RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 UHRF1BP1Q6BDS2 1440 aa4.46□□□□□ -1.7
SRP54-209ENST00000555746 CUL7Q14999 1698 aa4.45□□□□□ -1.7
SRP54-209ENST00000555746 A0A1W2PR48 441 aa4.45□□□□□ -1.7
SRP54-209ENST00000555746 XPOTO43592 962 aaKnown RBP4.45□□□□□ -1.7
SRP54-209ENST00000555746 FSBPO95073 299 aa4.45□□□□□ -1.7
SRP54-209ENST00000555746 ZRANB2O95218 330 aaKnown RBP eCLIP4.45□□□□□ -1.7
SRP54-209ENST00000555746 OSMP13725 252 aa4.45□□□□□ -1.7
SRP54-209ENST00000555746 XPAP23025 273 aaPredicted RBP4.45□□□□□ -1.7
SRP54-209ENST00000555746 STAT5BP51692 787 aa4.45□□□□□ -1.7
SRP54-209ENST00000555746 MEF2AQ02078 507 aaPredicted RBP4.45□□□□□ -1.7
SRP54-209ENST00000555746 USP10Q14694 798 aaKnown RBP4.45□□□□□ -1.7
SRP54-209ENST00000555746 CLUL1Q15846 466 aa4.45□□□□□ -1.7
SRP54-209ENST00000555746 ADRM1Q16186 407 aa4.45□□□□□ -1.7
SRP54-209ENST00000555746 EFCAB2Q5VUJ9 269 aa4.45□□□□□ -1.7
SRP54-209ENST00000555746 UNC5BQ8IZJ1 945 aa4.45□□□□□ -1.7
SRP54-209ENST00000555746 GFM2Q969S9 779 aaKnown RBP4.45□□□□□ -1.7
SRP54-209ENST00000555746 LCORQ96JN0 433 aaPredicted RBP4.45□□□□□ -1.7
SRP54-209ENST00000555746 TOX2Q96NM4 488 aa4.45□□□□□ -1.7
SRP54-209ENST00000555746 NUP88Q99567 741 aaPredicted RBP4.45□□□□□ -1.7
SRP54-209ENST00000555746 LUC7LQ9NQ29 371 aaKnown RBP4.45□□□□□ -1.7
SRP54-209ENST00000555746 ZIM2Q9NZV7 527 aa4.45□□□□□ -1.7
SRP54-209ENST00000555746 TCEAL9Q9UHQ7 104 aa4.45□□□□□ -1.7
SRP54-209ENST00000555746 DNAI1Q9UI46 699 aa4.45□□□□□ -1.7
SRP54-209ENST00000555746 MAGEL2Q9UJ55 1249 aa4.45□□□□□ -1.7
SRP54-209ENST00000555746 INVSQ9Y283 1065 aa4.45□□□□□ -1.7
SRP54-209ENST00000555746 GIT1Q9Y2X7 761 aa4.45□□□□□ -1.7
SRP54-209ENST00000555746 LUC7L2Q9Y383 392 aaKnown RBP4.45□□□□□ -1.7
SRP54-209ENST00000555746 CTDP1Q9Y5B0 961 aaPredicted RBP4.45□□□□□ -1.7
SRP54-209ENST00000555746 LRP5O75197 1615 aa4.45□□□□□ -1.7
SRP54-209ENST00000555746 FER1L4A9Z1Z3 1794 aa4.45□□□□□ -1.7
SRP54-209ENST00000555746 MROH6A6NGR9 719 aa4.44□□□□□ -1.7
SRP54-209ENST00000555746 DBX1A6NMT0 343 aa4.44□□□□□ -1.7
SRP54-209ENST00000555746 TSPAN6O43657 245 aa4.44□□□□□ -1.7
SRP54-209ENST00000555746 NOBOXO60393 691 aa4.44□□□□□ -1.7
SRP54-209ENST00000555746 NDUFS2O75306 463 aa4.44□□□□□ -1.7
SRP54-209ENST00000555746 LY86O95711 162 aa4.44□□□□□ -1.7
SRP54-209ENST00000555746 ZNF888P0CJ79 500 aaPredicted RBP4.44□□□□□ -1.7
SRP54-209ENST00000555746 GAAP10253 952 aa4.44□□□□□ -1.7
SRP54-209ENST00000555746 ZSCAN20P17040 1043 aaPredicted RBP4.44□□□□□ -1.7
SRP54-209ENST00000555746 VCAM1P19320 739 aa4.44□□□□□ -1.7
SRP54-209ENST00000555746 C5AR1P21730 350 aa4.44□□□□□ -1.7
SRP54-209ENST00000555746 CFPP27918 469 aa4.44□□□□□ -1.7
SRP54-209ENST00000555746 WASP42768 502 aa4.44□□□□□ -1.7
SRP54-209ENST00000555746 ADKP55263 362 aaKnown RBP4.44□□□□□ -1.7
SRP54-209ENST00000555746 CDK17Q00537 523 aa4.44□□□□□ -1.7
SRP54-209ENST00000555746 CD69Q07108 199 aa4.44□□□□□ -1.7
SRP54-209ENST00000555746 MALLQ13021 153 aa4.44□□□□□ -1.7
SRP54-209ENST00000555746 PCOLCEQ15113 449 aa4.44□□□□□ -1.7
SRP54-209ENST00000555746 PPP2R5AQ15172 486 aa4.44□□□□□ -1.7
SRP54-209ENST00000555746 VMACQ2NL98 169 aa4.44□□□□□ -1.7
SRP54-209ENST00000555746 ZMAT1Q5H9K5 638 aa4.44□□□□□ -1.7
SRP54-209ENST00000555746 AGBL4Q5VU57 503 aa4.44□□□□□ -1.7
SRP54-209ENST00000555746 BTNL9Q6UXG8 535 aa4.44□□□□□ -1.7
SRP54-209ENST00000555746 CLEC14AQ86T13 490 aa4.44□□□□□ -1.7
SRP54-209ENST00000555746 RTKN2Q8IZC4 609 aa4.44□□□□□ -1.7
SRP54-209ENST00000555746 ACE2Q9BYF1 805 aaPredicted RBP4.44□□□□□ -1.7
SRP54-209ENST00000555746 CHPF2Q9P2E5 772 aa4.44□□□□□ -1.7
SRP54-209ENST00000555746 TUBD1Q9UJT1 453 aa4.44□□□□□ -1.7
SRP54-209ENST00000555746 PNMA8BQ9ULN7 279 aaPredicted RBP4.44□□□□□ -1.7
SRP54-209ENST00000555746 ANKRD6Q9Y2G4 727 aa4.44□□□□□ -1.7
SRP54-209ENST00000555746 PTPRKQ15262 1439 aa4.44□□□□□ -1.7
SRP54-209ENST00000555746 NCOA1Q15788 1441 aa4.44□□□□□ -1.7
SRP54-209ENST00000555746 CD109Q6YHK3 1445 aa4.44□□□□□ -1.7
SRP54-209ENST00000555746 POGZQ7Z3K3 1410 aa4.44□□□□□ -1.7
SRP54-209ENST00000555746 FGD5Q6ZNL6 1462 aa4.43□□□□□ -1.7
SRP54-209ENST00000555746 BTBD11A6QL63 1104 aa4.43□□□□□ -1.7
SRP54-209ENST00000555746 TMEM127O75204 238 aa4.43□□□□□ -1.7
SRP54-209ENST00000555746 SCGB1D2O95969 90 aa4.43□□□□□ -1.7
SRP54-209ENST00000555746 HNRNPLP14866 589 aaKnown RBP eCLIP4.43□□□□□ -1.7
SRP54-209ENST00000555746 MRE11P49959 708 aa4.43□□□□□ -1.7
SRP54-209ENST00000555746 MEOX1P50221 254 aa4.43□□□□□ -1.7
SRP54-209ENST00000555746 MGAT5Q09328 741 aa4.43□□□□□ -1.7
SRP54-209ENST00000555746 KIAA2012Q0VF49 1180 aa4.43□□□□□ -1.7
SRP54-209ENST00000555746 NFYCQ13952 458 aa4.43□□□□□ -1.7
SRP54-209ENST00000555746 ACAP2Q15057 778 aa4.43□□□□□ -1.7
SRP54-209ENST00000555746 MUM1L1Q5H9M0 696 aa4.43□□□□□ -1.7
SRP54-209ENST00000555746 GJC2Q5T442 439 aaPredicted RBP4.43□□□□□ -1.7
SRP54-209ENST00000555746 NXNQ6DKJ4 435 aa4.43□□□□□ -1.7
SRP54-209ENST00000555746 LMBR1LQ6UX01 489 aa4.43□□□□□ -1.7
SRP54-209ENST00000555746 TAS1R1Q7RTX1 841 aa4.43□□□□□ -1.7
SRP54-209ENST00000555746 RALYLQ86SE5 291 aaKnown RBP4.43□□□□□ -1.7
SRP54-209ENST00000555746 LRRC56Q8IYG6 542 aaPredicted RBP4.43□□□□□ -1.7
SRP54-209ENST00000555746 GLB1L3Q8NCI6 653 aaPredicted RBP4.43□□□□□ -1.7
SRP54-209ENST00000555746 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.43□□□□□ -1.7
SRP54-209ENST00000555746 PIK3C3Q8NEB9 887 aa4.43□□□□□ -1.7
SRP54-209ENST00000555746 SLC2A13Q96QE2 648 aa4.43□□□□□ -1.7
SRP54-209ENST00000555746 OR10A2Q9H208 303 aa4.43□□□□□ -1.7
SRP54-209ENST00000555746 GREM2Q9H772 168 aa4.43□□□□□ -1.7
SRP54-209ENST00000555746 IP6K2Q9UHH9 426 aa4.43□□□□□ -1.7
SRP54-209ENST00000555746 ZNF180Q9UJW8 692 aa4.43□□□□□ -1.7
SRP54-209ENST00000555746 SLC4A7Q9Y6M7 1214 aa4.43□□□□□ -1.7
SRP54-209ENST00000555746 KIAA0556O60303 1618 aa4.43□□□□□ -1.7
SRP54-209ENST00000555746 ALKQ9UM73 1620 aa4.43□□□□□ -1.7
SRP54-209ENST00000555746 PMS2P1A4D2B8 440 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 C2orf78A6NCI8 922 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 DAPK3O43293 454 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 MTSS1O43312 755 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 MARCH6O60337 910 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 B4GALT3O60512 393 aa4.42□□□□□ -1.7
SRP54-209ENST00000555746 LTA4HP09960 611 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms