RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 SLC27A1Q6PCB7 646 aa25.24■■□□□ 1.63
CDKN3-208ENST00000555837 RAD54LQ92698 747 aa25.24■■□□□ 1.63
CDKN3-208ENST00000555837 SYMPKQ92797 1274 aaKnown RBP25.24■■□□□ 1.63
CDKN3-208ENST00000555837 PLIN2Q99541 437 aa25.24■■□□□ 1.63
CDKN3-208ENST00000555837 C17orf80Q9BSJ5 609 aa25.24■■□□□ 1.63
CDKN3-208ENST00000555837 FZD8Q9H461 694 aa25.24■■□□□ 1.63
CDKN3-208ENST00000555837 KMT5AQ9NQR1 393 aa25.24■■□□□ 1.63
CDKN3-208ENST00000555837 ACKR2O00590 384 aa25.23■■□□□ 1.63
CDKN3-208ENST00000555837 HOXA11P31270 313 aaPredicted RBP25.23■■□□□ 1.63
CDKN3-208ENST00000555837 GPM6BQ13491 265 aa25.23■■□□□ 1.63
CDKN3-208ENST00000555837 PAN2Q504Q3 1202 aaKnown RBP25.23■■□□□ 1.63
CDKN3-208ENST00000555837 FOXD4L5Q5VV16 416 aaPredicted RBP25.23■■□□□ 1.63
CDKN3-208ENST00000555837 ZNF598Q86UK7 904 aaKnown RBP25.23■■□□□ 1.63
CDKN3-208ENST00000555837 SPIRE2Q8WWL2 714 aa25.23■■□□□ 1.63
CDKN3-208ENST00000555837 FOXD4L4Q8WXT5 416 aaPredicted RBP25.23■■□□□ 1.63
CDKN3-208ENST00000555837 TMEM134Q9H6X4 195 aa25.23■■□□□ 1.63
CDKN3-208ENST00000555837 TFIP11Q9UBB9 837 aaKnown RBP25.23■■□□□ 1.63
CDKN3-208ENST00000555837 RALGAPA2Q2PPJ7 1873 aa25.23■■□□□ 1.63
CDKN3-208ENST00000555837 A0A1B0GUA9 196 aa25.22■■□□□ 1.63
CDKN3-208ENST00000555837 BRD1O95696 1058 aa25.22■■□□□ 1.63
CDKN3-208ENST00000555837 PRKCBP05771 671 aa25.22■■□□□ 1.63
CDKN3-208ENST00000555837 PLS3P13797 630 aa25.22■■□□□ 1.63
CDKN3-208ENST00000555837 NCLP19338 710 aaKnown RBP25.22■■□□□ 1.63
CDKN3-208ENST00000555837 PPM1AP35813 382 aa25.22■■□□□ 1.63
CDKN3-208ENST00000555837 PEX3P56589 373 aa25.22■■□□□ 1.63
CDKN3-208ENST00000555837 KRT85P78386 507 aa25.22■■□□□ 1.63
CDKN3-208ENST00000555837 NUCB2P80303 420 aa25.22■■□□□ 1.63
CDKN3-208ENST00000555837 STRN3Q13033 797 aa25.22■■□□□ 1.63
CDKN3-208ENST00000555837 SV2BQ7L1I2 683 aa25.22■■□□□ 1.63
CDKN3-208ENST00000555837 KCNK18Q7Z418 384 aa25.22■■□□□ 1.63
CDKN3-208ENST00000555837 MRPL10Q7Z7H8 261 aaKnown RBP25.22■■□□□ 1.63
CDKN3-208ENST00000555837 GPBP1Q86WP2 473 aa25.22■■□□□ 1.63
CDKN3-208ENST00000555837 PPP2R3CQ969Q6 453 aa25.22■■□□□ 1.63
CDKN3-208ENST00000555837 EPSTI1Q96J88 318 aa25.22■■□□□ 1.63
CDKN3-208ENST00000555837 NTPCRQ9BSD7 190 aaKnown RBP25.22■■□□□ 1.63
CDKN3-208ENST00000555837 RUSC1Q9BVN2 902 aa25.22■■□□□ 1.63
CDKN3-208ENST00000555837 CUEDC2Q9H467 287 aa25.22■■□□□ 1.63
CDKN3-208ENST00000555837 MRPL42Q9Y6G3 142 aaKnown RBP25.22■■□□□ 1.63
CDKN3-208ENST00000555837 TBCAO75347 108 aaKnown RBP25.21■■□□□ 1.63
CDKN3-208ENST00000555837 FGFR1P11362 822 aa25.21■■□□□ 1.63
CDKN3-208ENST00000555837 ITGA4P13612 1032 aa25.21■■□□□ 1.63
CDKN3-208ENST00000555837 ARF4P18085 180 aaPredicted RBP25.21■■□□□ 1.63
CDKN3-208ENST00000555837 STAT6P42226 847 aa25.21■■□□□ 1.63
CDKN3-208ENST00000555837 ME1P48163 572 aa25.21■■□□□ 1.63
CDKN3-208ENST00000555837 FAM13BQ9NYF5 915 aa25.21■■□□□ 1.63
CDKN3-208ENST00000555837 STK39Q9UEW8 545 aa25.21■■□□□ 1.63
CDKN3-208ENST00000555837 ZMYM2Q9UBW7 1377 aa25.2■■□□□ 1.63
CDKN3-208ENST00000555837 MYO9BQ13459 2157 aa25.2■■□□□ 1.62
CDKN3-208ENST00000555837 FAM13AO94988 1023 aa25.2■■□□□ 1.62
CDKN3-208ENST00000555837 ARHGEF15O94989 841 aa25.2■■□□□ 1.62
CDKN3-208ENST00000555837 NPTX2P47972 431 aa25.2■■□□□ 1.62
CDKN3-208ENST00000555837 UBE3AQ05086 875 aa25.2■■□□□ 1.62
CDKN3-208ENST00000555837 GRIN1Q05586 938 aa25.2■■□□□ 1.62
CDKN3-208ENST00000555837 BMS1Q14692 1282 aaKnown RBP25.2■■□□□ 1.62
CDKN3-208ENST00000555837 TIGD5Q53EQ6 642 aa25.2■■□□□ 1.62
CDKN3-208ENST00000555837 MRPL38Q96DV4 380 aaKnown RBP25.2■■□□□ 1.62
CDKN3-208ENST00000555837 CASD1Q96PB1 797 aa25.2■■□□□ 1.62
CDKN3-208ENST00000555837 RSAD1Q9HA92 442 aa25.2■■□□□ 1.62
CDKN3-208ENST00000555837 PARVGQ9HBI0 331 aa25.2■■□□□ 1.62
CDKN3-208ENST00000555837 PUF60Q9UHX1 559 aaKnown RBP25.2■■□□□ 1.62
CDKN3-208ENST00000555837 ALDH7A1P49419 539 aaKnown RBP25.19■■□□□ 1.62
CDKN3-208ENST00000555837 AMPD3Q01432 767 aa25.19■■□□□ 1.62
CDKN3-208ENST00000555837 KRT17Q04695 432 aa25.19■■□□□ 1.62
CDKN3-208ENST00000555837 RNASELQ05823 741 aaKnown RBP25.19■■□□□ 1.62
CDKN3-208ENST00000555837 AMHR2Q16671 573 aa25.19■■□□□ 1.62
CDKN3-208ENST00000555837 DCAF4L1Q3SXM0 396 aa25.19■■□□□ 1.62
CDKN3-208ENST00000555837 NOMO2Q5JPE7 1267 aa25.19■■□□□ 1.62
CDKN3-208ENST00000555837 CLIC6Q96NY7 704 aa25.19■■□□□ 1.62
CDKN3-208ENST00000555837 FAM193BQ96PV7 902 aaPredicted RBP25.19■■□□□ 1.62
CDKN3-208ENST00000555837 MRPL4Q9BYD3 311 aaKnown RBP25.19■■□□□ 1.62
CDKN3-208ENST00000555837 SCAND2PQ9GZW5 306 aaPredicted RBP25.19■■□□□ 1.62
CDKN3-208ENST00000555837 TYW1Q9NV66 732 aaKnown RBP25.19■■□□□ 1.62
CDKN3-208ENST00000555837 GIT1Q9Y2X7 761 aa25.19■■□□□ 1.62
CDKN3-208ENST00000555837 MTCH2Q9Y6C9 303 aa25.19■■□□□ 1.62
CDKN3-208ENST00000555837 MYH15Q9Y2K3 1946 aa25.19■■□□□ 1.62
CDKN3-208ENST00000555837 NR1I2O75469 434 aa25.18■■□□□ 1.62
CDKN3-208ENST00000555837 DHX8Q14562 1220 aaKnown RBP25.18■■□□□ 1.62
CDKN3-208ENST00000555837 SPECC1Q5M775 1068 aa25.18■■□□□ 1.62
CDKN3-208ENST00000555837 IQUBQ8NA54 791 aa25.18■■□□□ 1.62
CDKN3-208ENST00000555837 HELQQ8TDG4 1101 aa25.18■■□□□ 1.62
CDKN3-208ENST00000555837 GDPD5Q8WTR4 605 aa25.18■■□□□ 1.62
CDKN3-208ENST00000555837 BSNDQ8WZ55 320 aa25.18■■□□□ 1.62
CDKN3-208ENST00000555837 CPB2Q96IY4 423 aa25.18■■□□□ 1.62
CDKN3-208ENST00000555837 ZNF558Q96NG5 402 aa25.18■■□□□ 1.62
CDKN3-208ENST00000555837 BLOC1S4Q9NUP1 217 aa25.18■■□□□ 1.62
CDKN3-208ENST00000555837 ARHGAP28Q9P2N2 729 aa25.18■■□□□ 1.62
CDKN3-208ENST00000555837 NCK2O43639 380 aa25.17■■□□□ 1.62
CDKN3-208ENST00000555837 LIG1P18858 919 aa25.17■■□□□ 1.62
CDKN3-208ENST00000555837 ADGRE1Q14246 886 aa25.17■■□□□ 1.62
CDKN3-208ENST00000555837 MCM6Q14566 821 aa25.17■■□□□ 1.62
CDKN3-208ENST00000555837 PDE12Q6L8Q7 609 aaKnown RBP25.17■■□□□ 1.62
CDKN3-208ENST00000555837 THNSL1Q8IYQ7 743 aa25.17■■□□□ 1.62
CDKN3-208ENST00000555837 CCDC113Q9H0I3 377 aa25.17■■□□□ 1.62
CDKN3-208ENST00000555837 MAGEF1Q9HAY2 307 aa25.17■■□□□ 1.62
CDKN3-208ENST00000555837 RCOR1Q9UKL0 485 aa25.17■■□□□ 1.62
CDKN3-208ENST00000555837 IPPQ9Y573 584 aa25.17■■□□□ 1.62
CDKN3-208ENST00000555837 FSD2A1L4K1 749 aa25.16■■□□□ 1.62
CDKN3-208ENST00000555837 ATF7P17544 494 aaPredicted RBP25.16■■□□□ 1.62
CDKN3-208ENST00000555837 DNM1Q05193 864 aaKnown RBP25.16■■□□□ 1.62
CDKN3-208ENST00000555837 RAD51AP2Q09MP3 1159 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms