RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 PSAPP07602 524 aa9.81□□□□□ -0.84
VRK1-206ENST00000557222 FAM86B2P0C5J1 330 aa9.81□□□□□ -0.84
VRK1-206ENST00000557222 HOXB8P17481 243 aaPredicted RBP9.81□□□□□ -0.84
VRK1-206ENST00000557222 TMOD1P28289 359 aa9.81□□□□□ -0.84
VRK1-206ENST00000557222 CIITAP33076 1130 aa9.81□□□□□ -0.84
VRK1-206ENST00000557222 PPM1AP35813 382 aa9.81□□□□□ -0.84
VRK1-206ENST00000557222 CDC42EP1Q00587 391 aa9.81□□□□□ -0.84
VRK1-206ENST00000557222 KCNC3Q14003 757 aa9.81□□□□□ -0.84
VRK1-206ENST00000557222 COL9A3Q14050 684 aaPredicted RBP9.81□□□□□ -0.84
VRK1-206ENST00000557222 DSC3Q14574 896 aa9.81□□□□□ -0.84
VRK1-206ENST00000557222 TMEM266Q2M3C6 531 aa9.81□□□□□ -0.84
VRK1-206ENST00000557222 SPOUT1Q5T280 376 aaKnown RBP9.81□□□□□ -0.84
VRK1-206ENST00000557222 SWSAP1Q6NVH7 229 aa9.81□□□□□ -0.84
VRK1-206ENST00000557222 RBM23Q86U06 439 aaKnown RBP9.81□□□□□ -0.84
VRK1-206ENST00000557222 COLGALT1Q8NBJ5 622 aa9.81□□□□□ -0.84
VRK1-206ENST00000557222 RNF217Q8TC41 542 aa9.81□□□□□ -0.84
VRK1-206ENST00000557222 MRPS27Q92552 414 aaKnown RBP9.81□□□□□ -0.84
VRK1-206ENST00000557222 PBXIP1Q96AQ6 731 aa9.81□□□□□ -0.84
VRK1-206ENST00000557222 FAM167AQ96KS9 214 aa9.81□□□□□ -0.84
VRK1-206ENST00000557222 ZMYND12Q9H0C1 365 aa9.81□□□□□ -0.84
VRK1-206ENST00000557222 TMEM117Q9H0C3 514 aa9.81□□□□□ -0.84
VRK1-206ENST00000557222 IRF2BPLQ9H1B7 796 aa9.81□□□□□ -0.84
VRK1-206ENST00000557222 TYW1Q9NV66 732 aaKnown RBP9.81□□□□□ -0.84
VRK1-206ENST00000557222 PCDHA10Q9Y5I2 948 aa9.81□□□□□ -0.84
VRK1-206ENST00000557222 EVPLQ92817 2033 aa9.81□□□□□ -0.84
VRK1-206ENST00000557222 ZFHX2Q9C0A1 2572 aaPredicted RBP9.81□□□□□ -0.84
VRK1-206ENST00000557222 FNDC1Q4ZHG4 1894 aaPredicted RBP9.81□□□□□ -0.84
VRK1-206ENST00000557222 KIAA1671Q9BY89 1806 aa9.8□□□□□ -0.84
VRK1-206ENST00000557222 GOLGA8AA7E2F4 631 aa9.8□□□□□ -0.84
VRK1-206ENST00000557222 GOLGA8BA8MQT2 603 aa9.8□□□□□ -0.84
VRK1-206ENST00000557222 ATP4AP20648 1035 aa9.8□□□□□ -0.84
VRK1-206ENST00000557222 GNA11P29992 359 aa9.8□□□□□ -0.84
VRK1-206ENST00000557222 GATMP50440 423 aa9.8□□□□□ -0.84
VRK1-206ENST00000557222 ERVFC1P60507 584 aa9.8□□□□□ -0.84
VRK1-206ENST00000557222 KRT17Q04695 432 aa9.8□□□□□ -0.84
VRK1-206ENST00000557222 SIGLEC14Q08ET2 396 aa9.8□□□□□ -0.84
VRK1-206ENST00000557222 PFKFB3Q16875 520 aaPredicted RBP9.8□□□□□ -0.84
VRK1-206ENST00000557222 BMP2KLQ5H9B9 411 aa9.8□□□□□ -0.84
VRK1-206ENST00000557222 FAM102BQ5T8I3 360 aa9.8□□□□□ -0.84
VRK1-206ENST00000557222 FOXD4L5Q5VV16 416 aaPredicted RBP9.8□□□□□ -0.84
VRK1-206ENST00000557222 FAM228AQ86W67 206 aa9.8□□□□□ -0.84
VRK1-206ENST00000557222 RAB11FIP4Q86YS3 637 aa9.8□□□□□ -0.84
VRK1-206ENST00000557222 SUGP1Q8IWZ8 645 aaKnown RBP9.8□□□□□ -0.84
VRK1-206ENST00000557222 THNSL1Q8IYQ7 743 aa9.8□□□□□ -0.84
VRK1-206ENST00000557222 TMEM40Q8WWA1 233 aa9.8□□□□□ -0.84
VRK1-206ENST00000557222 PGBD1Q96JS3 809 aa9.8□□□□□ -0.84
VRK1-206ENST00000557222 YTHDC1Q96MU7 727 aaKnown RBP9.8□□□□□ -0.84
VRK1-206ENST00000557222 ZNF577Q9BSK1 485 aa9.8□□□□□ -0.84
VRK1-206ENST00000557222 S1PR5Q9H228 398 aa9.8□□□□□ -0.84
VRK1-206ENST00000557222 CWH43Q9H720 699 aa9.8□□□□□ -0.84
VRK1-206ENST00000557222 C6orf50Q9HD87 102 aa9.8□□□□□ -0.84
VRK1-206ENST00000557222 TMEM260Q9NX78 707 aa9.8□□□□□ -0.84
VRK1-206ENST00000557222 TCEAL9Q9UHQ7 104 aa9.8□□□□□ -0.84
VRK1-206ENST00000557222 BRPF3Q9ULD4 1205 aa9.8□□□□□ -0.84
VRK1-206ENST00000557222 BARX2Q9UMQ3 279 aaPredicted RBP9.8□□□□□ -0.84
VRK1-206ENST00000557222 GINS2Q9Y248 185 aa9.8□□□□□ -0.84
VRK1-206ENST00000557222 PCDHB11Q9Y5F2 797 aa9.8□□□□□ -0.84
VRK1-206ENST00000557222 MYH9P35579 1960 aaKnown RBP9.8□□□□□ -0.84
VRK1-206ENST00000557222 PTPRZ1P23471 2315 aaPredicted RBP9.8□□□□□ -0.84
VRK1-206ENST00000557222 USP34Q70CQ2 3546 aa9.8□□□□□ -0.84
VRK1-206ENST00000557222 RIF1Q5UIP0 2472 aaKnown RBP9.79□□□□□ -0.84
VRK1-206ENST00000557222 SLC35F4A4IF30 521 aa9.79□□□□□ -0.84
VRK1-206ENST00000557222 EOMESO95936 686 aa9.79□□□□□ -0.84
VRK1-206ENST00000557222 ZSCAN20P17040 1043 aaPredicted RBP9.79□□□□□ -0.84
VRK1-206ENST00000557222 EIF4BP23588 611 aaKnown RBP9.79□□□□□ -0.84
VRK1-206ENST00000557222 SCTRP47872 440 aa9.79□□□□□ -0.84
VRK1-206ENST00000557222 KIZQ2M2Z5 673 aa9.79□□□□□ -0.84
VRK1-206ENST00000557222 ANKRD54Q6NXT1 300 aa9.79□□□□□ -0.84
VRK1-206ENST00000557222 CKAP2LQ8IYA6 745 aa9.79□□□□□ -0.84
VRK1-206ENST00000557222 LRRC43Q8N309 656 aa9.79□□□□□ -0.84
VRK1-206ENST00000557222 FBXL16Q8N461 479 aa9.79□□□□□ -0.84
VRK1-206ENST00000557222 FBXL6Q8N531 539 aa9.79□□□□□ -0.84
VRK1-206ENST00000557222 METTL13Q8N6R0 699 aa9.79□□□□□ -0.84
VRK1-206ENST00000557222 LINC01465Q8N7H1 131 aa9.79□□□□□ -0.84
VRK1-206ENST00000557222 BICD2Q8TD16 824 aa9.79□□□□□ -0.84
VRK1-206ENST00000557222 CASD1Q96PB1 797 aa9.79□□□□□ -0.84
VRK1-206ENST00000557222 MAP7D2Q96T17 732 aa9.79□□□□□ -0.84
VRK1-206ENST00000557222 OSMRQ99650 979 aa9.79□□□□□ -0.84
VRK1-206ENST00000557222 ADAMTS10Q9H324 1103 aa9.79□□□□□ -0.84
VRK1-206ENST00000557222 NRBP2Q9NSY0 501 aa9.79□□□□□ -0.84
VRK1-206ENST00000557222 A0A0U1RQF3 1178 aa9.78□□□□□ -0.84
VRK1-206ENST00000557222 KLF18A0A0U1RQI7 1052 aa9.78□□□□□ -0.84
VRK1-206ENST00000557222 WDR64B1ANS9 1081 aa9.78□□□□□ -0.84
VRK1-206ENST00000557222 DDX39AO00148 427 aaKnown RBP9.78□□□□□ -0.84
VRK1-206ENST00000557222 PER2O15055 1255 aa9.78□□□□□ -0.84
VRK1-206ENST00000557222 PRPF3O43395 683 aaKnown RBP9.78□□□□□ -0.84
VRK1-206ENST00000557222 CSPG5O95196 566 aa9.78□□□□□ -0.84
VRK1-206ENST00000557222 CDC27P30260 824 aa9.78□□□□□ -0.84
VRK1-206ENST00000557222 USP11P51784 963 aa9.78□□□□□ -0.84
VRK1-206ENST00000557222 ITIH3Q06033 890 aa9.78□□□□□ -0.84
VRK1-206ENST00000557222 BMS1Q14692 1282 aaKnown RBP9.78□□□□□ -0.84
VRK1-206ENST00000557222 PTPN21Q16825 1174 aa9.78□□□□□ -0.84
VRK1-206ENST00000557222 JAKMIP3Q5VZ66 844 aa9.78□□□□□ -0.84
VRK1-206ENST00000557222 EFCAB12Q6NXP0 572 aa9.78□□□□□ -0.84
VRK1-206ENST00000557222 KCNT2Q6UVM3 1135 aa9.78□□□□□ -0.84
VRK1-206ENST00000557222 ECHDC2Q86YB7 292 aa9.78□□□□□ -0.84
VRK1-206ENST00000557222 ABI1Q8IZP0 508 aa9.78□□□□□ -0.84
VRK1-206ENST00000557222 REXO1Q8N1G1 1221 aaKnown RBP9.78□□□□□ -0.84
VRK1-206ENST00000557222 VN1R2Q8NFZ6 395 aa9.78□□□□□ -0.84
VRK1-206ENST00000557222 CASP10Q92851 521 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms