RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 C1orf112Q9NSG2 853 aa8.4□□□□□ -1.06
TDP1-214ENST00000556063 ARHGAP28Q9P2N2 729 aa8.4□□□□□ -1.06
TDP1-214ENST00000556063 PADI3Q9ULW8 664 aa8.4□□□□□ -1.06
TDP1-214ENST00000556063 ST3GAL5Q9UNP4 418 aa8.4□□□□□ -1.06
TDP1-214ENST00000556063 SCN5AQ14524 2016 aa8.4□□□□□ -1.06
TDP1-214ENST00000556063 UBE4BO95155 1302 aa8.39□□□□□ -1.07
TDP1-214ENST00000556063 C19orf67A6NJJ6 358 aa8.39□□□□□ -1.07
TDP1-214ENST00000556063 H0YGN5 161 aa8.39□□□□□ -1.07
TDP1-214ENST00000556063 N4BP3O15049 544 aa8.39□□□□□ -1.07
TDP1-214ENST00000556063 EIF3DO15371 548 aaKnown RBP eCLIP8.39□□□□□ -1.07
TDP1-214ENST00000556063 BAIAP3O94812 1187 aa8.39□□□□□ -1.07
TDP1-214ENST00000556063 RHOBTB3O94955 611 aa8.39□□□□□ -1.07
TDP1-214ENST00000556063 PRR29P0C7W0 189 aa8.39□□□□□ -1.07
TDP1-214ENST00000556063 CASP1P29466 404 aa8.39□□□□□ -1.07
TDP1-214ENST00000556063 PPP1R2P41236 205 aa8.39□□□□□ -1.07
TDP1-214ENST00000556063 MAGEA10P43363 369 aaPredicted RBP8.39□□□□□ -1.07
TDP1-214ENST00000556063 KCNJ6P48051 423 aa8.39□□□□□ -1.07
TDP1-214ENST00000556063 RAB27AP51159 221 aa8.39□□□□□ -1.07
TDP1-214ENST00000556063 GTF2BQ00403 316 aa8.39□□□□□ -1.07
TDP1-214ENST00000556063 MBTD1Q05BQ5 628 aa8.39□□□□□ -1.07
TDP1-214ENST00000556063 PNOCQ13519 176 aa8.39□□□□□ -1.07
TDP1-214ENST00000556063 STIM1Q13586 685 aa8.39□□□□□ -1.07
TDP1-214ENST00000556063 HSP90AA2PQ14568 343 aaPredicted RBP8.39□□□□□ -1.07
TDP1-214ENST00000556063 MBTPS1Q14703 1052 aa8.39□□□□□ -1.07
TDP1-214ENST00000556063 KMT5BQ4FZB7 885 aa8.39□□□□□ -1.07
TDP1-214ENST00000556063 TWF2Q6IBS0 349 aaKnown RBP8.39□□□□□ -1.07
TDP1-214ENST00000556063 NOTUMQ6P988 496 aa8.39□□□□□ -1.07
TDP1-214ENST00000556063 ZPBP2Q6X784 338 aa8.39□□□□□ -1.07
TDP1-214ENST00000556063 HACE1Q8IYU2 909 aa8.39□□□□□ -1.07
TDP1-214ENST00000556063 SYCP3Q8IZU3 236 aa8.39□□□□□ -1.07
TDP1-214ENST00000556063 TRIML1Q8N9V2 468 aa8.39□□□□□ -1.07
TDP1-214ENST00000556063 TMEM161BQ8NDZ6 487 aa8.39□□□□□ -1.07
TDP1-214ENST00000556063 BICD1Q96G01 975 aa8.39□□□□□ -1.07
TDP1-214ENST00000556063 ACCSQ96QU6 501 aa8.39□□□□□ -1.07
TDP1-214ENST00000556063 TCHPQ9BT92 498 aa8.39□□□□□ -1.07
TDP1-214ENST00000556063 KIFC3Q9BVG8 833 aa8.39□□□□□ -1.07
TDP1-214ENST00000556063 TMEM206Q9H813 350 aa8.39□□□□□ -1.07
TDP1-214ENST00000556063 AGPAT5Q9NUQ2 364 aa8.39□□□□□ -1.07
TDP1-214ENST00000556063 TBC1D7Q9P0N9 293 aa8.39□□□□□ -1.07
TDP1-214ENST00000556063 TBX20Q9UMR3 447 aa8.39□□□□□ -1.07
TDP1-214ENST00000556063 PIN4Q9Y237 131 aaKnown RBP8.39□□□□□ -1.07
TDP1-214ENST00000556063 PCDHA5Q9Y5H7 936 aa8.39□□□□□ -1.07
TDP1-214ENST00000556063 CENPFP49454 3210 aa8.38□□□□□ -1.07
TDP1-214ENST00000556063 ADGRA3Q8IWK6 1321 aa8.38□□□□□ -1.07
TDP1-214ENST00000556063 CNTNAP2Q9UHC6 1331 aa8.38□□□□□ -1.07
TDP1-214ENST00000556063 KLRC4O43908 158 aa8.38□□□□□ -1.07
TDP1-214ENST00000556063 TSPAN1O60635 241 aa8.38□□□□□ -1.07
TDP1-214ENST00000556063 CSDE1O75534 798 aaKnown RBP8.38□□□□□ -1.07
TDP1-214ENST00000556063 AMHP03971 560 aa8.38□□□□□ -1.07
TDP1-214ENST00000556063 STAG3L1P0CL83 205 aa8.38□□□□□ -1.07
TDP1-214ENST00000556063 ACRP10323 421 aa8.38□□□□□ -1.07
TDP1-214ENST00000556063 ARF4P18085 180 aaPredicted RBP8.38□□□□□ -1.07
TDP1-214ENST00000556063 NMT1P30419 496 aaKnown RBP8.38□□□□□ -1.07
TDP1-214ENST00000556063 MATR3P43243 847 aaKnown RBP eCLIP8.38□□□□□ -1.07
TDP1-214ENST00000556063 LIG4P49917 911 aa8.38□□□□□ -1.07
TDP1-214ENST00000556063 EHHADHQ08426 723 aa8.38□□□□□ -1.07
TDP1-214ENST00000556063 CAMK4Q16566 473 aa8.38□□□□□ -1.07
TDP1-214ENST00000556063 KLHL40Q2TBA0 621 aa8.38□□□□□ -1.07
TDP1-214ENST00000556063 CCDC183Q5T5S1 534 aa8.38□□□□□ -1.07
TDP1-214ENST00000556063 ATF7IP2Q5U623 682 aa8.38□□□□□ -1.07
TDP1-214ENST00000556063 SLFN12LQ6IEE8 588 aa8.38□□□□□ -1.07
TDP1-214ENST00000556063 ZNF365Q70YC5 407 aa8.38□□□□□ -1.07
TDP1-214ENST00000556063 SLC24A5Q71RS6 500 aa8.38□□□□□ -1.07
TDP1-214ENST00000556063 HS2ST1Q7LGA3 356 aa8.38□□□□□ -1.07
TDP1-214ENST00000556063 GOLGA5Q8TBA6 731 aa8.38□□□□□ -1.07
TDP1-214ENST00000556063 GPT2Q8TD30 523 aa8.38□□□□□ -1.07
TDP1-214ENST00000556063 ADAM2Q99965 735 aa8.38□□□□□ -1.07
TDP1-214ENST00000556063 TRIM6Q9C030 488 aaPredicted RBP8.38□□□□□ -1.07
TDP1-214ENST00000556063 UBE2OQ9C0C9 1292 aaKnown RBP8.38□□□□□ -1.07
TDP1-214ENST00000556063 CCDC113Q9H0I3 377 aa8.38□□□□□ -1.07
TDP1-214ENST00000556063 MINDY3Q9H8M7 445 aa8.38□□□□□ -1.07
TDP1-214ENST00000556063 SLC39A2Q9NP94 309 aa8.38□□□□□ -1.07
TDP1-214ENST00000556063 KIAA1468Q9P260 1216 aa8.38□□□□□ -1.07
TDP1-214ENST00000556063 TNFSF13BQ9Y275 285 aa8.38□□□□□ -1.07
TDP1-214ENST00000556063 LTBP2Q14767 1821 aa8.38□□□□□ -1.07
TDP1-214ENST00000556063 TTC3P53804 2025 aa8.37□□□□□ -1.07
TDP1-214ENST00000556063 A0A1B0GUA9 196 aa8.37□□□□□ -1.07
TDP1-214ENST00000556063 ZBBXA8MT70 800 aa8.37□□□□□ -1.07
TDP1-214ENST00000556063 HNRNPDLO14979 420 aaKnown RBP8.37□□□□□ -1.07
TDP1-214ENST00000556063 TOM1L1O75674 476 aa8.37□□□□□ -1.07
TDP1-214ENST00000556063 PPP1R37O75864 691 aa8.37□□□□□ -1.07
TDP1-214ENST00000556063 PRPF6O94906 941 aaKnown RBP8.37□□□□□ -1.07
TDP1-214ENST00000556063 LETM1O95202 739 aaPredicted RBP8.37□□□□□ -1.07
TDP1-214ENST00000556063 FGFR4P22455 802 aa8.37□□□□□ -1.07
TDP1-214ENST00000556063 BMP8BP34820 402 aa8.37□□□□□ -1.07
TDP1-214ENST00000556063 SARSP49591 514 aaKnown RBP8.37□□□□□ -1.07
TDP1-214ENST00000556063 SNRPFP62306 86 aaKnown RBP8.37□□□□□ -1.07
TDP1-214ENST00000556063 GPNMBQ14956 572 aa8.37□□□□□ -1.07
TDP1-214ENST00000556063 KYAT1Q16773 422 aa8.37□□□□□ -1.07
TDP1-214ENST00000556063 DCAF4L1Q3SXM0 396 aa8.37□□□□□ -1.07
TDP1-214ENST00000556063 ZNF568Q3ZCX4 644 aa8.37□□□□□ -1.07
TDP1-214ENST00000556063 ZC2HC1CQ53FD0 456 aaPredicted RBP8.37□□□□□ -1.07
TDP1-214ENST00000556063 TMEM240Q5SV17 173 aa8.37□□□□□ -1.07
TDP1-214ENST00000556063 L1TD1Q5T7N2 865 aaKnown RBP8.37□□□□□ -1.07
TDP1-214ENST00000556063 NT5DC1Q5TFE4 455 aa8.37□□□□□ -1.07
TDP1-214ENST00000556063 ZNF658Q5TYW1 1059 aaPredicted RBP8.37□□□□□ -1.07
TDP1-214ENST00000556063 SLC27A1Q6PCB7 646 aa8.37□□□□□ -1.07
TDP1-214ENST00000556063 OTOP2Q7RTS6 562 aa8.37□□□□□ -1.07
TDP1-214ENST00000556063 MAP4K3Q8IVH8 894 aa8.37□□□□□ -1.07
TDP1-214ENST00000556063 MYOCDQ8IZQ8 938 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms