RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 HSD17B14Q9BPX1 270 aa15.78■□□□□ 0.12
SNX6-210ENST00000557341 GBP3Q9H0R5 595 aa15.78■□□□□ 0.12
SNX6-210ENST00000557341 ZBP1Q9H171 429 aa15.78■□□□□ 0.12
SNX6-210ENST00000557341 NRDE2Q9H7Z3 1164 aa15.78■□□□□ 0.12
SNX6-210ENST00000557341 RSAD1Q9HA92 442 aa15.78■□□□□ 0.12
SNX6-210ENST00000557341 XPNPEP1Q9NQW7 623 aa15.78■□□□□ 0.12
SNX6-210ENST00000557341 ANKEF1Q9NU02 776 aa15.78■□□□□ 0.12
SNX6-210ENST00000557341 LIMCH1Q9UPQ0 1083 aa15.78■□□□□ 0.12
SNX6-210ENST00000557341 MUC6Q6W4X9 2439 aa15.78■□□□□ 0.12
SNX6-210ENST00000557341 TRIP11Q15643 1979 aa15.77■□□□□ 0.12
SNX6-210ENST00000557341 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.77■□□□□ 0.12
SNX6-210ENST00000557341 POTEMA6NI47 508 aa15.77■□□□□ 0.12
SNX6-210ENST00000557341 HOXB8P17481 243 aaPredicted RBP15.77■□□□□ 0.12
SNX6-210ENST00000557341 AXLP30530 894 aa15.77■□□□□ 0.12
SNX6-210ENST00000557341 CBX2Q14781 532 aaPredicted RBP15.77■□□□□ 0.12
SNX6-210ENST00000557341 AGMOQ6ZNB7 445 aa15.77■□□□□ 0.12
SNX6-210ENST00000557341 CCDC83Q8IWF9 413 aa15.77■□□□□ 0.12
SNX6-210ENST00000557341 VPS52Q8N1B4 723 aa15.77■□□□□ 0.12
SNX6-210ENST00000557341 CNNM3Q8NE01 707 aa15.77■□□□□ 0.12
SNX6-210ENST00000557341 CCDC51Q96ER9 411 aa15.77■□□□□ 0.12
SNX6-210ENST00000557341 IGSF21Q96ID5 467 aa15.77■□□□□ 0.12
SNX6-210ENST00000557341 C8orf76Q96K31 380 aa15.77■□□□□ 0.12
SNX6-210ENST00000557341 MTMR9Q96QG7 549 aa15.77■□□□□ 0.12
SNX6-210ENST00000557341 DNAJB4Q9UDY4 337 aa15.77■□□□□ 0.12
SNX6-210ENST00000557341 HCFC2Q9Y5Z7 792 aa15.77■□□□□ 0.12
SNX6-210ENST00000557341 INO80B-WBP1J3KQ70 363 aa15.76■□□□□ 0.11
SNX6-210ENST00000557341 TSPAN1O60635 241 aa15.76■□□□□ 0.11
SNX6-210ENST00000557341 GALTP07902 379 aa15.76■□□□□ 0.11
SNX6-210ENST00000557341 CTSAP10619 480 aa15.76■□□□□ 0.11
SNX6-210ENST00000557341 NCLP19338 710 aaKnown RBP15.76■□□□□ 0.11
SNX6-210ENST00000557341 HOXA11P31270 313 aaPredicted RBP15.76■□□□□ 0.11
SNX6-210ENST00000557341 MCM7P33993 719 aa15.76■□□□□ 0.11
SNX6-210ENST00000557341 RARRES1P49788 294 aa15.76■□□□□ 0.11
SNX6-210ENST00000557341 PTENP60484 403 aa15.76■□□□□ 0.11
SNX6-210ENST00000557341 GUCY1B3Q02153 619 aa15.76■□□□□ 0.11
SNX6-210ENST00000557341 NCBP1Q09161 790 aaKnown RBP15.76■□□□□ 0.11
SNX6-210ENST00000557341 CAPSQ13938 189 aa15.76■□□□□ 0.11
SNX6-210ENST00000557341 GIT2Q14161 759 aa15.76■□□□□ 0.11
SNX6-210ENST00000557341 TPRNQ4KMQ1 711 aa15.76■□□□□ 0.11
SNX6-210ENST00000557341 UBXN11Q5T124 520 aa15.76■□□□□ 0.11
SNX6-210ENST00000557341 NOTUMQ6P988 496 aa15.76■□□□□ 0.11
SNX6-210ENST00000557341 SYCE2Q6PIF2 218 aa15.76■□□□□ 0.11
SNX6-210ENST00000557341 MRPL10Q7Z7H8 261 aaKnown RBP15.76■□□□□ 0.11
SNX6-210ENST00000557341 DDX53Q86TM3 631 aaKnown RBP15.76■□□□□ 0.11
SNX6-210ENST00000557341 IFNLR1Q8IU57 520 aaPredicted RBP15.76■□□□□ 0.11
SNX6-210ENST00000557341 TMEM87AQ8NBN3 555 aa15.76■□□□□ 0.11
SNX6-210ENST00000557341 RPGRIP1Q96KN7 1286 aa15.76■□□□□ 0.11
SNX6-210ENST00000557341 LLPHQ9BRT6 129 aaKnown RBP15.76■□□□□ 0.11
SNX6-210ENST00000557341 S1PR5Q9H228 398 aa15.76■□□□□ 0.11
SNX6-210ENST00000557341 STK39Q9UEW8 545 aa15.76■□□□□ 0.11
SNX6-210ENST00000557341 IRAK3Q9Y616 596 aa15.76■□□□□ 0.11
SNX6-210ENST00000557341 MYO10Q9HD67 2058 aa15.75■□□□□ 0.11
SNX6-210ENST00000557341 USO1O60763 962 aaKnown RBP15.75■□□□□ 0.11
SNX6-210ENST00000557341 CLASP2O75122 1294 aaKnown RBP15.75■□□□□ 0.11
SNX6-210ENST00000557341 CENPBP07199 599 aaPredicted RBP15.75■□□□□ 0.11
SNX6-210ENST00000557341 ATP2B1P20020 1258 aa15.75■□□□□ 0.11
SNX6-210ENST00000557341 SLC11A1P49279 550 aa15.75■□□□□ 0.11
SNX6-210ENST00000557341 HMGN5P82970 282 aaKnown RBP15.75■□□□□ 0.11
SNX6-210ENST00000557341 POU5F1BQ06416 359 aa15.75■□□□□ 0.11
SNX6-210ENST00000557341 ORC2Q13416 577 aaPredicted RBP15.75■□□□□ 0.11
SNX6-210ENST00000557341 CES5AQ6NT32 575 aa15.75■□□□□ 0.11
SNX6-210ENST00000557341 ASAP3Q8TDY4 903 aa15.75■□□□□ 0.11
SNX6-210ENST00000557341 PIGOQ8TEQ8 1089 aa15.75■□□□□ 0.11
SNX6-210ENST00000557341 BCL7CQ8WUZ0 217 aaPredicted RBP15.75■□□□□ 0.11
SNX6-210ENST00000557341 FAM193BQ96PV7 902 aaPredicted RBP15.75■□□□□ 0.11
SNX6-210ENST00000557341 TMEM175Q9BSA9 504 aa15.75■□□□□ 0.11
SNX6-210ENST00000557341 APOL5Q9BWW9 433 aa15.75■□□□□ 0.11
SNX6-210ENST00000557341 NFKBIZQ9BYH8 718 aa15.75■□□□□ 0.11
SNX6-210ENST00000557341 TMEM60Q9H2L4 133 aa15.75■□□□□ 0.11
SNX6-210ENST00000557341 TUFT1Q9NNX1 390 aa15.75■□□□□ 0.11
SNX6-210ENST00000557341 UBN1Q9NPG3 1134 aa15.75■□□□□ 0.11
SNX6-210ENST00000557341 KANSL3Q9P2N6 904 aa15.75■□□□□ 0.11
SNX6-210ENST00000557341 B4GALT3O60512 393 aa15.74■□□□□ 0.11
SNX6-210ENST00000557341 CXCL14O95715 111 aa15.74■□□□□ 0.11
SNX6-210ENST00000557341 ITGA4P13612 1032 aa15.74■□□□□ 0.11
SNX6-210ENST00000557341 ARL2P36404 184 aa15.74■□□□□ 0.11
SNX6-210ENST00000557341 MBTD1Q05BQ5 628 aa15.74■□□□□ 0.11
SNX6-210ENST00000557341 ZNF280BQ86YH2 543 aa15.74■□□□□ 0.11
SNX6-210ENST00000557341 SMG8Q8ND04 991 aaKnown RBP15.74■□□□□ 0.11
SNX6-210ENST00000557341 AUTS2Q8WXX7 1259 aa15.74■□□□□ 0.11
SNX6-210ENST00000557341 EDAQ92838 391 aa15.74■□□□□ 0.11
SNX6-210ENST00000557341 CPB2Q96IY4 423 aa15.74■□□□□ 0.11
SNX6-210ENST00000557341 EIF2AQ9BY44 585 aaKnown RBP15.74■□□□□ 0.11
SNX6-210ENST00000557341 TRIM6Q9C030 488 aaPredicted RBP15.74■□□□□ 0.11
SNX6-210ENST00000557341 POLR3FQ9H1D9 316 aaPredicted RBP15.74■□□□□ 0.11
SNX6-210ENST00000557341 FOXP1Q9H334 677 aaPredicted RBP15.74■□□□□ 0.11
SNX6-210ENST00000557341 DZANK1Q9NVP4 752 aa15.74■□□□□ 0.11
SNX6-210ENST00000557341 IPPQ9Y573 584 aa15.74■□□□□ 0.11
SNX6-210ENST00000557341 CITO14578 2027 aa15.73■□□□□ 0.11
SNX6-210ENST00000557341 DDHD2O94830 711 aa15.73■□□□□ 0.11
SNX6-210ENST00000557341 POMCP01189 267 aa15.73■□□□□ 0.11
SNX6-210ENST00000557341 OR52Z1P0C646 297 aa15.73■□□□□ 0.11
SNX6-210ENST00000557341 XRCC6P12956 609 aaKnown RBP eCLIP15.73■□□□□ 0.11
SNX6-210ENST00000557341 GLRA2P23416 452 aa15.73■□□□□ 0.11
SNX6-210ENST00000557341 MLH1P40692 756 aa15.73■□□□□ 0.11
SNX6-210ENST00000557341 AFF1P51825 1210 aaKnown RBP15.73■□□□□ 0.11
SNX6-210ENST00000557341 ITIH3Q06033 890 aa15.73■□□□□ 0.11
SNX6-210ENST00000557341 GNL2Q13823 731 aaKnown RBP15.73■□□□□ 0.11
SNX6-210ENST00000557341 HFE2Q6ZVN8 426 aa15.73■□□□□ 0.11
SNX6-210ENST00000557341 HACE1Q8IYU2 909 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms