RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 SRPRBQ9Y5M8 271 aaKnown RBP17.55■□□□□ 0.4
TUBB3-214ENST00000557490 TRIOO75962 3097 aa17.54■□□□□ 0.4
TUBB3-214ENST00000557490 TSPAN1O60635 241 aa17.54■□□□□ 0.4
TUBB3-214ENST00000557490 F13A1P00488 732 aa17.54■□□□□ 0.4
TUBB3-214ENST00000557490 PLA2G4BP0C869 781 aa17.54■□□□□ 0.4
TUBB3-214ENST00000557490 HOXA11P31270 313 aaPredicted RBP17.54■□□□□ 0.4
TUBB3-214ENST00000557490 NAMPTP43490 491 aa17.54■□□□□ 0.4
TUBB3-214ENST00000557490 GPM6BQ13491 265 aa17.54■□□□□ 0.4
TUBB3-214ENST00000557490 SLC39A14Q15043 492 aa17.54■□□□□ 0.4
TUBB3-214ENST00000557490 STK38Q15208 465 aa17.54■□□□□ 0.4
TUBB3-214ENST00000557490 CSPP1Q1MSJ5 1256 aa17.54■□□□□ 0.4
TUBB3-214ENST00000557490 RINT1Q6NUQ1 792 aa17.54■□□□□ 0.4
TUBB3-214ENST00000557490 NOTUMQ6P988 496 aa17.54■□□□□ 0.4
TUBB3-214ENST00000557490 ZNF598Q86UK7 904 aaKnown RBP17.54■□□□□ 0.4
TUBB3-214ENST00000557490 GJD3Q8N144 294 aa17.54■□□□□ 0.4
TUBB3-214ENST00000557490 SYT2Q8N9I0 419 aaPredicted RBP17.54■□□□□ 0.4
TUBB3-214ENST00000557490 BSNDQ8WZ55 320 aa17.54■□□□□ 0.4
TUBB3-214ENST00000557490 PGBD4Q96DM1 585 aa17.54■□□□□ 0.4
TUBB3-214ENST00000557490 CCDC51Q96ER9 411 aa17.54■□□□□ 0.4
TUBB3-214ENST00000557490 C11orf84Q9BUA3 381 aaPredicted RBP17.54■□□□□ 0.4
TUBB3-214ENST00000557490 RUSC1Q9BVN2 902 aa17.54■□□□□ 0.4
TUBB3-214ENST00000557490 TIPINQ9BVW5 301 aa17.54■□□□□ 0.4
TUBB3-214ENST00000557490 PLVAPQ9BX97 442 aa17.54■□□□□ 0.4
TUBB3-214ENST00000557490 CSRNP2Q9H175 543 aa17.54■□□□□ 0.4
TUBB3-214ENST00000557490 LMCD1Q9NZU5 365 aa17.54■□□□□ 0.4
TUBB3-214ENST00000557490 PCDHB2Q9Y5E7 798 aa17.54■□□□□ 0.4
TUBB3-214ENST00000557490 MORC2Q9Y6X9 1032 aaPredicted RBP17.54■□□□□ 0.4
TUBB3-214ENST00000557490 C5orf67F2Z3F1 127 aa17.53■□□□□ 0.4
TUBB3-214ENST00000557490 H3BNC9 293 aa17.53■□□□□ 0.4
TUBB3-214ENST00000557490 LPXNO60711 386 aa17.53■□□□□ 0.4
TUBB3-214ENST00000557490 ZNF623O75123 536 aa17.53■□□□□ 0.4
TUBB3-214ENST00000557490 HIP1RO75146 1068 aa17.53■□□□□ 0.4
TUBB3-214ENST00000557490 TXLNAP40222 546 aa17.53■□□□□ 0.4
TUBB3-214ENST00000557490 NASPP49321 788 aaPredicted RBP17.53■□□□□ 0.4
TUBB3-214ENST00000557490 KARSQ15046 597 aaKnown RBP17.53■□□□□ 0.4
TUBB3-214ENST00000557490 PTPROQ16827 1216 aa17.53■□□□□ 0.4
TUBB3-214ENST00000557490 CDCA2Q69YH5 1023 aaPredicted RBP17.53■□□□□ 0.4
TUBB3-214ENST00000557490 C1orf186Q6ZWK4 172 aa17.53■□□□□ 0.4
TUBB3-214ENST00000557490 KRI1Q8N9T8 703 aaKnown RBP17.53■□□□□ 0.4
TUBB3-214ENST00000557490 DRC1Q96MC2 740 aa17.53■□□□□ 0.4
TUBB3-214ENST00000557490 CASD1Q96PB1 797 aa17.53■□□□□ 0.4
TUBB3-214ENST00000557490 CCSER1Q9C0I3 900 aa17.53■□□□□ 0.4
TUBB3-214ENST00000557490 POLD4Q9HCU8 107 aa17.53■□□□□ 0.4
TUBB3-214ENST00000557490 AAASQ9NRG9 546 aa17.53■□□□□ 0.4
TUBB3-214ENST00000557490 RNF19AQ9NV58 838 aa17.53■□□□□ 0.4
TUBB3-214ENST00000557490 PRMT7Q9NVM4 692 aaPredicted RBP17.53■□□□□ 0.4
TUBB3-214ENST00000557490 KCND2Q9NZV8 630 aa17.53■□□□□ 0.4
TUBB3-214ENST00000557490 CCDC39Q9UFE4 941 aa17.53■□□□□ 0.4
TUBB3-214ENST00000557490 LINC00271P0C7V0 271 aa17.52■□□□□ 0.4
TUBB3-214ENST00000557490 ALADP13716 330 aa17.52■□□□□ 0.4
TUBB3-214ENST00000557490 ATF7P17544 494 aaPredicted RBP17.52■□□□□ 0.4
TUBB3-214ENST00000557490 PLCG1P19174 1290 aa17.52■□□□□ 0.4
TUBB3-214ENST00000557490 GUCY2CP25092 1073 aa17.52■□□□□ 0.4
TUBB3-214ENST00000557490 EFNA5P52803 228 aa17.52■□□□□ 0.4
TUBB3-214ENST00000557490 SLC12A3P55017 1021 aa17.52■□□□□ 0.4
TUBB3-214ENST00000557490 MAPK6Q16659 721 aa17.52■□□□□ 0.4
TUBB3-214ENST00000557490 AMHR2Q16671 573 aa17.52■□□□□ 0.4
TUBB3-214ENST00000557490 TMEM132AQ24JP5 1023 aa17.52■□□□□ 0.4
TUBB3-214ENST00000557490 CLLU1OSQ5K130 101 aa17.52■□□□□ 0.4
TUBB3-214ENST00000557490 SPECC1Q5M775 1068 aa17.52■□□□□ 0.4
TUBB3-214ENST00000557490 GLB1LQ6UWU2 654 aa17.52■□□□□ 0.4
TUBB3-214ENST00000557490 PPP4R3CPQ6ZMV5 832 aa17.52■□□□□ 0.4
TUBB3-214ENST00000557490 FAM178BQ8IXR5 827 aa17.52■□□□□ 0.4
TUBB3-214ENST00000557490 LRRC43Q8N309 656 aa17.52■□□□□ 0.4
TUBB3-214ENST00000557490 CNNM3Q8NE01 707 aa17.52■□□□□ 0.4
TUBB3-214ENST00000557490 RSPH1Q8WYR4 309 aa17.52■□□□□ 0.4
TUBB3-214ENST00000557490 CPB2Q96IY4 423 aa17.52■□□□□ 0.4
TUBB3-214ENST00000557490 PRIMPOLQ96LW4 560 aa17.52■□□□□ 0.4
TUBB3-214ENST00000557490 CLIC6Q96NY7 704 aa17.52■□□□□ 0.4
TUBB3-214ENST00000557490 TYW1Q9NV66 732 aaKnown RBP17.52■□□□□ 0.4
TUBB3-214ENST00000557490 TFIP11Q9UBB9 837 aaKnown RBP17.52■□□□□ 0.4
TUBB3-214ENST00000557490 PCDHB12Q9Y5F1 795 aa17.52■□□□□ 0.4
TUBB3-214ENST00000557490 CCDC169A6NNP5 214 aa17.51■□□□□ 0.39
TUBB3-214ENST00000557490 SPTLC2O15270 562 aa17.51■□□□□ 0.39
TUBB3-214ENST00000557490 ARF4P18085 180 aaPredicted RBP17.51■□□□□ 0.39
TUBB3-214ENST00000557490 LIG1P18858 919 aa17.51■□□□□ 0.39
TUBB3-214ENST00000557490 DMP1Q13316 513 aaPredicted RBP17.51■□□□□ 0.39
TUBB3-214ENST00000557490 FAM187BQ17R55 369 aa17.51■□□□□ 0.39
TUBB3-214ENST00000557490 FOXD4L6Q3SYB3 417 aaPredicted RBP17.51■□□□□ 0.39
TUBB3-214ENST00000557490 LONRF3Q496Y0 759 aa17.51■□□□□ 0.39
TUBB3-214ENST00000557490 NAALADL2Q58DX5 795 aa17.51■□□□□ 0.39
TUBB3-214ENST00000557490 UBXN11Q5T124 520 aa17.51■□□□□ 0.39
TUBB3-214ENST00000557490 FOXD4L3Q6VB84 417 aaPredicted RBP17.51■□□□□ 0.39
TUBB3-214ENST00000557490 LINC00301Q8NCQ3 95 aa17.51■□□□□ 0.39
TUBB3-214ENST00000557490 HELQQ8TDG4 1101 aa17.51■□□□□ 0.39
TUBB3-214ENST00000557490 LPPQ93052 612 aa17.51■□□□□ 0.39
TUBB3-214ENST00000557490 EPSTI1Q96J88 318 aa17.51■□□□□ 0.39
TUBB3-214ENST00000557490 MRPL9Q9BYD2 267 aaKnown RBP17.51■□□□□ 0.39
TUBB3-214ENST00000557490 TRIM6Q9C030 488 aaPredicted RBP17.51■□□□□ 0.39
TUBB3-214ENST00000557490 FZD8Q9H461 694 aa17.51■□□□□ 0.39
TUBB3-214ENST00000557490 C17orf75Q9HAS0 396 aa17.51■□□□□ 0.39
TUBB3-214ENST00000557490 KCNG1Q9UIX4 513 aa17.51■□□□□ 0.39
TUBB3-214ENST00000557490 B4GALT5O43286 388 aa17.5■□□□□ 0.39
TUBB3-214ENST00000557490 YEATS4O95619 227 aa17.5■□□□□ 0.39
TUBB3-214ENST00000557490 PRKCBP05771 671 aa17.5■□□□□ 0.39
TUBB3-214ENST00000557490 LAG3P18627 525 aa17.5■□□□□ 0.39
TUBB3-214ENST00000557490 SSTR3P32745 418 aaPredicted RBP17.5■□□□□ 0.39
TUBB3-214ENST00000557490 PEX3P56589 373 aa17.5■□□□□ 0.39
TUBB3-214ENST00000557490 RAD51AP2Q09MP3 1159 aa17.5■□□□□ 0.39
TUBB3-214ENST00000557490 PRPF4BQ13523 1007 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms