RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 SPATA31D3P0C874 917 aa14.14□□□□□ -0.15
PSEN1-221ENST00000557293 SKIP12755 728 aa14.14□□□□□ -0.15
PSEN1-221ENST00000557293 CDC42EP1Q00587 391 aa14.14□□□□□ -0.15
PSEN1-221ENST00000557293 UBXN11Q5T124 520 aa14.14□□□□□ -0.15
PSEN1-221ENST00000557293 CREB3L3Q68CJ9 461 aa14.14□□□□□ -0.15
PSEN1-221ENST00000557293 LILRA6Q6PI73 481 aa14.14□□□□□ -0.15
PSEN1-221ENST00000557293 ZC3H14Q6PJT7 736 aaKnown RBP14.14□□□□□ -0.15
PSEN1-221ENST00000557293 SPATA31D4Q6ZUB0 917 aa14.14□□□□□ -0.15
PSEN1-221ENST00000557293 KSR1Q8IVT5 923 aa14.14□□□□□ -0.15
PSEN1-221ENST00000557293 PJA1Q8NG27 643 aa14.14□□□□□ -0.15
PSEN1-221ENST00000557293 SMG7Q92540 1137 aaKnown RBP14.14□□□□□ -0.15
PSEN1-221ENST00000557293 GJA10Q969M2 543 aa14.14□□□□□ -0.15
PSEN1-221ENST00000557293 HINFPQ9BQA5 517 aa14.14□□□□□ -0.15
PSEN1-221ENST00000557293 SH2D3AQ9BRG2 576 aa14.14□□□□□ -0.15
PSEN1-221ENST00000557293 DDX23Q9BUQ8 820 aaKnown RBP14.14□□□□□ -0.15
PSEN1-221ENST00000557293 HERC2P3Q9BVR0 1158 aa14.14□□□□□ -0.15
PSEN1-221ENST00000557293 ZMYND12Q9H0C1 365 aa14.14□□□□□ -0.15
PSEN1-221ENST00000557293 NT5C3AQ9H0P0 336 aa14.14□□□□□ -0.15
PSEN1-221ENST00000557293 IFT122Q9HBG6 1241 aa14.14□□□□□ -0.15
PSEN1-221ENST00000557293 RBM28Q9NW13 759 aaKnown RBP14.14□□□□□ -0.15
PSEN1-221ENST00000557293 PIN4Q9Y237 131 aaKnown RBP14.14□□□□□ -0.15
PSEN1-221ENST00000557293 MTF2Q9Y483 593 aaPredicted RBP14.14□□□□□ -0.15
PSEN1-221ENST00000557293 SAMM50Q9Y512 469 aa14.14□□□□□ -0.15
PSEN1-221ENST00000557293 PCDHB2Q9Y5E7 798 aa14.14□□□□□ -0.15
PSEN1-221ENST00000557293 COL4A3Q01955 1670 aa14.14□□□□□ -0.15
PSEN1-221ENST00000557293 ACACBO00763 2458 aa14.13□□□□□ -0.15
PSEN1-221ENST00000557293 ESYT2A0FGR8 921 aa14.13□□□□□ -0.15
PSEN1-221ENST00000557293 MSH4O15457 936 aa14.13□□□□□ -0.15
PSEN1-221ENST00000557293 HOXA11P31270 313 aaPredicted RBP14.13□□□□□ -0.15
PSEN1-221ENST00000557293 RAB27AP51159 221 aa14.13□□□□□ -0.15
PSEN1-221ENST00000557293 AK2P54819 239 aa14.13□□□□□ -0.15
PSEN1-221ENST00000557293 GPC5P78333 572 aa14.13□□□□□ -0.15
PSEN1-221ENST00000557293 SETQ01105 290 aaPredicted RBP14.13□□□□□ -0.15
PSEN1-221ENST00000557293 RTN1Q16799 776 aa14.13□□□□□ -0.15
PSEN1-221ENST00000557293 ZNF528Q3MIS6 628 aa14.13□□□□□ -0.15
PSEN1-221ENST00000557293 VARS2Q5ST30 1063 aaKnown RBP14.13□□□□□ -0.15
PSEN1-221ENST00000557293 B3GNT9Q6UX72 402 aa14.13□□□□□ -0.15
PSEN1-221ENST00000557293 HDAC7Q8WUI4 952 aa14.13□□□□□ -0.15
PSEN1-221ENST00000557293 STAMQ92783 540 aa14.13□□□□□ -0.15
PSEN1-221ENST00000557293 NELL1Q92832 810 aa14.13□□□□□ -0.15
PSEN1-221ENST00000557293 UNC45AQ9H3U1 944 aa14.13□□□□□ -0.15
PSEN1-221ENST00000557293 MIOSQ9NXC5 875 aa14.13□□□□□ -0.15
PSEN1-221ENST00000557293 STK39Q9UEW8 545 aa14.13□□□□□ -0.15
PSEN1-221ENST00000557293 SPTBN2O15020 2390 aa14.13□□□□□ -0.15
PSEN1-221ENST00000557293 DOCK6Q96HP0 2047 aa14.12□□□□□ -0.15
PSEN1-221ENST00000557293 F8W810 466 aa14.12□□□□□ -0.15
PSEN1-221ENST00000557293 MAFO75444 373 aaPredicted RBP14.12□□□□□ -0.15
PSEN1-221ENST00000557293 POMCP01189 267 aa14.12□□□□□ -0.15
PSEN1-221ENST00000557293 RFX1P22670 979 aa14.12□□□□□ -0.15
PSEN1-221ENST00000557293 SFPQP23246 707 aaKnown RBP eCLIP14.12□□□□□ -0.15
PSEN1-221ENST00000557293 PFKFB3Q16875 520 aaPredicted RBP14.12□□□□□ -0.15
PSEN1-221ENST00000557293 MTERF2Q49AM1 385 aa14.12□□□□□ -0.15
PSEN1-221ENST00000557293 CATSPER4Q7RTX7 472 aa14.12□□□□□ -0.15
PSEN1-221ENST00000557293 ZNF410Q86VK4 478 aa14.12□□□□□ -0.15
PSEN1-221ENST00000557293 COLGALT2Q8IYK4 626 aa14.12□□□□□ -0.15
PSEN1-221ENST00000557293 SLC5A5Q92911 643 aa14.12□□□□□ -0.15
PSEN1-221ENST00000557293 PGBD4Q96DM1 585 aa14.12□□□□□ -0.15
PSEN1-221ENST00000557293 RIT2Q99578 217 aa14.12□□□□□ -0.15
PSEN1-221ENST00000557293 INO80BQ9C086 356 aaPredicted RBP14.12□□□□□ -0.15
PSEN1-221ENST00000557293 MINDY3Q9H8M7 445 aa14.12□□□□□ -0.15
PSEN1-221ENST00000557293 RSAD1Q9HA92 442 aa14.12□□□□□ -0.15
PSEN1-221ENST00000557293 CHST7Q9NS84 486 aa14.12□□□□□ -0.15
PSEN1-221ENST00000557293 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.12□□□□□ -0.15
PSEN1-221ENST00000557293 KANSL3Q9P2N6 904 aa14.12□□□□□ -0.15
PSEN1-221ENST00000557293 SUCLA2Q9P2R7 463 aaPredicted RBP14.12□□□□□ -0.15
PSEN1-221ENST00000557293 NUMBLQ9Y6R0 609 aa14.12□□□□□ -0.15
PSEN1-221ENST00000557293 GAS2O43903 313 aaKnown RBP14.11□□□□□ -0.15
PSEN1-221ENST00000557293 KINO60870 393 aaKnown RBP14.11□□□□□ -0.15
PSEN1-221ENST00000557293 PSMD10O75832 226 aa14.11□□□□□ -0.15
PSEN1-221ENST00000557293 GLUD1P00367 558 aa14.11□□□□□ -0.15
PSEN1-221ENST00000557293 C1RP00736 705 aa14.11□□□□□ -0.15
PSEN1-221ENST00000557293 ADH1AP07327 375 aa14.11□□□□□ -0.15
PSEN1-221ENST00000557293 ADD1P35611 737 aaKnown RBP14.11□□□□□ -0.15
PSEN1-221ENST00000557293 DSG1Q02413 1049 aa14.11□□□□□ -0.15
PSEN1-221ENST00000557293 XKR3Q5GH77 459 aa14.11□□□□□ -0.15
PSEN1-221ENST00000557293 PARM1Q6UWI2 310 aa14.11□□□□□ -0.15
PSEN1-221ENST00000557293 SYNE3Q6ZMZ3 975 aa14.11□□□□□ -0.15
PSEN1-221ENST00000557293 PALB2Q86YC2 1186 aa14.11□□□□□ -0.15
PSEN1-221ENST00000557293 RHPN2Q8IUC4 686 aa14.11□□□□□ -0.15
PSEN1-221ENST00000557293 ZBTB44Q8NCP5 570 aa14.11□□□□□ -0.15
PSEN1-221ENST00000557293 SMG8Q8ND04 991 aaKnown RBP14.11□□□□□ -0.15
PSEN1-221ENST00000557293 FGF14Q92915 247 aa14.11□□□□□ -0.15
PSEN1-221ENST00000557293 BORCS6Q96GS4 357 aa14.11□□□□□ -0.15
PSEN1-221ENST00000557293 TCEANC2Q96MN5 208 aa14.11□□□□□ -0.15
PSEN1-221ENST00000557293 PRKD2Q9BZL6 878 aa14.11□□□□□ -0.15
PSEN1-221ENST00000557293 RNF39Q9H2S5 420 aa14.11□□□□□ -0.15
PSEN1-221ENST00000557293 AGPAT5Q9NUQ2 364 aa14.11□□□□□ -0.15
PSEN1-221ENST00000557293 FBXO4Q9UKT5 387 aa14.11□□□□□ -0.15
PSEN1-221ENST00000557293 MTCL1Q9Y4B5 1905 aaKnown RBP14.1□□□□□ -0.15
PSEN1-221ENST00000557293 KANSL1LA0AUZ9 987 aa14.1□□□□□ -0.15
PSEN1-221ENST00000557293 ZBTB43O43298 467 aa14.1□□□□□ -0.15
PSEN1-221ENST00000557293 TGM5O43548 720 aa14.1□□□□□ -0.15
PSEN1-221ENST00000557293 LILRB5O75023 590 aa14.1□□□□□ -0.15
PSEN1-221ENST00000557293 URODP06132 367 aa14.1□□□□□ -0.15
PSEN1-221ENST00000557293 GLUD2P49448 558 aa14.1□□□□□ -0.15
PSEN1-221ENST00000557293 DSC1Q08554 894 aa14.1□□□□□ -0.15
PSEN1-221ENST00000557293 SNW1Q13573 536 aaKnown RBP14.1□□□□□ -0.15
PSEN1-221ENST00000557293 URGCPQ8TCY9 931 aa14.1□□□□□ -0.15
PSEN1-221ENST00000557293 B3GALT6Q96L58 329 aa14.1□□□□□ -0.15
PSEN1-221ENST00000557293 PLEKHA4Q9H4M7 779 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms