RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 AZI2Q9H6S1 392 aa11.36□□□□□ -0.59
SCFD1-220ENST00000556486 ANO2Q9NQ90 1003 aa11.36□□□□□ -0.59
SCFD1-220ENST00000556486 BARHL2Q9NY43 387 aa11.36□□□□□ -0.59
SCFD1-220ENST00000556486 DBR1Q9UK59 544 aaKnown RBP11.36□□□□□ -0.59
SCFD1-220ENST00000556486 ST3GAL5Q9UNP4 418 aa11.36□□□□□ -0.59
SCFD1-220ENST00000556486 KIAA1024Q9UPX6 916 aa11.36□□□□□ -0.59
SCFD1-220ENST00000556486 EP300Q09472 2414 aaPredicted RBP11.35□□□□□ -0.59
SCFD1-220ENST00000556486 C9IYK1 514 aa11.35□□□□□ -0.59
SCFD1-220ENST00000556486 DDX39AO00148 427 aaKnown RBP11.35□□□□□ -0.59
SCFD1-220ENST00000556486 CLASP2O75122 1294 aaKnown RBP11.35□□□□□ -0.59
SCFD1-220ENST00000556486 EPCAMP16422 314 aa11.35□□□□□ -0.59
SCFD1-220ENST00000556486 NPR3P17342 541 aa11.35□□□□□ -0.59
SCFD1-220ENST00000556486 HOXB8P17481 243 aaPredicted RBP11.35□□□□□ -0.59
SCFD1-220ENST00000556486 STAT5BP51692 787 aa11.35□□□□□ -0.59
SCFD1-220ENST00000556486 NAPAP54920 295 aa11.35□□□□□ -0.59
SCFD1-220ENST00000556486 SEC13P55735 322 aa11.35□□□□□ -0.59
SCFD1-220ENST00000556486 ITGB3BPQ13352 177 aaPredicted RBP11.35□□□□□ -0.59
SCFD1-220ENST00000556486 KIZQ2M2Z5 673 aa11.35□□□□□ -0.59
SCFD1-220ENST00000556486 KCNT2Q6UVM3 1135 aa11.35□□□□□ -0.59
SCFD1-220ENST00000556486 TMC5Q6UXY8 1006 aa11.35□□□□□ -0.59
SCFD1-220ENST00000556486 SYNE3Q6ZMZ3 975 aa11.35□□□□□ -0.59
SCFD1-220ENST00000556486 SLC24A5Q71RS6 500 aa11.35□□□□□ -0.59
SCFD1-220ENST00000556486 DHX32Q7L7V1 743 aaKnown RBP11.35□□□□□ -0.59
SCFD1-220ENST00000556486 TAS1R3Q7RTX0 852 aa11.35□□□□□ -0.59
SCFD1-220ENST00000556486 CYP2W1Q8TAV3 490 aa11.35□□□□□ -0.59
SCFD1-220ENST00000556486 RASGRP4Q8TDF6 673 aa11.35□□□□□ -0.59
SCFD1-220ENST00000556486 ZNF668Q96K58 619 aaPredicted RBP11.35□□□□□ -0.59
SCFD1-220ENST00000556486 CASD1Q96PB1 797 aa11.35□□□□□ -0.59
SCFD1-220ENST00000556486 OSMRQ99650 979 aa11.35□□□□□ -0.59
SCFD1-220ENST00000556486 SDF4Q9BRK5 362 aa11.35□□□□□ -0.59
SCFD1-220ENST00000556486 LRRC2Q9BYS8 371 aa11.35□□□□□ -0.59
SCFD1-220ENST00000556486 ATP6V0A4Q9HBG4 840 aa11.35□□□□□ -0.59
SCFD1-220ENST00000556486 AGO4Q9HCK5 861 aaKnown RBP11.35□□□□□ -0.59
SCFD1-220ENST00000556486 RGS18Q9NS28 235 aa11.35□□□□□ -0.59
SCFD1-220ENST00000556486 EGFL7Q9UHF1 273 aa11.35□□□□□ -0.59
SCFD1-220ENST00000556486 PUF60Q9UHX1 559 aaKnown RBP11.35□□□□□ -0.59
SCFD1-220ENST00000556486 DOLKQ9UPQ8 538 aa11.35□□□□□ -0.59
SCFD1-220ENST00000556486 DENND4AQ7Z401 1863 aa11.35□□□□□ -0.59
SCFD1-220ENST00000556486 C2orf16Q68DN1 1984 aa11.35□□□□□ -0.59
SCFD1-220ENST00000556486 NCOR2Q9Y618 2525 aa11.35□□□□□ -0.59
SCFD1-220ENST00000556486 CACNA1BQ00975 2339 aa11.34□□□□□ -0.59
SCFD1-220ENST00000556486 COL1A2P08123 1366 aa11.34□□□□□ -0.59
SCFD1-220ENST00000556486 NID2Q14112 1375 aa11.34□□□□□ -0.59
SCFD1-220ENST00000556486 ESYT2A0FGR8 921 aa11.34□□□□□ -0.59
SCFD1-220ENST00000556486 C2orf71A6NGG8 1288 aa11.34□□□□□ -0.59
SCFD1-220ENST00000556486 ZBTB43O43298 467 aa11.34□□□□□ -0.59
SCFD1-220ENST00000556486 NARSO43776 548 aaKnown RBP11.34□□□□□ -0.59
SCFD1-220ENST00000556486 VTNP04004 478 aa11.34□□□□□ -0.59
SCFD1-220ENST00000556486 CYP3A4P08684 503 aa11.34□□□□□ -0.59
SCFD1-220ENST00000556486 AOC1P19801 751 aa11.34□□□□□ -0.59
SCFD1-220ENST00000556486 KLRC1P26715 233 aa11.34□□□□□ -0.59
SCFD1-220ENST00000556486 METAP2P50579 478 aaKnown RBP eCLIP11.34□□□□□ -0.59
SCFD1-220ENST00000556486 CLCN5P51795 746 aa11.34□□□□□ -0.59
SCFD1-220ENST00000556486 ADCY7P51828 1080 aa11.34□□□□□ -0.59
SCFD1-220ENST00000556486 RTN1Q16799 776 aa11.34□□□□□ -0.59
SCFD1-220ENST00000556486 PDE12Q6L8Q7 609 aaKnown RBP11.34□□□□□ -0.59
SCFD1-220ENST00000556486 ABHD15Q6UXT9 468 aa11.34□□□□□ -0.59
SCFD1-220ENST00000556486 FAM228AQ86W67 206 aa11.34□□□□□ -0.59
SCFD1-220ENST00000556486 CCDC105Q8IYK2 499 aa11.34□□□□□ -0.59
SCFD1-220ENST00000556486 DCLK2Q8N568 766 aa11.34□□□□□ -0.59
SCFD1-220ENST00000556486 FAM160A2Q8N612 972 aaPredicted RBP11.34□□□□□ -0.59
SCFD1-220ENST00000556486 DTWD2Q8NBA8 298 aa11.34□□□□□ -0.59
SCFD1-220ENST00000556486 PGBD1Q96JS3 809 aa11.34□□□□□ -0.59
SCFD1-220ENST00000556486 ZNF558Q96NG5 402 aa11.34□□□□□ -0.59
SCFD1-220ENST00000556486 ANO3Q9BYT9 981 aa11.34□□□□□ -0.59
SCFD1-220ENST00000556486 NGRNQ9NPE2 291 aaKnown RBP11.34□□□□□ -0.59
SCFD1-220ENST00000556486 RNF19AQ9NV58 838 aa11.34□□□□□ -0.59
SCFD1-220ENST00000556486 FBXL21Q9UKT6 434 aa11.34□□□□□ -0.59
SCFD1-220ENST00000556486 BRPF3Q9ULD4 1205 aa11.34□□□□□ -0.59
SCFD1-220ENST00000556486 ZFHX4Q86UP3 3567 aa11.33□□□□□ -0.6
SCFD1-220ENST00000556486 KMT2BQ9UMN6 2715 aaPredicted RBP11.33□□□□□ -0.6
SCFD1-220ENST00000556486 IGLV3-22A0A075B6J6 115 aa11.33□□□□□ -0.6
SCFD1-220ENST00000556486 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.33□□□□□ -0.6
SCFD1-220ENST00000556486 FSD2A1L4K1 749 aa11.33□□□□□ -0.6
SCFD1-220ENST00000556486 DHX15O43143 795 aaKnown RBP11.33□□□□□ -0.6
SCFD1-220ENST00000556486 HBP1O60381 514 aa11.33□□□□□ -0.6
SCFD1-220ENST00000556486 CCNE2O96020 404 aa11.33□□□□□ -0.6
SCFD1-220ENST00000556486 ABL1P00519 1130 aa11.33□□□□□ -0.6
SCFD1-220ENST00000556486 HMGB1P09429 215 aaKnown RBP11.33□□□□□ -0.6
SCFD1-220ENST00000556486 MYBP10242 640 aa11.33□□□□□ -0.6
SCFD1-220ENST00000556486 MTHFRP42898 656 aa11.33□□□□□ -0.6
SCFD1-220ENST00000556486 MMP16P51512 607 aa11.33□□□□□ -0.6
SCFD1-220ENST00000556486 PLCB3Q01970 1234 aa11.33□□□□□ -0.6
SCFD1-220ENST00000556486 ITIH3Q06033 890 aa11.33□□□□□ -0.6
SCFD1-220ENST00000556486 KRT32Q14532 448 aa11.33□□□□□ -0.6
SCFD1-220ENST00000556486 SMC1AQ14683 1233 aaKnown RBP11.33□□□□□ -0.6
SCFD1-220ENST00000556486 OCLNQ16625 522 aa11.33□□□□□ -0.6
SCFD1-220ENST00000556486 LONRF3Q496Y0 759 aa11.33□□□□□ -0.6
SCFD1-220ENST00000556486 OXLD1Q5BKU9 147 aa11.33□□□□□ -0.6
SCFD1-220ENST00000556486 SPECC1Q5M775 1068 aa11.33□□□□□ -0.6
SCFD1-220ENST00000556486 RAB11FIP4Q86YS3 637 aa11.33□□□□□ -0.6
SCFD1-220ENST00000556486 KIAA0319LQ8IZA0 1049 aa11.33□□□□□ -0.6
SCFD1-220ENST00000556486 FBXL16Q8N461 479 aa11.33□□□□□ -0.6
SCFD1-220ENST00000556486 ST13P5Q8NFI4 369 aaPredicted RBP11.33□□□□□ -0.6
SCFD1-220ENST00000556486 PRIMPOLQ96LW4 560 aa11.33□□□□□ -0.6
SCFD1-220ENST00000556486 NECTIN4Q96NY8 510 aa11.33□□□□□ -0.6
SCFD1-220ENST00000556486 C1orf112Q9NSG2 853 aa11.33□□□□□ -0.6
SCFD1-220ENST00000556486 TMEM161AQ9NX61 479 aa11.33□□□□□ -0.6
SCFD1-220ENST00000556486 SPG21Q9NZD8 308 aa11.33□□□□□ -0.6
SCFD1-220ENST00000556486 LZTS1Q9Y250 596 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms