RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 hCG_1984214I3L0E3 225 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 INO80B-WBP1J3KQ70 363 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 AP3B1O00203 1094 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 ELL2O00472 640 aaPredicted RBP6.69□□□□□ -1.34
TDP1-215ENST00000556498 BIN1O00499 593 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 TRDMT1O14717 391 aaKnown RBP6.69□□□□□ -1.34
TDP1-215ENST00000556498 FSCN2O14926 492 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 KMOO15229 486 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 B4GALT4O60513 344 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 RANBP6O60518 1105 aaKnown RBP6.69□□□□□ -1.34
TDP1-215ENST00000556498 CELA3AP09093 270 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 ZSCAN22P10073 491 aaPredicted RBP6.69□□□□□ -1.34
TDP1-215ENST00000556498 PRKACBP22694 351 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 SFPQP23246 707 aaKnown RBP eCLIP6.69□□□□□ -1.34
TDP1-215ENST00000556498 RPL9P32969 192 aaKnown RBP6.69□□□□□ -1.34
TDP1-215ENST00000556498 LIFRP42702 1097 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 ZNF157P51786 506 aaPredicted RBP6.69□□□□□ -1.34
TDP1-215ENST00000556498 SSTP61278 116 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 SNRPNP63162 240 aaKnown RBP6.69□□□□□ -1.34
TDP1-215ENST00000556498 PIP4K2BP78356 416 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 CD83Q01151 205 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 PFKPQ01813 784 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 CYP4A11Q02928 519 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 GSTM4Q03013 218 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 BLMHQ13867 455 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 CRY1Q16526 586 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 CYP4A22Q5TCH4 519 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 TXNDC11Q6PKC3 985 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 IKBIPQ70UQ0 350 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 BZW1Q7L1Q6 419 aaKnown RBP6.69□□□□□ -1.34
TDP1-215ENST00000556498 VPS36Q86VN1 386 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 ANKRD53Q8N9V6 530 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.69□□□□□ -1.34
TDP1-215ENST00000556498 OTUD7AQ8TE49 926 aaPredicted RBP6.69□□□□□ -1.34
TDP1-215ENST00000556498 ATL1Q8WXF7 558 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 CASP10Q92851 521 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 FAM149B1Q96BN6 582 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 SGK3Q96BR1 496 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 DHX58Q96C10 678 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 INTS12Q96CB8 462 aaKnown RBP6.69□□□□□ -1.34
TDP1-215ENST00000556498 RBM18Q96H35 190 aaKnown RBP6.69□□□□□ -1.34
TDP1-215ENST00000556498 FNBP1Q96RU3 617 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 NELL2Q99435 816 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 TRIM56Q9BRZ2 755 aaKnown RBP6.69□□□□□ -1.34
TDP1-215ENST00000556498 TINF2Q9BSI4 451 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 HAUS8Q9BT25 410 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 ISCA1Q9BUE6 129 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 MIS12Q9H081 205 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 KCTD10Q9H3F6 313 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 DCTPP1Q9H773 170 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 ACAD9Q9H845 621 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 ACTR5Q9H9F9 607 aaPredicted RBP6.69□□□□□ -1.34
TDP1-215ENST00000556498 ST7Q9NRC1 585 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 KCND1Q9NSA2 647 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.69□□□□□ -1.34
TDP1-215ENST00000556498 SLC39A1Q9NY26 324 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 RTEL1Q9NZ71 1219 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 DDX20Q9UHI6 824 aaKnown RBP6.69□□□□□ -1.34
TDP1-215ENST00000556498 PFDN2Q9UHV9 154 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 GPN3Q9UHW5 284 aaPredicted RBP6.69□□□□□ -1.34
TDP1-215ENST00000556498 DNAI1Q9UI46 699 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 AGO2Q9UKV8 859 aaKnown RBP6.69□□□□□ -1.34
TDP1-215ENST00000556498 KIAA1257Q9ULG3 409 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 EXOC7Q9UPT5 735 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 MAGED1Q9Y5V3 778 aaPredicted RBP6.69□□□□□ -1.34
TDP1-215ENST00000556498 FAM169AQ9Y6X4 670 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 ZNF804BA4D1E1 1349 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 ZNF644Q9H582 1327 aaPredicted RBP6.69□□□□□ -1.34
TDP1-215ENST00000556498 ANKRD36BQ8N2N9 1353 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 NPATQ14207 1427 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 URB2Q14146 1524 aaKnown RBP6.68□□□□□ -1.34
TDP1-215ENST00000556498 C17orf113A0A1B0GUU1 675 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 KRBA1A5PL33 1030 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 CCDC169A6NNP5 214 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 GCOM1H8Y6P7 765 aaPredicted RBP6.68□□□□□ -1.34
TDP1-215ENST00000556498 APOL1O14791 398 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 TM4SF5O14894 197 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 FYB1O15117 783 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 BUB1BO60566 1050 aaPredicted RBP6.68□□□□□ -1.34
TDP1-215ENST00000556498 CDC45O75419 566 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 PAGE1O75459 146 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 TSPAN9O75954 239 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 FLOT1O75955 427 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 RASGRP1O95267 797 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 MYZAPP0CAP1 466 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 SCG2P13521 617 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 EEF2P13639 858 aaKnown RBP6.68□□□□□ -1.34
TDP1-215ENST00000556498 CPA3P15088 417 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 GLULP15104 373 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 EIF2S2P20042 333 aaKnown RBP6.68□□□□□ -1.34
TDP1-215ENST00000556498 M6PRP20645 277 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 MUTP22033 750 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 ANXA13P27216 316 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 MASP1P48740 699 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 LIG3P49916 1009 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 PDE6CP51160 858 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 CAP1Q01518 475 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 KLC1Q07866 573 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 KLHL30Q0D2K2 578 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 C19orf57Q0VDD7 668 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms