RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-222ENST00000556778 GPBP1Q86WP2 473 aa9.76□□□□□ -0.85
PRKCH-222ENST00000556778 USP38Q8NB14 1042 aa9.76□□□□□ -0.85
PRKCH-222ENST00000556778 TOP1MTQ969P6 601 aa9.76□□□□□ -0.85
PRKCH-222ENST00000556778 CPB2Q96IY4 423 aa9.76□□□□□ -0.85
PRKCH-222ENST00000556778 SPATA32Q96LK8 384 aa9.76□□□□□ -0.85
PRKCH-222ENST00000556778 NT5C3AQ9H0P0 336 aa9.76□□□□□ -0.85
PRKCH-222ENST00000556778 TTYH1Q9H313 450 aaPredicted RBP9.76□□□□□ -0.85
PRKCH-222ENST00000556778 RGS18Q9NS28 235 aa9.76□□□□□ -0.85
PRKCH-222ENST00000556778 TSR3Q9UJK0 312 aaKnown RBP9.76□□□□□ -0.85
PRKCH-222ENST00000556778 SQORQ9Y6N5 450 aa9.76□□□□□ -0.85
PRKCH-222ENST00000556778 MORC2Q9Y6X9 1032 aaPredicted RBP9.76□□□□□ -0.85
PRKCH-222ENST00000556778 LAMA2P24043 3122 aaKnown RBP9.76□□□□□ -0.85
PRKCH-222ENST00000556778 PDE4DIPQ5VU43 2346 aa9.75□□□□□ -0.85
PRKCH-222ENST00000556778 A0A1B0GVL5 298 aa9.75□□□□□ -0.85
PRKCH-222ENST00000556778 LRRIQ4A6NIV6 560 aa9.75□□□□□ -0.85
PRKCH-222ENST00000556778 MEIS3P2A8K0S8 358 aa9.75□□□□□ -0.85
PRKCH-222ENST00000556778 INO80B-WBP1J3KQ70 363 aa9.75□□□□□ -0.85
PRKCH-222ENST00000556778 RFXAPO00287 272 aa9.75□□□□□ -0.85
PRKCH-222ENST00000556778 ASAP2O43150 1006 aa9.75□□□□□ -0.85
PRKCH-222ENST00000556778 TSPAN1O60635 241 aa9.75□□□□□ -0.85
PRKCH-222ENST00000556778 GJB5O95377 273 aa9.75□□□□□ -0.85
PRKCH-222ENST00000556778 AMHP03971 560 aa9.75□□□□□ -0.85
PRKCH-222ENST00000556778 CA3P07451 260 aa9.75□□□□□ -0.85
PRKCH-222ENST00000556778 FGFR1P11362 822 aa9.75□□□□□ -0.85
PRKCH-222ENST00000556778 NPTX2P47972 431 aa9.75□□□□□ -0.85
PRKCH-222ENST00000556778 KRT85P78386 507 aa9.75□□□□□ -0.85
PRKCH-222ENST00000556778 SMAD3P84022 425 aaKnown RBP9.75□□□□□ -0.85
PRKCH-222ENST00000556778 MXD4Q14582 209 aaPredicted RBP9.75□□□□□ -0.85
PRKCH-222ENST00000556778 UBXN11Q5T124 520 aa9.75□□□□□ -0.85
PRKCH-222ENST00000556778 RESP18Q5W5W9 173 aa9.75□□□□□ -0.85
PRKCH-222ENST00000556778 ATL3Q6DD88 541 aa9.75□□□□□ -0.85
PRKCH-222ENST00000556778 DYMQ7RTS9 669 aa9.75□□□□□ -0.85
PRKCH-222ENST00000556778 CATSPER4Q7RTX7 472 aa9.75□□□□□ -0.85
PRKCH-222ENST00000556778 EXOC8Q8IYI6 725 aa9.75□□□□□ -0.85
PRKCH-222ENST00000556778 MCPH1Q8NEM0 835 aa9.75□□□□□ -0.85
PRKCH-222ENST00000556778 PHOSPHO2Q8TCD6 241 aa9.75□□□□□ -0.85
PRKCH-222ENST00000556778 KCNG4Q8TDN1 519 aa9.75□□□□□ -0.85
PRKCH-222ENST00000556778 APBB2Q92870 758 aa9.75□□□□□ -0.85
PRKCH-222ENST00000556778 LPPQ93052 612 aa9.75□□□□□ -0.85
PRKCH-222ENST00000556778 DHX58Q96C10 678 aa9.75□□□□□ -0.85
PRKCH-222ENST00000556778 REEP2Q9BRK0 252 aa9.75□□□□□ -0.85
PRKCH-222ENST00000556778 INO80BQ9C086 356 aaPredicted RBP9.75□□□□□ -0.85
PRKCH-222ENST00000556778 RNF19AQ9NV58 838 aa9.75□□□□□ -0.85
PRKCH-222ENST00000556778 CCDC39Q9UFE4 941 aa9.75□□□□□ -0.85
PRKCH-222ENST00000556778 PIN4Q9Y237 131 aaKnown RBP9.75□□□□□ -0.85
PRKCH-222ENST00000556778 DENND3A2RUS2 1198 aa9.74□□□□□ -0.85
PRKCH-222ENST00000556778 CCDC169A6NNP5 214 aa9.74□□□□□ -0.85
PRKCH-222ENST00000556778 C9IYK1 514 aa9.74□□□□□ -0.85
PRKCH-222ENST00000556778 SLC16A4O15374 487 aa9.74□□□□□ -0.85
PRKCH-222ENST00000556778 POLR2DO15514 142 aaKnown RBP9.74□□□□□ -0.85
PRKCH-222ENST00000556778 TLL1O43897 1013 aa9.74□□□□□ -0.85
PRKCH-222ENST00000556778 GAS2O43903 313 aaKnown RBP9.74□□□□□ -0.85
PRKCH-222ENST00000556778 GUCY2CP25092 1073 aa9.74□□□□□ -0.85
PRKCH-222ENST00000556778 DNAJB2P25686 324 aa9.74□□□□□ -0.85
PRKCH-222ENST00000556778 STAT6P42226 847 aa9.74□□□□□ -0.85
PRKCH-222ENST00000556778 PHKA2P46019 1235 aa9.74□□□□□ -0.85
PRKCH-222ENST00000556778 AFF1P51825 1210 aaKnown RBP9.74□□□□□ -0.85
PRKCH-222ENST00000556778 FAM189BP81408 668 aa9.74□□□□□ -0.85
PRKCH-222ENST00000556778 CDC42EP1Q00587 391 aa9.74□□□□□ -0.85
PRKCH-222ENST00000556778 TFDP1Q14186 410 aa9.74□□□□□ -0.85
PRKCH-222ENST00000556778 GRIN2CQ14957 1233 aa9.74□□□□□ -0.85
PRKCH-222ENST00000556778 TAS1R3Q7RTX0 852 aa9.74□□□□□ -0.85
PRKCH-222ENST00000556778 SRGAP1Q7Z6B7 1085 aa9.74□□□□□ -0.85
PRKCH-222ENST00000556778 METTL3Q86U44 580 aaKnown RBP9.74□□□□□ -0.85
PRKCH-222ENST00000556778 GRAMD1CQ8IYS0 662 aa9.74□□□□□ -0.85
PRKCH-222ENST00000556778 RNF169Q8NCN4 708 aa9.74□□□□□ -0.85
PRKCH-222ENST00000556778 LARP4BQ92615 738 aaKnown RBP9.74□□□□□ -0.85
PRKCH-222ENST00000556778 HPS3Q969F9 1004 aa9.74□□□□□ -0.85
PRKCH-222ENST00000556778 TIFAQ96CG3 184 aa9.74□□□□□ -0.85
PRKCH-222ENST00000556778 SLC9A7Q96T83 725 aa9.74□□□□□ -0.85
PRKCH-222ENST00000556778 EIF2AQ9BY44 585 aaKnown RBP9.74□□□□□ -0.85
PRKCH-222ENST00000556778 CCDC113Q9H0I3 377 aa9.74□□□□□ -0.85
PRKCH-222ENST00000556778 CXCL16Q9H2A7 254 aa9.74□□□□□ -0.85
PRKCH-222ENST00000556778 MTIF3Q9H2K0 278 aaKnown RBP9.74□□□□□ -0.85
PRKCH-222ENST00000556778 IKZF4Q9H2S9 585 aa9.74□□□□□ -0.85
PRKCH-222ENST00000556778 SEMA6BQ9H3T3 888 aa9.74□□□□□ -0.85
PRKCH-222ENST00000556778 FZD8Q9H461 694 aa9.74□□□□□ -0.85
PRKCH-222ENST00000556778 GOLPH3LQ9H4A5 285 aa9.74□□□□□ -0.85
PRKCH-222ENST00000556778 ZHX3Q9H4I2 956 aa9.74□□□□□ -0.85
PRKCH-222ENST00000556778 HES2Q9Y543 173 aa9.74□□□□□ -0.85
PRKCH-222ENST00000556778 RCCD1A6NED2 376 aa9.73□□□□□ -0.85
PRKCH-222ENST00000556778 EPOPA6NHQ4 379 aa9.73□□□□□ -0.85
PRKCH-222ENST00000556778 GADD45BO75293 160 aaPredicted RBP9.73□□□□□ -0.85
PRKCH-222ENST00000556778 DGKIO75912 1065 aa9.73□□□□□ -0.85
PRKCH-222ENST00000556778 PFKFB1P16118 471 aa9.73□□□□□ -0.85
PRKCH-222ENST00000556778 ZSCAN20P17040 1043 aaPredicted RBP9.73□□□□□ -0.85
PRKCH-222ENST00000556778 ATF7P17544 494 aaPredicted RBP9.73□□□□□ -0.85
PRKCH-222ENST00000556778 ARF4P18085 180 aaPredicted RBP9.73□□□□□ -0.85
PRKCH-222ENST00000556778 SFPQP23246 707 aaKnown RBP eCLIP9.73□□□□□ -0.85
PRKCH-222ENST00000556778 NAMPTP43490 491 aa9.73□□□□□ -0.85
PRKCH-222ENST00000556778 SARSP49591 514 aaKnown RBP9.73□□□□□ -0.85
PRKCH-222ENST00000556778 NDUFA8P51970 172 aa9.73□□□□□ -0.85
PRKCH-222ENST00000556778 HTRA4P83105 476 aaPredicted RBP9.73□□□□□ -0.85
PRKCH-222ENST00000556778 TAP1Q03518 808 aa9.73□□□□□ -0.85
PRKCH-222ENST00000556778 POU5F1BQ06416 359 aa9.73□□□□□ -0.85
PRKCH-222ENST00000556778 PAN2Q504Q3 1202 aaKnown RBP9.73□□□□□ -0.85
PRKCH-222ENST00000556778 NT5DC1Q5TFE4 455 aa9.73□□□□□ -0.85
PRKCH-222ENST00000556778 EEF1DP3Q658K8 133 aa9.73□□□□□ -0.85
PRKCH-222ENST00000556778 CDCA2Q69YH5 1023 aaPredicted RBP9.73□□□□□ -0.85
PRKCH-222ENST00000556778 ADALQ6DHV7 355 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms