RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 ASCC2Q9H1I8 757 aaPredicted RBP18.6■□□□□ 0.57
SYNE3-204ENST00000555759 ZWILCHQ9H900 591 aa18.6■□□□□ 0.57
SYNE3-204ENST00000555759 AGPAT5Q9NUQ2 364 aa18.6■□□□□ 0.57
SYNE3-204ENST00000555759 GINS2Q9Y248 185 aa18.6■□□□□ 0.57
SYNE3-204ENST00000555759 TRPM1Q7Z4N2 1603 aa18.6■□□□□ 0.57
SYNE3-204ENST00000555759 C16orf96A6NNT2 1141 aa18.6■□□□□ 0.57
SYNE3-204ENST00000555759 ALAS1P13196 640 aa18.6■□□□□ 0.57
SYNE3-204ENST00000555759 HIF1AQ16665 826 aa18.6■□□□□ 0.57
SYNE3-204ENST00000555759 PPP1R18Q6NYC8 613 aa18.6■□□□□ 0.57
SYNE3-204ENST00000555759 JAMLQ86YT9 394 aa18.6■□□□□ 0.57
SYNE3-204ENST00000555759 LRRC34Q8IZ02 419 aa18.6■□□□□ 0.57
SYNE3-204ENST00000555759 XXYLT1Q8NBI6 393 aa18.6■□□□□ 0.57
SYNE3-204ENST00000555759 CAVIN3Q969G5 261 aa18.6■□□□□ 0.57
SYNE3-204ENST00000555759 DCLRE1BQ9H816 532 aa18.6■□□□□ 0.57
SYNE3-204ENST00000555759 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.6■□□□□ 0.57
SYNE3-204ENST00000555759 KRT7P08729 469 aa18.6■□□□□ 0.57
SYNE3-204ENST00000555759 IGBP1P78318 339 aa18.6■□□□□ 0.57
SYNE3-204ENST00000555759 TRIP10Q15642 601 aa18.6■□□□□ 0.57
SYNE3-204ENST00000555759 ZCWPW2Q504Y3 356 aa18.6■□□□□ 0.57
SYNE3-204ENST00000555759 TRIM72Q6ZMU5 477 aa18.6■□□□□ 0.57
SYNE3-204ENST00000555759 PALLDQ8WX93 1383 aa18.6■□□□□ 0.57
SYNE3-204ENST00000555759 H0Y626 953 aa18.6■□□□□ 0.57
SYNE3-204ENST00000555759 TRIM16O95361 564 aa18.6■□□□□ 0.57
SYNE3-204ENST00000555759 CCDC159P0C7I6 412 aa18.6■□□□□ 0.57
SYNE3-204ENST00000555759 OR6B2Q6IFH4 312 aa18.6■□□□□ 0.57
SYNE3-204ENST00000555759 BBS5Q8N3I7 341 aa18.6■□□□□ 0.57
SYNE3-204ENST00000555759 SCG3Q8WXD2 468 aaKnown RBP18.6■□□□□ 0.57
SYNE3-204ENST00000555759 JDP2Q8WYK2 163 aa18.6■□□□□ 0.57
SYNE3-204ENST00000555759 VPS11Q9H270 941 aa18.6■□□□□ 0.57
SYNE3-204ENST00000555759 ORC4O43929 436 aa18.6■□□□□ 0.57
SYNE3-204ENST00000555759 FAM160B1Q5W0V3 765 aa18.6■□□□□ 0.57
SYNE3-204ENST00000555759 ENOSF1Q7L5Y1 443 aa18.6■□□□□ 0.57
SYNE3-204ENST00000555759 C1orf54Q8WWF1 131 aa18.6■□□□□ 0.57
SYNE3-204ENST00000555759 ANO3Q9BYT9 981 aa18.6■□□□□ 0.57
SYNE3-204ENST00000555759 KIAA1586Q9HCI6 787 aa18.6■□□□□ 0.57
SYNE3-204ENST00000555759 GOLGA8MH3BSY2 632 aa18.59■□□□□ 0.57
SYNE3-204ENST00000555759 AARSP49588 968 aaKnown RBP eCLIP18.59■□□□□ 0.57
SYNE3-204ENST00000555759 SLC7A3Q8WY07 619 aa18.59■□□□□ 0.57
SYNE3-204ENST00000555759 GID8Q9NWU2 228 aa18.59■□□□□ 0.57
SYNE3-204ENST00000555759 LZTS1Q9Y250 596 aa18.59■□□□□ 0.57
SYNE3-204ENST00000555759 ZNF804BA4D1E1 1349 aa18.59■□□□□ 0.57
SYNE3-204ENST00000555759 CPDO75976 1380 aa18.59■□□□□ 0.57
SYNE3-204ENST00000555759 SYF2O95926 243 aaKnown RBP18.59■□□□□ 0.57
SYNE3-204ENST00000555759 GTF2IP78347 998 aa18.59■□□□□ 0.57
SYNE3-204ENST00000555759 KIF22Q14807 665 aa18.59■□□□□ 0.57
SYNE3-204ENST00000555759 CYFIP1Q7L576 1253 aa18.59■□□□□ 0.57
SYNE3-204ENST00000555759 NACA2Q9H009 215 aa18.59■□□□□ 0.57
SYNE3-204ENST00000555759 TLR3O15455 904 aaKnown RBP18.59■□□□□ 0.57
SYNE3-204ENST00000555759 RTN2O75298 545 aa18.59■□□□□ 0.57
SYNE3-204ENST00000555759 SUPT3HO75486 399 aa18.59■□□□□ 0.57
SYNE3-204ENST00000555759 MCAMP43121 646 aa18.59■□□□□ 0.57
SYNE3-204ENST00000555759 SLFN12LQ6IEE8 588 aa18.59■□□□□ 0.57
SYNE3-204ENST00000555759 USP17L2Q6R6M4 530 aa18.59■□□□□ 0.57
SYNE3-204ENST00000555759 CCDC90BQ9GZT6 254 aa18.59■□□□□ 0.57
SYNE3-204ENST00000555759 E9PMD0 336 aa18.59■□□□□ 0.57
SYNE3-204ENST00000555759 FSBPO95073 299 aa18.59■□□□□ 0.57
SYNE3-204ENST00000555759 C16orf89Q6UX73 402 aa18.59■□□□□ 0.57
SYNE3-204ENST00000555759 ARHGAP27Q6ZUM4 889 aa18.59■□□□□ 0.57
SYNE3-204ENST00000555759 ANKZF1Q9H8Y5 726 aa18.59■□□□□ 0.57
SYNE3-204ENST00000555759 B2RBV5 119 aa18.58■□□□□ 0.57
SYNE3-204ENST00000555759 PAMP19021 973 aa18.58■□□□□ 0.57
SYNE3-204ENST00000555759 ALDH18A1P54886 795 aaKnown RBP18.58■□□□□ 0.57
SYNE3-204ENST00000555759 ASNSD1Q9NWL6 643 aa18.58■□□□□ 0.57
SYNE3-204ENST00000555759 SUCLA2Q9P2R7 463 aaPredicted RBP18.58■□□□□ 0.57
SYNE3-204ENST00000555759 LDHAP00338 332 aaKnown RBP18.58■□□□□ 0.57
SYNE3-204ENST00000555759 USP11P51784 963 aa18.58■□□□□ 0.57
SYNE3-204ENST00000555759 INPP5AQ14642 412 aa18.58■□□□□ 0.57
SYNE3-204ENST00000555759 EXOC8Q8IYI6 725 aa18.58■□□□□ 0.57
SYNE3-204ENST00000555759 RNF25Q96BH1 459 aaPredicted RBP18.58■□□□□ 0.57
SYNE3-204ENST00000555759 AGPAT1Q99943 283 aa18.58■□□□□ 0.57
SYNE3-204ENST00000555759 KANSL2Q9H9L4 492 aa18.58■□□□□ 0.57
SYNE3-204ENST00000555759 UVRAGQ9P2Y5 699 aa18.58■□□□□ 0.57
SYNE3-204ENST00000555759 H3BRJ5 948 aa18.58■□□□□ 0.56
SYNE3-204ENST00000555759 SLC16A3O15427 465 aaKnown RBP18.58■□□□□ 0.56
SYNE3-204ENST00000555759 STRNO43815 780 aa18.58■□□□□ 0.56
SYNE3-204ENST00000555759 PDE5AO76074 875 aa18.58■□□□□ 0.56
SYNE3-204ENST00000555759 LRRC8BQ6P9F7 803 aa18.58■□□□□ 0.56
SYNE3-204ENST00000555759 OSBPL8Q9BZF1 889 aa18.58■□□□□ 0.56
SYNE3-204ENST00000555759 TRIM9Q9C026 710 aa18.58■□□□□ 0.56
SYNE3-204ENST00000555759 POLD4Q9HCU8 107 aa18.58■□□□□ 0.56
SYNE3-204ENST00000555759 KCND1Q9NSA2 647 aa18.58■□□□□ 0.56
SYNE3-204ENST00000555759 POTEMA6NI47 508 aa18.58■□□□□ 0.56
SYNE3-204ENST00000555759 ADCY3O60266 1144 aa18.58■□□□□ 0.56
SYNE3-204ENST00000555759 OATP04181 439 aa18.58■□□□□ 0.56
SYNE3-204ENST00000555759 RASGRF1Q13972 1273 aa18.58■□□□□ 0.56
SYNE3-204ENST00000555759 STOX1Q6ZVD7 989 aa18.58■□□□□ 0.56
SYNE3-204ENST00000555759 TMCO5AQ8N6Q1 288 aa18.58■□□□□ 0.56
SYNE3-204ENST00000555759 RBM15Q96T37 977 aaKnown RBP eCLIP18.58■□□□□ 0.56
SYNE3-204ENST00000555759 THTPAQ9BU02 230 aa18.58■□□□□ 0.56
SYNE3-204ENST00000555759 PABPC3Q9H361 631 aaKnown RBP18.58■□□□□ 0.56
SYNE3-204ENST00000555759 RHBDL2Q9NX52 303 aa18.58■□□□□ 0.56
SYNE3-204ENST00000555759 XPOTO43592 962 aaKnown RBP18.57■□□□□ 0.56
SYNE3-204ENST00000555759 FLOT2Q14254 428 aa18.57■□□□□ 0.56
SYNE3-204ENST00000555759 ANKS1AQ92625 1134 aa18.57■□□□□ 0.56
SYNE3-204ENST00000555759 ARL8AQ96BM9 186 aa18.57■□□□□ 0.56
SYNE3-204ENST00000555759 SEPT9Q9UHD8 586 aaPredicted RBP18.57■□□□□ 0.56
SYNE3-204ENST00000555759 UBE2SQ16763 222 aa18.57■□□□□ 0.56
SYNE3-204ENST00000555759 ABCB5Q2M3G0 1257 aa18.57■□□□□ 0.56
SYNE3-204ENST00000555759 HSPH1Q92598 858 aa18.57■□□□□ 0.56
SYNE3-204ENST00000555759 MTRQ99707 1265 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms