RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 NOTUMQ6P988 496 aa19.28■□□□□ 0.68
PSEN1-218ENST00000556864 APBB1IPQ7Z5R6 666 aaPredicted RBP19.28■□□□□ 0.68
PSEN1-218ENST00000556864 TMEM161BQ8NDZ6 487 aa19.28■□□□□ 0.68
PSEN1-218ENST00000556864 KCNN1Q92952 543 aa19.28■□□□□ 0.68
PSEN1-218ENST00000556864 TSPYL2Q9H2G4 693 aaPredicted RBP19.28■□□□□ 0.68
PSEN1-218ENST00000556864 TMX1Q9H3N1 280 aa19.28■□□□□ 0.68
PSEN1-218ENST00000556864 FZD8Q9H461 694 aa19.28■□□□□ 0.68
PSEN1-218ENST00000556864 ST6GALNAC4Q9H4F1 302 aa19.28■□□□□ 0.68
PSEN1-218ENST00000556864 MRPL44Q9H9J2 332 aaKnown RBP19.28■□□□□ 0.68
PSEN1-218ENST00000556864 EXOC1Q9NV70 894 aa19.28■□□□□ 0.68
PSEN1-218ENST00000556864 SLC4A7Q9Y6M7 1214 aa19.28■□□□□ 0.68
PSEN1-218ENST00000556864 ACKR2O00590 384 aa19.27■□□□□ 0.68
PSEN1-218ENST00000556864 SKIP12755 728 aa19.27■□□□□ 0.68
PSEN1-218ENST00000556864 RAB27AP51159 221 aa19.27■□□□□ 0.68
PSEN1-218ENST00000556864 CUL4BQ13620 913 aa19.27■□□□□ 0.68
PSEN1-218ENST00000556864 DSC3Q14574 896 aa19.27■□□□□ 0.68
PSEN1-218ENST00000556864 SHHQ15465 462 aa19.27■□□□□ 0.68
PSEN1-218ENST00000556864 AMHR2Q16671 573 aa19.27■□□□□ 0.68
PSEN1-218ENST00000556864 RASIP1Q5U651 963 aa19.27■□□□□ 0.68
PSEN1-218ENST00000556864 TWF2Q6IBS0 349 aaKnown RBP19.27■□□□□ 0.68
PSEN1-218ENST00000556864 HAUS6Q7Z4H7 955 aa19.27■□□□□ 0.68
PSEN1-218ENST00000556864 ADAM2Q99965 735 aa19.27■□□□□ 0.68
PSEN1-218ENST00000556864 MRPL4Q9BYD3 311 aaKnown RBP19.27■□□□□ 0.68
PSEN1-218ENST00000556864 PRO3102Q9H379 93 aa19.27■□□□□ 0.68
PSEN1-218ENST00000556864 RGS18Q9NS28 235 aa19.27■□□□□ 0.68
PSEN1-218ENST00000556864 N4BP3O15049 544 aa19.26■□□□□ 0.67
PSEN1-218ENST00000556864 FAM26FQ5R3K3 315 aa19.26■□□□□ 0.67
PSEN1-218ENST00000556864 ELOA2Q8IYF1 753 aaPredicted RBP19.26■□□□□ 0.67
PSEN1-218ENST00000556864 PHOSPHO2Q8TCD6 241 aa19.26■□□□□ 0.67
PSEN1-218ENST00000556864 LINC01599Q8WXQ3 324 aa19.26■□□□□ 0.67
PSEN1-218ENST00000556864 LMBRD1Q9NUN5 540 aa19.26■□□□□ 0.67
PSEN1-218ENST00000556864 UBE4BO95155 1302 aa19.25■□□□□ 0.67
PSEN1-218ENST00000556864 MGEA5O60502 916 aa19.25■□□□□ 0.67
PSEN1-218ENST00000556864 SMC2O95347 1197 aa19.25■□□□□ 0.67
PSEN1-218ENST00000556864 GCNT3O95395 438 aa19.25■□□□□ 0.67
PSEN1-218ENST00000556864 MBD3O95983 291 aa19.25■□□□□ 0.67
PSEN1-218ENST00000556864 STAG3L1P0CL83 205 aa19.25■□□□□ 0.67
PSEN1-218ENST00000556864 ARF4P18085 180 aaPredicted RBP19.25■□□□□ 0.67
PSEN1-218ENST00000556864 CASP1P29466 404 aa19.25■□□□□ 0.67
PSEN1-218ENST00000556864 SARSP49591 514 aaKnown RBP19.25■□□□□ 0.67
PSEN1-218ENST00000556864 SLC24A5Q71RS6 500 aa19.25■□□□□ 0.67
PSEN1-218ENST00000556864 NPAS4Q8IUM7 802 aa19.25■□□□□ 0.67
PSEN1-218ENST00000556864 HACE1Q8IYU2 909 aa19.25■□□□□ 0.67
PSEN1-218ENST00000556864 MYOCDQ8IZQ8 938 aa19.25■□□□□ 0.67
PSEN1-218ENST00000556864 BICD1Q96G01 975 aa19.25■□□□□ 0.67
PSEN1-218ENST00000556864 FIZ1Q96SL8 496 aa19.25■□□□□ 0.67
PSEN1-218ENST00000556864 ADPGKQ9BRR6 497 aa19.25■□□□□ 0.67
PSEN1-218ENST00000556864 RMND1Q9NWS8 449 aa19.25■□□□□ 0.67
PSEN1-218ENST00000556864 CXXC1Q9P0U4 656 aaPredicted RBP19.25■□□□□ 0.67
PSEN1-218ENST00000556864 LRFN2Q9ULH4 789 aa19.25■□□□□ 0.67
PSEN1-218ENST00000556864 EXOC7Q9UPT5 735 aa19.25■□□□□ 0.67
PSEN1-218ENST00000556864 PCDHB13Q9Y5F0 798 aa19.25■□□□□ 0.67
PSEN1-218ENST00000556864 MICAL3Q7RTP6 2002 aa19.25■□□□□ 0.67
PSEN1-218ENST00000556864 MYH11P35749 1972 aa19.24■□□□□ 0.67
PSEN1-218ENST00000556864 B4GALT5O43286 388 aa19.24■□□□□ 0.67
PSEN1-218ENST00000556864 RPN1P04843 607 aaKnown RBP19.24■□□□□ 0.67
PSEN1-218ENST00000556864 PRR29P0C7W0 189 aa19.24■□□□□ 0.67
PSEN1-218ENST00000556864 ATP2A2P16615 1042 aaKnown RBP19.24■□□□□ 0.67
PSEN1-218ENST00000556864 PTMSP20962 102 aa19.24■□□□□ 0.67
PSEN1-218ENST00000556864 NMT1P30419 496 aaKnown RBP19.24■□□□□ 0.67
PSEN1-218ENST00000556864 DPYDQ12882 1025 aa19.24■□□□□ 0.67
PSEN1-218ENST00000556864 DCAF4L1Q3SXM0 396 aa19.24■□□□□ 0.67
PSEN1-218ENST00000556864 SLC27A1Q6PCB7 646 aa19.24■□□□□ 0.67
PSEN1-218ENST00000556864 ZPBP2Q6X784 338 aa19.24■□□□□ 0.67
PSEN1-218ENST00000556864 MAP4K3Q8IVH8 894 aa19.24■□□□□ 0.67
PSEN1-218ENST00000556864 CPB2Q96IY4 423 aa19.24■□□□□ 0.67
PSEN1-218ENST00000556864 TRAIPQ9BWF2 469 aa19.24■□□□□ 0.67
PSEN1-218ENST00000556864 TRIM6Q9C030 488 aaPredicted RBP19.24■□□□□ 0.67
PSEN1-218ENST00000556864 TBC1D7Q9P0N9 293 aa19.24■□□□□ 0.67
PSEN1-218ENST00000556864 TBX20Q9UMR3 447 aa19.24■□□□□ 0.67
PSEN1-218ENST00000556864 PDE4DIPQ5VU43 2346 aa19.24■□□□□ 0.67
PSEN1-218ENST00000556864 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.23■□□□□ 0.67
PSEN1-218ENST00000556864 C9IYK1 514 aa19.23■□□□□ 0.67
PSEN1-218ENST00000556864 ENPP3O14638 875 aa19.23■□□□□ 0.67
PSEN1-218ENST00000556864 EIF3DO15371 548 aaKnown RBP eCLIP19.23■□□□□ 0.67
PSEN1-218ENST00000556864 LIG4P49917 911 aa19.23■□□□□ 0.67
PSEN1-218ENST00000556864 DEFB103AP81534 67 aa19.23■□□□□ 0.67
PSEN1-218ENST00000556864 GTF2BQ00403 316 aa19.23■□□□□ 0.67
PSEN1-218ENST00000556864 PSMD2Q13200 908 aa19.23■□□□□ 0.67
PSEN1-218ENST00000556864 ATF7IP2Q5U623 682 aa19.23■□□□□ 0.67
PSEN1-218ENST00000556864 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.23■□□□□ 0.67
PSEN1-218ENST00000556864 ZNF720Q7Z2F6 126 aa19.23■□□□□ 0.67
PSEN1-218ENST00000556864 GTPBP4Q9BZE4 634 aaKnown RBP19.23■□□□□ 0.67
PSEN1-218ENST00000556864 PDZD7Q9H5P4 517 aa19.23■□□□□ 0.67
PSEN1-218ENST00000556864 ELAC1Q9H777 363 aaKnown RBP19.23■□□□□ 0.67
PSEN1-218ENST00000556864 COLQQ9Y215 455 aaPredicted RBP19.23■□□□□ 0.67
PSEN1-218ENST00000556864 TNFSF13BQ9Y275 285 aa19.23■□□□□ 0.67
PSEN1-218ENST00000556864 HNRNPDLO14979 420 aaKnown RBP19.22■□□□□ 0.67
PSEN1-218ENST00000556864 HOXA2O43364 376 aa19.22■□□□□ 0.67
PSEN1-218ENST00000556864 KLRC4O43908 158 aa19.22■□□□□ 0.67
PSEN1-218ENST00000556864 PPP1R37O75864 691 aa19.22■□□□□ 0.67
PSEN1-218ENST00000556864 PIGRP01833 764 aa19.22■□□□□ 0.67
PSEN1-218ENST00000556864 HOXA11P31270 313 aaPredicted RBP19.22■□□□□ 0.67
PSEN1-218ENST00000556864 EHHADHQ08426 723 aa19.22■□□□□ 0.67
PSEN1-218ENST00000556864 PNOCQ13519 176 aa19.22■□□□□ 0.67
PSEN1-218ENST00000556864 KCNB1Q14721 858 aa19.22■□□□□ 0.67
PSEN1-218ENST00000556864 KMT5BQ4FZB7 885 aa19.22■□□□□ 0.67
PSEN1-218ENST00000556864 L1TD1Q5T7N2 865 aaKnown RBP19.22■□□□□ 0.67
PSEN1-218ENST00000556864 TAS1R3Q7RTX0 852 aa19.22■□□□□ 0.67
PSEN1-218ENST00000556864 HERC6Q8IVU3 1022 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms