL6Q8N531 539 aa15.12■□□□□ 0.01
SNRPA1-204ENST00000558020 ERMNQ8TAM6 284 aa15.12■□□□□ 0.01
SNRPA1-204ENST00000558020 AUTS2Q8WXX7 1259 aa15.12■□□□□ 0.01
SNRPA1-204ENST00000558020 FBXL18Q96ME1 805 aa15.12■□□□□ 0.01
SNRPA1-204ENST00000558020 MTMR9Q96QG7 549 aa15.12■□□□□ 0.01
SNRPA1-204ENST00000558020 NFKBIZQ9BYH8 718 aa15.12■□□□□ 0.01
SNRPA1-204ENST00000558020 CSRNP2Q9H175 543 aa15.12■□□□□ 0.01
SNRPA1-204ENST00000558020 DBR1Q9UK59 544 aaKnown RBP15.12■□□□□ 0.01
SNRPA1-204ENST00000558020 LIMCH1Q9UPQ0 1083 aa15.12■□□□□ 0.01
SNRPA1-204ENST00000558020 ARL5CA6NH57 179 aa15.11■□□□□ 0.01
SNRPA1-204ENST00000558020 NRP1O14786 923 aa15.11■□□□□ 0.01
SNRPA1-204ENST00000558020 TSPAN1O60635 241 aa15.11■□□□□ 0.01
SNRPA1-204ENST00000558020 DDHD2O94830 711 aa15.11■□□□□ 0.01
SNRPA1-204ENST00000558020 ATP2B1P20020 1258 aa15.11■□□□□ 0.01
SNRPA1-204ENST00000558020 RARRES1P49788 294 aa15.11■□□□□ 0.01
SNRPA1-204ENST00000558020 MCPH1Q8NEM0 835 aa15.11■□□□□ 0.01
SNRPA1-204ENST00000558020 SLC22A17Q8WUG5 538 aa15.11■□□□□ 0.01
SNRPA1-204ENST00000558020 NACC1Q96RE7 527 aa15.11■□□□□ 0.01
SNRPA1-204ENST00000558020 LLPHQ9BRT6 129 aaKnown RBP15.11■□□□□ 0.01
SNRPA1-204ENST00000558020 COLEC11Q9BWP8 271 aa15.11■□□□□ 0.01
SNRPA1-204ENST00000558020 TUFT1Q9NNX1 390 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms