RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 PCDHB6Q9Y5E3 794 aa3.89□□□□□ -1.79
FOXN3-216ENST00000557496 AHRRA9YTQ3 701 aa3.88□□□□□ -1.79
FOXN3-216ENST00000557496 PPP1R12AO14974 1030 aaPredicted RBP3.88□□□□□ -1.79
FOXN3-216ENST00000557496 B3GALT2O43825 422 aa3.88□□□□□ -1.79
FOXN3-216ENST00000557496 DNAJC6O75061 913 aa3.88□□□□□ -1.79
FOXN3-216ENST00000557496 SEC24DO94855 1032 aaPredicted RBP3.88□□□□□ -1.79
FOXN3-216ENST00000557496 SCAF4O95104 1147 aaKnown RBP3.88□□□□□ -1.79
FOXN3-216ENST00000557496 LY86O95711 162 aa3.88□□□□□ -1.79
FOXN3-216ENST00000557496 PFKMP08237 780 aa3.88□□□□□ -1.79
FOXN3-216ENST00000557496 GYPEP15421 78 aa3.88□□□□□ -1.79
FOXN3-216ENST00000557496 CD40P25942 277 aa3.88□□□□□ -1.79
FOXN3-216ENST00000557496 CASRP41180 1078 aa3.88□□□□□ -1.79
FOXN3-216ENST00000557496 PTTG1IPP53801 180 aa3.88□□□□□ -1.79
FOXN3-216ENST00000557496 WNT3AP56704 352 aa3.88□□□□□ -1.79
FOXN3-216ENST00000557496 CD69Q07108 199 aa3.88□□□□□ -1.79
FOXN3-216ENST00000557496 PABPC4Q13310 644 aaKnown RBP eCLIP3.88□□□□□ -1.79
FOXN3-216ENST00000557496 LRRC32Q14392 662 aa3.88□□□□□ -1.79
FOXN3-216ENST00000557496 VPS72Q15906 364 aa3.88□□□□□ -1.79
FOXN3-216ENST00000557496 NFE2L2Q16236 605 aa3.88□□□□□ -1.79
FOXN3-216ENST00000557496 CFAP100Q494V2 611 aa3.88□□□□□ -1.79
FOXN3-216ENST00000557496 ZBTB41Q5SVQ8 909 aa3.88□□□□□ -1.79
FOXN3-216ENST00000557496 DOK3Q7L591 496 aa3.88□□□□□ -1.79
FOXN3-216ENST00000557496 EFHBQ8N7U6 833 aa3.88□□□□□ -1.79
FOXN3-216ENST00000557496 CDYL2Q8N8U2 506 aa3.88□□□□□ -1.79
FOXN3-216ENST00000557496 GLB1L3Q8NCI6 653 aaPredicted RBP3.88□□□□□ -1.79
FOXN3-216ENST00000557496 SH3TC2Q8TF17 1288 aa3.88□□□□□ -1.79
FOXN3-216ENST00000557496 DNAJC2Q99543 621 aaKnown RBP3.88□□□□□ -1.79
FOXN3-216ENST00000557496 FDXACB1Q9BRP7 624 aaPredicted RBP3.88□□□□□ -1.79
FOXN3-216ENST00000557496 LSM14BQ9BX40 385 aaKnown RBP3.88□□□□□ -1.79
FOXN3-216ENST00000557496 SLC46A2Q9BY10 475 aa3.88□□□□□ -1.79
FOXN3-216ENST00000557496 KCNH6Q9H252 994 aa3.88□□□□□ -1.79
FOXN3-216ENST00000557496 TOR3AQ9H497 397 aa3.88□□□□□ -1.79
FOXN3-216ENST00000557496 INTS7Q9NVH2 962 aaKnown RBP3.88□□□□□ -1.79
FOXN3-216ENST00000557496 TMEM260Q9NX78 707 aa3.88□□□□□ -1.79
FOXN3-216ENST00000557496 PODXL2Q9NZ53 605 aa3.88□□□□□ -1.79
FOXN3-216ENST00000557496 MAGEC2Q9UBF1 373 aaPredicted RBP3.88□□□□□ -1.79
FOXN3-216ENST00000557496 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.88□□□□□ -1.79
FOXN3-216ENST00000557496 MYPNQ86TC9 1320 aa3.88□□□□□ -1.79
FOXN3-216ENST00000557496 CENPVL1A0A0U1RR11 272 aa3.87□□□□□ -1.79
FOXN3-216ENST00000557496 FAM83GA6ND36 823 aa3.87□□□□□ -1.79
FOXN3-216ENST00000557496 NUDT3O95989 172 aa3.87□□□□□ -1.79
FOXN3-216ENST00000557496 F2P00734 622 aa3.87□□□□□ -1.79
FOXN3-216ENST00000557496 LAG3P18627 525 aa3.87□□□□□ -1.79
FOXN3-216ENST00000557496 FAM189BP81408 668 aa3.87□□□□□ -1.79
FOXN3-216ENST00000557496 DSG1Q02413 1049 aa3.87□□□□□ -1.79
FOXN3-216ENST00000557496 MRPL49Q13405 166 aaKnown RBP3.87□□□□□ -1.79
FOXN3-216ENST00000557496 BMS1Q14692 1282 aaKnown RBP3.87□□□□□ -1.79
FOXN3-216ENST00000557496 TIGD2Q4W5G0 525 aa3.87□□□□□ -1.79
FOXN3-216ENST00000557496 HECTD2Q5U5R9 776 aa3.87□□□□□ -1.79
FOXN3-216ENST00000557496 IQSEC1Q6DN90 963 aa3.87□□□□□ -1.79
FOXN3-216ENST00000557496 FAM83AQ86UY5 434 aa3.87□□□□□ -1.79
FOXN3-216ENST00000557496 LILRA3Q8N6C8 439 aaPredicted RBP3.87□□□□□ -1.79
FOXN3-216ENST00000557496 BEND2Q8NDZ0 799 aa3.87□□□□□ -1.79
FOXN3-216ENST00000557496 OR5M3Q8NGP4 307 aa3.87□□□□□ -1.79
FOXN3-216ENST00000557496 MYEOVQ96EZ4 313 aa3.87□□□□□ -1.79
FOXN3-216ENST00000557496 IL17RAQ96F46 866 aa3.87□□□□□ -1.79
FOXN3-216ENST00000557496 NDC1Q9BTX1 674 aa3.87□□□□□ -1.79
FOXN3-216ENST00000557496 USP36Q9P275 1121 aaKnown RBP3.87□□□□□ -1.79
FOXN3-216ENST00000557496 EIF2B4Q9UI10 523 aaKnown RBP3.87□□□□□ -1.79
FOXN3-216ENST00000557496 ZKSCAN5Q9Y2L8 839 aa3.87□□□□□ -1.79
FOXN3-216ENST00000557496 COL4A3Q01955 1670 aa3.87□□□□□ -1.79
FOXN3-216ENST00000557496 ST20-MTHFSA0A0A6YYL1 179 aa3.86□□□□□ -1.79
FOXN3-216ENST00000557496 ZNF891A8MT65 544 aaPredicted RBP3.86□□□□□ -1.79
FOXN3-216ENST00000557496 TGM5O43548 720 aa3.86□□□□□ -1.79
FOXN3-216ENST00000557496 GAS7O60861 476 aa3.86□□□□□ -1.79
FOXN3-216ENST00000557496 ASMTLO95671 621 aa3.86□□□□□ -1.79
FOXN3-216ENST00000557496 POU3F2P20265 443 aaPredicted RBP3.86□□□□□ -1.79
FOXN3-216ENST00000557496 APOBEC3AP31941 199 aaPredicted RBP3.86□□□□□ -1.79
FOXN3-216ENST00000557496 GZMKP49863 264 aa3.86□□□□□ -1.79
FOXN3-216ENST00000557496 GPR158Q5T848 1215 aa3.86□□□□□ -1.79
FOXN3-216ENST00000557496 Q6YL49 198 aa3.86□□□□□ -1.79
FOXN3-216ENST00000557496 KIF18BQ86Y91 864 aa3.86□□□□□ -1.79
FOXN3-216ENST00000557496 MSL3Q8N5Y2 521 aaKnown RBP3.86□□□□□ -1.79
FOXN3-216ENST00000557496 NTN5Q8WTR8 489 aaPredicted RBP3.86□□□□□ -1.79
FOXN3-216ENST00000557496 CHTF18Q8WVB6 975 aa3.86□□□□□ -1.79
FOXN3-216ENST00000557496 ZNF764Q96H86 408 aaPredicted RBP3.86□□□□□ -1.79
FOXN3-216ENST00000557496 ZNF496Q96IT1 587 aaPredicted RBP3.86□□□□□ -1.79
FOXN3-216ENST00000557496 FAM193BQ96PV7 902 aaPredicted RBP3.86□□□□□ -1.79
FOXN3-216ENST00000557496 EPC1Q9H2F5 836 aa3.86□□□□□ -1.79
FOXN3-216ENST00000557496 RIOX1Q9H6W3 641 aa3.86□□□□□ -1.79
FOXN3-216ENST00000557496 CHST2Q9Y4C5 530 aa3.86□□□□□ -1.79
FOXN3-216ENST00000557496 A0A1W2PR48 441 aa3.85□□□□□ -1.79
FOXN3-216ENST00000557496 TMEM200CA6NKL6 621 aa3.85□□□□□ -1.79
FOXN3-216ENST00000557496 ZAR1LA6NP61 321 aa3.85□□□□□ -1.79
FOXN3-216ENST00000557496 KPNA6O60684 536 aa3.85□□□□□ -1.79
FOXN3-216ENST00000557496 LPXNO60711 386 aa3.85□□□□□ -1.79
FOXN3-216ENST00000557496 ZEB1P37275 1124 aaPredicted RBP3.85□□□□□ -1.79
FOXN3-216ENST00000557496 GPR15P49685 360 aa3.85□□□□□ -1.79
FOXN3-216ENST00000557496 TAP1Q03518 808 aa3.85□□□□□ -1.79
FOXN3-216ENST00000557496 DUSP2Q05923 314 aa3.85□□□□□ -1.79
FOXN3-216ENST00000557496 HNRNPA0Q13151 305 aaKnown RBP3.85□□□□□ -1.79
FOXN3-216ENST00000557496 CCDC142Q17RM4 750 aa3.85□□□□□ -1.79
FOXN3-216ENST00000557496 CCDC178Q5BJE1 867 aa3.85□□□□□ -1.79
FOXN3-216ENST00000557496 OLFML1Q6UWY5 402 aa3.85□□□□□ -1.79
FOXN3-216ENST00000557496 ESPNLQ6ZVH7 1005 aa3.85□□□□□ -1.79
FOXN3-216ENST00000557496 TAS1R1Q7RTX1 841 aa3.85□□□□□ -1.79
FOXN3-216ENST00000557496 GPRIN1Q7Z2K8 1008 aa3.85□□□□□ -1.79
FOXN3-216ENST00000557496 GDF7Q7Z4P5 450 aa3.85□□□□□ -1.79
FOXN3-216ENST00000557496 NXPE1Q8N323 547 aa3.85□□□□□ -1.79
FOXN3-216ENST00000557496 SYNPOQ8N3V7 929 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms