RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-208ENST00000557702 KCNH7Q9NS40 1196 aa10.69□□□□□ -0.7
PABPN1-208ENST00000557702 NDRG2Q9UN36 371 aaKnown RBP10.69□□□□□ -0.7
PABPN1-208ENST00000557702 WASF3Q9UPY6 502 aa10.69□□□□□ -0.7
PABPN1-208ENST00000557702 MAST4O15021 2626 aa10.69□□□□□ -0.7
PABPN1-208ENST00000557702 DSPP15924 2871 aaKnown RBP10.68□□□□□ -0.7
PABPN1-208ENST00000557702 DMXL2Q8TDJ6 3036 aa10.68□□□□□ -0.7
PABPN1-208ENST00000557702 IGKV6D-21A0A0A0MT36 114 aa10.68□□□□□ -0.7
PABPN1-208ENST00000557702 A0A0D9SFI3 127 aa10.68□□□□□ -0.7
PABPN1-208ENST00000557702 CHURC1-FNTBB4DL54 471 aa10.68□□□□□ -0.7
PABPN1-208ENST00000557702 MAN2B1O00754 1011 aa10.68□□□□□ -0.7
PABPN1-208ENST00000557702 AXIN1O15169 862 aa10.68□□□□□ -0.7
PABPN1-208ENST00000557702 MAGEB2O15479 319 aa10.68□□□□□ -0.7
PABPN1-208ENST00000557702 TGM5O43548 720 aa10.68□□□□□ -0.7
PABPN1-208ENST00000557702 DARSP14868 501 aaKnown RBP10.68□□□□□ -0.7
PABPN1-208ENST00000557702 FGFR4P22455 802 aa10.68□□□□□ -0.7
PABPN1-208ENST00000557702 FNTBP49356 437 aa10.68□□□□□ -0.7
PABPN1-208ENST00000557702 GLUD2P49448 558 aa10.68□□□□□ -0.7
PABPN1-208ENST00000557702 ZNF252P-AS1Q0IIN9 211 aa10.68□□□□□ -0.7
PABPN1-208ENST00000557702 GRM4Q14833 912 aa10.68□□□□□ -0.7
PABPN1-208ENST00000557702 GRASPQ7Z6J2 395 aaPredicted RBP10.68□□□□□ -0.7
PABPN1-208ENST00000557702 LONP2Q86WA8 852 aa10.68□□□□□ -0.7
PABPN1-208ENST00000557702 CKAP2LQ8IYA6 745 aa10.68□□□□□ -0.7
PABPN1-208ENST00000557702 URGCPQ8TCY9 931 aa10.68□□□□□ -0.7
PABPN1-208ENST00000557702 SCLT1Q96NL6 688 aa10.68□□□□□ -0.7
PABPN1-208ENST00000557702 FAM193BQ96PV7 902 aaPredicted RBP10.68□□□□□ -0.7
PABPN1-208ENST00000557702 TMEM175Q9BSA9 504 aa10.68□□□□□ -0.7
PABPN1-208ENST00000557702 HERC2P3Q9BVR0 1158 aa10.68□□□□□ -0.7
PABPN1-208ENST00000557702 TRAIPQ9BWF2 469 aa10.68□□□□□ -0.7
PABPN1-208ENST00000557702 ARRDC1-AS1Q9H2J1 176 aa10.68□□□□□ -0.7
PABPN1-208ENST00000557702 RXFP1Q9HBX9 757 aa10.68□□□□□ -0.7
PABPN1-208ENST00000557702 ZNF302Q9NR11 478 aa10.68□□□□□ -0.7
PABPN1-208ENST00000557702 DOCK6Q96HP0 2047 aa10.67□□□□□ -0.7
PABPN1-208ENST00000557702 EIF4E1BA6NMX2 242 aaKnown RBP10.67□□□□□ -0.7
PABPN1-208ENST00000557702 NRP1O14786 923 aa10.67□□□□□ -0.7
PABPN1-208ENST00000557702 ZMYND10O75800 440 aa10.67□□□□□ -0.7
PABPN1-208ENST00000557702 DDHD2O94830 711 aa10.67□□□□□ -0.7
PABPN1-208ENST00000557702 CLCN3P51790 818 aa10.67□□□□□ -0.7
PABPN1-208ENST00000557702 SATB1Q01826 763 aa10.67□□□□□ -0.7
PABPN1-208ENST00000557702 CCDC6Q16204 474 aa10.67□□□□□ -0.7
PABPN1-208ENST00000557702 RNF43Q68DV7 783 aa10.67□□□□□ -0.7
PABPN1-208ENST00000557702 TWF2Q6IBS0 349 aaKnown RBP10.67□□□□□ -0.7
PABPN1-208ENST00000557702 EFCAB12Q6NXP0 572 aa10.67□□□□□ -0.7
PABPN1-208ENST00000557702 ABHD15Q6UXT9 468 aa10.67□□□□□ -0.7
PABPN1-208ENST00000557702 TAS1R1Q7RTX1 841 aa10.67□□□□□ -0.7
PABPN1-208ENST00000557702 OTUD7AQ8TE49 926 aaPredicted RBP10.67□□□□□ -0.7
PABPN1-208ENST00000557702 ZNF668Q96K58 619 aaPredicted RBP10.67□□□□□ -0.7
PABPN1-208ENST00000557702 MXRA8Q9BRK3 442 aa10.67□□□□□ -0.7
PABPN1-208ENST00000557702 SCNM1Q9BWG6 230 aa10.67□□□□□ -0.7
PABPN1-208ENST00000557702 KRT23Q9C075 422 aa10.67□□□□□ -0.7
PABPN1-208ENST00000557702 PSTPIP2Q9H939 334 aa10.67□□□□□ -0.7
PABPN1-208ENST00000557702 LMAN1LQ9HAT1 526 aa10.67□□□□□ -0.7
PABPN1-208ENST00000557702 KANSL3Q9P2N6 904 aa10.67□□□□□ -0.7
PABPN1-208ENST00000557702 CEP131Q9UPN4 1083 aa10.67□□□□□ -0.7
PABPN1-208ENST00000557702 NAV2Q8IVL1 2488 aa10.67□□□□□ -0.7
PABPN1-208ENST00000557702 WDFY3Q8IZQ1 3526 aa10.67□□□□□ -0.7
PABPN1-208ENST00000557702 HELZ2Q9BYK8 2649 aaKnown RBP10.67□□□□□ -0.7
PABPN1-208ENST00000557702 SPDYE3A6NKU9 549 aa10.66□□□□□ -0.7
PABPN1-208ENST00000557702 SHISA7A6NL88 538 aa10.66□□□□□ -0.7
PABPN1-208ENST00000557702 GIPC1O14908 333 aa10.66□□□□□ -0.7
PABPN1-208ENST00000557702 B4GALT3O60512 393 aa10.66□□□□□ -0.7
PABPN1-208ENST00000557702 TOP3BO95985 862 aaKnown RBP10.66□□□□□ -0.7
PABPN1-208ENST00000557702 MX1P20591 662 aa10.66□□□□□ -0.7
PABPN1-208ENST00000557702 KIF5BP33176 963 aa10.66□□□□□ -0.7
PABPN1-208ENST00000557702 NTHL1P78549 312 aa10.66□□□□□ -0.7
PABPN1-208ENST00000557702 DSG1Q02413 1049 aa10.66□□□□□ -0.7
PABPN1-208ENST00000557702 SEC23AQ15436 765 aa10.66□□□□□ -0.7
PABPN1-208ENST00000557702 HEATR6Q6AI08 1181 aaKnown RBP10.66□□□□□ -0.7
PABPN1-208ENST00000557702 SWSAP1Q6NVH7 229 aa10.66□□□□□ -0.7
PABPN1-208ENST00000557702 MIS18BP1Q6P0N0 1132 aa10.66□□□□□ -0.7
PABPN1-208ENST00000557702 TRMT1LQ7Z2T5 733 aaKnown RBP10.66□□□□□ -0.7
PABPN1-208ENST00000557702 CCDC60Q8IWA6 550 aaPredicted RBP10.66□□□□□ -0.7
PABPN1-208ENST00000557702 ZNF687Q8N1G0 1237 aa10.66□□□□□ -0.7
PABPN1-208ENST00000557702 NLRP7Q8WX94 980 aa10.66□□□□□ -0.7
PABPN1-208ENST00000557702 PGBD4Q96DM1 585 aa10.66□□□□□ -0.7
PABPN1-208ENST00000557702 LOXL4Q96JB6 756 aa10.66□□□□□ -0.7
PABPN1-208ENST00000557702 LOC400499M0QZD8 3231 aa10.66□□□□□ -0.7
PABPN1-208ENST00000557702 NBEAQ8NFP9 2946 aa10.66□□□□□ -0.7
PABPN1-208ENST00000557702 GREB1Q4ZG55 1949 aa10.66□□□□□ -0.7
PABPN1-208ENST00000557702 MTCL1Q9Y4B5 1905 aaKnown RBP10.65□□□□□ -0.7
PABPN1-208ENST00000557702 MEIS3P2A8K0S8 358 aa10.65□□□□□ -0.7
PABPN1-208ENST00000557702 ECI2O75521 394 aa10.65□□□□□ -0.7
PABPN1-208ENST00000557702 CSDE1O75534 798 aaKnown RBP10.65□□□□□ -0.7
PABPN1-208ENST00000557702 ATP4AP20648 1035 aa10.65□□□□□ -0.7
PABPN1-208ENST00000557702 RAB27AP51159 221 aa10.65□□□□□ -0.7
PABPN1-208ENST00000557702 GPC3P51654 580 aa10.65□□□□□ -0.7
PABPN1-208ENST00000557702 MFAP1P55081 439 aaKnown RBP10.65□□□□□ -0.7
PABPN1-208ENST00000557702 ITGB3BPQ13352 177 aaPredicted RBP10.65□□□□□ -0.7
PABPN1-208ENST00000557702 LILRA6Q6PI73 481 aa10.65□□□□□ -0.7
PABPN1-208ENST00000557702 PDZD3Q86UT5 571 aa10.65□□□□□ -0.7
PABPN1-208ENST00000557702 TICAM2Q86XR7 235 aa10.65□□□□□ -0.7
PABPN1-208ENST00000557702 SPEM1Q8N4L4 309 aa10.65□□□□□ -0.7
PABPN1-208ENST00000557702 FAM3CQ92520 227 aa10.65□□□□□ -0.7
PABPN1-208ENST00000557702 DNASE1L2Q92874 299 aa10.65□□□□□ -0.7
PABPN1-208ENST00000557702 RRP36Q96EU6 259 aaKnown RBP10.65□□□□□ -0.7
PABPN1-208ENST00000557702 CNNM2Q9H8M5 875 aa10.65□□□□□ -0.7
PABPN1-208ENST00000557702 AGO4Q9HCK5 861 aaKnown RBP10.65□□□□□ -0.7
PABPN1-208ENST00000557702 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.65□□□□□ -0.73e-8■□□□□ 9
PABPN1-208ENST00000557702 FAM105AQ9NUU6 356 aa10.65□□□□□ -0.7
PABPN1-208ENST00000557702 SEC63Q9UGP8 760 aaKnown RBP10.65□□□□□ -0.7
PABPN1-208ENST00000557702 PCDHA6Q9UN73 950 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms