RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 ITGB1P05556 798 aa4.15□□□□□ -1.75
GPHN-216ENST00000557678 GAAP10253 952 aa4.15□□□□□ -1.75
GPHN-216ENST00000557678 DUSP2Q05923 314 aa4.15□□□□□ -1.75
GPHN-216ENST00000557678 CD69Q07108 199 aa4.15□□□□□ -1.75
GPHN-216ENST00000557678 DCAF17Q5H9S7 520 aaPredicted RBP4.15□□□□□ -1.75
GPHN-216ENST00000557678 C1QL3Q5VWW1 255 aa4.15□□□□□ -1.75
GPHN-216ENST00000557678 LMBR1LQ6UX01 489 aa4.15□□□□□ -1.75
GPHN-216ENST00000557678 FAM83AQ86UY5 434 aa4.15□□□□□ -1.75
GPHN-216ENST00000557678 EFHBQ8N7U6 833 aa4.15□□□□□ -1.75
GPHN-216ENST00000557678 CDYL2Q8N8U2 506 aa4.15□□□□□ -1.75
GPHN-216ENST00000557678 GLB1L3Q8NCI6 653 aaPredicted RBP4.15□□□□□ -1.75
GPHN-216ENST00000557678 PIK3C3Q8NEB9 887 aa4.15□□□□□ -1.75
GPHN-216ENST00000557678 LENG9Q96B70 501 aa4.15□□□□□ -1.75
GPHN-216ENST00000557678 IL17RAQ96F46 866 aa4.15□□□□□ -1.75
GPHN-216ENST00000557678 GPR101Q96P66 508 aaPredicted RBP4.15□□□□□ -1.75
GPHN-216ENST00000557678 ZMAT4Q9H898 229 aa4.15□□□□□ -1.75
GPHN-216ENST00000557678 CYP4F11Q9HBI6 524 aa4.15□□□□□ -1.75
GPHN-216ENST00000557678 SPON1Q9HCB6 807 aa4.15□□□□□ -1.75
GPHN-216ENST00000557678 TRPM5Q9NZQ8 1165 aa4.15□□□□□ -1.75
GPHN-216ENST00000557678 ZNHIT2Q9UHR6 403 aa4.15□□□□□ -1.75
GPHN-216ENST00000557678 FZD1Q9UP38 647 aa4.15□□□□□ -1.75
GPHN-216ENST00000557678 PCSK5Q92824 1860 aa4.14□□□□□ -1.75
GPHN-216ENST00000557678 PRR5-ARHGAP8B1AHC4 643 aa4.14□□□□□ -1.75
GPHN-216ENST00000557678 ELL2O00472 640 aaPredicted RBP4.14□□□□□ -1.75
GPHN-216ENST00000557678 NRP2O60462 931 aa4.14□□□□□ -1.75
GPHN-216ENST00000557678 RAB11FIP3O75154 756 aa4.14□□□□□ -1.75
GPHN-216ENST00000557678 RHOBTB3O94955 611 aa4.14□□□□□ -1.75
GPHN-216ENST00000557678 HSP90B1P14625 803 aaKnown RBP4.14□□□□□ -1.75
GPHN-216ENST00000557678 LAG3P18627 525 aa4.14□□□□□ -1.75
GPHN-216ENST00000557678 NRG3P56975 720 aa4.14□□□□□ -1.75
GPHN-216ENST00000557678 MGAT5Q09328 741 aa4.14□□□□□ -1.75
GPHN-216ENST00000557678 TCEA2Q15560 299 aa4.14□□□□□ -1.75
GPHN-216ENST00000557678 CREB3L3Q68CJ9 461 aa4.14□□□□□ -1.75
GPHN-216ENST00000557678 Q6ZPA2 131 aa4.14□□□□□ -1.75
GPHN-216ENST00000557678 LRRC55Q6ZSA7 311 aa4.14□□□□□ -1.75
GPHN-216ENST00000557678 XYLT1Q86Y38 959 aa4.14□□□□□ -1.75
GPHN-216ENST00000557678 UNC5BQ8IZJ1 945 aa4.14□□□□□ -1.75
GPHN-216ENST00000557678 GPR150Q8NGU9 434 aa4.14□□□□□ -1.75
GPHN-216ENST00000557678 GAB3Q8WWW8 586 aa4.14□□□□□ -1.75
GPHN-216ENST00000557678 RIOX1Q9H6W3 641 aa4.14□□□□□ -1.75
GPHN-216ENST00000557678 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.14□□□□□ -1.75
GPHN-216ENST00000557678 INTS7Q9NVH2 962 aaKnown RBP4.14□□□□□ -1.75
GPHN-216ENST00000557678 CD2APQ9Y5K6 639 aa4.14□□□□□ -1.75
GPHN-216ENST00000557678 TRIM24O15164 1050 aa4.13□□□□□ -1.75
GPHN-216ENST00000557678 PRAMEF4O60810 478 aa4.13□□□□□ -1.75
GPHN-216ENST00000557678 RFPL3O75679 317 aa4.13□□□□□ -1.75
GPHN-216ENST00000557678 LY86O95711 162 aa4.13□□□□□ -1.75
GPHN-216ENST00000557678 F2P00734 622 aa4.13□□□□□ -1.75
GPHN-216ENST00000557678 CFBP00751 764 aa4.13□□□□□ -1.75
GPHN-216ENST00000557678 GZMKP49863 264 aa4.13□□□□□ -1.75
GPHN-216ENST00000557678 SCNN1BP51168 640 aa4.13□□□□□ -1.75
GPHN-216ENST00000557678 IL2P60568 153 aa4.13□□□□□ -1.75
GPHN-216ENST00000557678 PPARAQ07869 468 aa4.13□□□□□ -1.75
GPHN-216ENST00000557678 CCDC144BQ3MJ40 725 aa4.13□□□□□ -1.75
GPHN-216ENST00000557678 PLEKHG4Q58EX7 1191 aa4.13□□□□□ -1.75
GPHN-216ENST00000557678 HTR3DQ70Z44 454 aa4.13□□□□□ -1.75
GPHN-216ENST00000557678 LRRTM3Q86VH5 581 aa4.13□□□□□ -1.75
GPHN-216ENST00000557678 CXorf67Q86X51 503 aaPredicted RBP4.13□□□□□ -1.75
GPHN-216ENST00000557678 HOMER1Q86YM7 354 aa4.13□□□□□ -1.75
GPHN-216ENST00000557678 ZNF496Q96IT1 587 aaPredicted RBP4.13□□□□□ -1.75
GPHN-216ENST00000557678 ANO3Q9BYT9 981 aa4.13□□□□□ -1.75
GPHN-216ENST00000557678 ZNF768Q9H5H4 540 aaKnown RBP4.13□□□□□ -1.75
GPHN-216ENST00000557678 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.13□□□□□ -1.75
GPHN-216ENST00000557678 TMEM260Q9NX78 707 aa4.13□□□□□ -1.75
GPHN-216ENST00000557678 KCNG1Q9UIX4 513 aa4.13□□□□□ -1.75
GPHN-216ENST00000557678 PACSIN3Q9UKS6 424 aa4.13□□□□□ -1.75
GPHN-216ENST00000557678 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.13□□□□□ -1.75
GPHN-216ENST00000557678 LCHNA4D1U4 455 aa4.12□□□□□ -1.75
GPHN-216ENST00000557678 B3GALT2O43825 422 aa4.12□□□□□ -1.75
GPHN-216ENST00000557678 NR4A1P22736 598 aa4.12□□□□□ -1.75
GPHN-216ENST00000557678 APOBEC3AP31941 199 aaPredicted RBP4.12□□□□□ -1.75
GPHN-216ENST00000557678 OCRLQ01968 901 aa4.12□□□□□ -1.75
GPHN-216ENST00000557678 MRPL49Q13405 166 aaKnown RBP4.12□□□□□ -1.75
GPHN-216ENST00000557678 LRRC32Q14392 662 aa4.12□□□□□ -1.75
GPHN-216ENST00000557678 VPS72Q15906 364 aa4.12□□□□□ -1.75
GPHN-216ENST00000557678 ZBTB41Q5SVQ8 909 aa4.12□□□□□ -1.75
GPHN-216ENST00000557678 NAIF1Q69YI7 327 aaPredicted RBP4.12□□□□□ -1.75
GPHN-216ENST00000557678 PCSK4Q6UW60 755 aa4.12□□□□□ -1.75
GPHN-216ENST00000557678 C11orf74Q86VG3 221 aa4.12□□□□□ -1.75
GPHN-216ENST00000557678 KIF18BQ86Y91 864 aa4.12□□□□□ -1.75
GPHN-216ENST00000557678 SYNPOQ8N3V7 929 aa4.12□□□□□ -1.75
GPHN-216ENST00000557678 LCORLQ8N3X6 602 aa4.12□□□□□ -1.75
GPHN-216ENST00000557678 SUPT20HQ8NEM7 779 aa4.12□□□□□ -1.75
GPHN-216ENST00000557678 CDC5LQ99459 802 aaKnown RBP4.12□□□□□ -1.75
GPHN-216ENST00000557678 NDC1Q9BTX1 674 aa4.12□□□□□ -1.75
GPHN-216ENST00000557678 CPEB1Q9BZB8 566 aaKnown RBP4.12□□□□□ -1.75
GPHN-216ENST00000557678 KCNH6Q9H252 994 aa4.12□□□□□ -1.75
GPHN-216ENST00000557678 POGKQ9P215 609 aa4.12□□□□□ -1.75
GPHN-216ENST00000557678 USP36Q9P275 1121 aaKnown RBP4.12□□□□□ -1.75
GPHN-216ENST00000557678 ANKFY1Q9P2R3 1169 aa4.12□□□□□ -1.75
GPHN-216ENST00000557678 PRSS38A1L453 326 aa4.11□□□□□ -1.75
GPHN-216ENST00000557678 GRXCR1A8MXD5 290 aa4.11□□□□□ -1.75
GPHN-216ENST00000557678 LPXNO60711 386 aa4.11□□□□□ -1.75
GPHN-216ENST00000557678 NDUFA10O95299 355 aa4.11□□□□□ -1.75
GPHN-216ENST00000557678 LSP1P33241 339 aa4.11□□□□□ -1.75
GPHN-216ENST00000557678 PTTG1IPP53801 180 aa4.11□□□□□ -1.75
GPHN-216ENST00000557678 USP14P54578 494 aa4.11□□□□□ -1.75
GPHN-216ENST00000557678 WNT3AP56704 352 aa4.11□□□□□ -1.75
GPHN-216ENST00000557678 RNASE9P60153 205 aaKnown RBP4.11□□□□□ -1.75
GPHN-216ENST00000557678 APBA1Q02410 837 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms