RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 A0A0U1RQF3 1178 aa12.13□□□□□ -0.47
TDP1-212ENST00000555565 EML1O00423 815 aa12.13□□□□□ -0.47
TDP1-212ENST00000555565 SP9P0CG40 484 aa12.13□□□□□ -0.47
TDP1-212ENST00000555565 DARSP14868 501 aaKnown RBP12.13□□□□□ -0.47
TDP1-212ENST00000555565 AK2P54819 239 aa12.13□□□□□ -0.47
TDP1-212ENST00000555565 MTERF2Q49AM1 385 aa12.13□□□□□ -0.47
TDP1-212ENST00000555565 PPP4R3AQ6IN85 833 aa12.13□□□□□ -0.47
TDP1-212ENST00000555565 OTOP3Q7RTS5 596 aa12.13□□□□□ -0.47
TDP1-212ENST00000555565 DDX53Q86TM3 631 aaKnown RBP12.13□□□□□ -0.47
TDP1-212ENST00000555565 MAML2Q8IZL2 1156 aaPredicted RBP12.13□□□□□ -0.47
TDP1-212ENST00000555565 OXER1Q8TDS5 423 aa12.13□□□□□ -0.47
TDP1-212ENST00000555565 RSAD2Q8WXG1 361 aa12.13□□□□□ -0.47
TDP1-212ENST00000555565 RIN2Q8WYP3 895 aaPredicted RBP12.13□□□□□ -0.47
TDP1-212ENST00000555565 RUBCNQ92622 972 aa12.13□□□□□ -0.47
TDP1-212ENST00000555565 ACSF2Q96CM8 615 aaPredicted RBP12.13□□□□□ -0.47
TDP1-212ENST00000555565 KCNMB3Q9NPA1 279 aa12.13□□□□□ -0.47
TDP1-212ENST00000555565 IGSF9Q9P2J2 1179 aa12.13□□□□□ -0.47
TDP1-212ENST00000555565 SEPT9Q9UHD8 586 aaPredicted RBP12.13□□□□□ -0.47
TDP1-212ENST00000555565 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.12□□□□□ -0.47
TDP1-212ENST00000555565 CCDC194A0A1B0GVG4 234 aa12.12□□□□□ -0.47
TDP1-212ENST00000555565 DDX11L8A8MPP1 907 aa12.12□□□□□ -0.47
TDP1-212ENST00000555565 LILRB3O75022 631 aa12.12□□□□□ -0.47
TDP1-212ENST00000555565 CSDE1O75534 798 aaKnown RBP12.12□□□□□ -0.47
TDP1-212ENST00000555565 CFHP08603 1231 aa12.12□□□□□ -0.47
TDP1-212ENST00000555565 FDPSP14324 419 aaKnown RBP12.12□□□□□ -0.47
TDP1-212ENST00000555565 GLULP15104 373 aa12.12□□□□□ -0.47
TDP1-212ENST00000555565 GCFC2P16383 781 aaKnown RBP12.12□□□□□ -0.47
TDP1-212ENST00000555565 ZSCAN20P17040 1043 aaPredicted RBP12.12□□□□□ -0.47
TDP1-212ENST00000555565 FGFR4P22455 802 aa12.12□□□□□ -0.47
TDP1-212ENST00000555565 ALDH7A1P49419 539 aaKnown RBP12.12□□□□□ -0.47
TDP1-212ENST00000555565 POLGP54098 1239 aaPredicted RBP12.12□□□□□ -0.47
TDP1-212ENST00000555565 PPP2R5CQ13362 524 aa12.12□□□□□ -0.47
TDP1-212ENST00000555565 RSPO4Q2I0M5 234 aaPredicted RBP12.12□□□□□ -0.47
TDP1-212ENST00000555565 EARS2Q5JPH6 523 aaKnown RBP12.12□□□□□ -0.47
TDP1-212ENST00000555565 CCDC149Q6ZUS6 474 aa12.12□□□□□ -0.47
TDP1-212ENST00000555565 ANO5Q75V66 913 aa12.12□□□□□ -0.47
TDP1-212ENST00000555565 NEK8Q86SG6 692 aa12.12□□□□□ -0.47
TDP1-212ENST00000555565 CABP7Q86V35 215 aa12.12□□□□□ -0.47
TDP1-212ENST00000555565 ABI1Q8IZP0 508 aa12.12□□□□□ -0.47
TDP1-212ENST00000555565 SLC44A3Q8N4M1 653 aa12.12□□□□□ -0.47
TDP1-212ENST00000555565 HELQQ8TDG4 1101 aa12.12□□□□□ -0.47
TDP1-212ENST00000555565 NLRP7Q8WX94 980 aa12.12□□□□□ -0.47
TDP1-212ENST00000555565 HAS1Q92839 578 aa12.12□□□□□ -0.47
TDP1-212ENST00000555565 IGSF21Q96ID5 467 aa12.12□□□□□ -0.47
TDP1-212ENST00000555565 FAM20AQ96MK3 541 aa12.12□□□□□ -0.47
TDP1-212ENST00000555565 SCLT1Q96NL6 688 aa12.12□□□□□ -0.47
TDP1-212ENST00000555565 ORC3Q9UBD5 711 aaPredicted RBP12.12□□□□□ -0.47
TDP1-212ENST00000555565 FBXL21Q9UKT6 434 aa12.12□□□□□ -0.47
TDP1-212ENST00000555565 VAV3Q9UKW4 847 aa12.12□□□□□ -0.47
TDP1-212ENST00000555565 FANCMQ8IYD8 2048 aa12.11□□□□□ -0.47
TDP1-212ENST00000555565 POTEMA6NI47 508 aa12.11□□□□□ -0.47
TDP1-212ENST00000555565 MAFO75444 373 aaPredicted RBP12.11□□□□□ -0.47
TDP1-212ENST00000555565 LARGE1O95461 756 aa12.11□□□□□ -0.47
TDP1-212ENST00000555565 DCNP07585 359 aaKnown RBP12.11□□□□□ -0.47
TDP1-212ENST00000555565 XBP1P17861 261 aa12.11□□□□□ -0.47
TDP1-212ENST00000555565 CLCN4P51793 760 aa12.11□□□□□ -0.47
TDP1-212ENST00000555565 PSMC5P62195 406 aa12.11□□□□□ -0.47
TDP1-212ENST00000555565 GIT2Q14161 759 aa12.11□□□□□ -0.47
TDP1-212ENST00000555565 ANKRD1Q15327 319 aa12.11□□□□□ -0.47
TDP1-212ENST00000555565 PTPN14Q15678 1187 aa12.11□□□□□ -0.47
TDP1-212ENST00000555565 ME3Q16798 604 aa12.11□□□□□ -0.47
TDP1-212ENST00000555565 ERICH6BQ5W0A0 696 aa12.11□□□□□ -0.47
TDP1-212ENST00000555565 POTEGQ6S5H5 508 aa12.11□□□□□ -0.47
TDP1-212ENST00000555565 PIK3AP1Q6ZUJ8 805 aa12.11□□□□□ -0.47
TDP1-212ENST00000555565 PIAS4Q8N2W9 510 aaPredicted RBP12.11□□□□□ -0.47
TDP1-212ENST00000555565 NECAB1Q8N987 351 aa12.11□□□□□ -0.47
TDP1-212ENST00000555565 TMEM169Q96HH4 297 aa12.11□□□□□ -0.47
TDP1-212ENST00000555565 KLHL5Q96PQ7 755 aa12.11□□□□□ -0.47
TDP1-212ENST00000555565 SFXN1Q9H9B4 322 aa12.11□□□□□ -0.47
TDP1-212ENST00000555565 WRAP73Q9P2S5 460 aaPredicted RBP12.11□□□□□ -0.47
TDP1-212ENST00000555565 SPTBN2O15020 2390 aa12.11□□□□□ -0.47
TDP1-212ENST00000555565 A0A087WZ62 844 aa12.1□□□□□ -0.47
TDP1-212ENST00000555565 FAM205CA6NFA0 338 aa12.1□□□□□ -0.47
TDP1-212ENST00000555565 TBX3O15119 743 aa12.1□□□□□ -0.47
TDP1-212ENST00000555565 B4GALT3O60512 393 aa12.1□□□□□ -0.47
TDP1-212ENST00000555565 CCNT1O60563 726 aaKnown RBP12.1□□□□□ -0.47
TDP1-212ENST00000555565 GALTP07902 379 aa12.1□□□□□ -0.47
TDP1-212ENST00000555565 QARSP47897 775 aaKnown RBP12.1□□□□□ -0.47
TDP1-212ENST00000555565 DNM2P50570 870 aa12.1□□□□□ -0.47
TDP1-212ENST00000555565 ATXN1P54253 815 aaKnown RBP12.1□□□□□ -0.47
TDP1-212ENST00000555565 NPEPPSP55786 919 aa12.1□□□□□ -0.47
TDP1-212ENST00000555565 CDC42EP1Q00587 391 aa12.1□□□□□ -0.47
TDP1-212ENST00000555565 NR5A1Q13285 461 aa12.1□□□□□ -0.47
TDP1-212ENST00000555565 PLA2G4FQ68DD2 849 aa12.1□□□□□ -0.47
TDP1-212ENST00000555565 PHLDB3Q6NSJ2 640 aa12.1□□□□□ -0.47
TDP1-212ENST00000555565 C15orf39Q6ZRI6 1047 aa12.1□□□□□ -0.47
TDP1-212ENST00000555565 C1orf210Q8IVY1 113 aa12.1□□□□□ -0.47
TDP1-212ENST00000555565 ZNF579Q8NAF0 562 aaKnown RBP12.1□□□□□ -0.47
TDP1-212ENST00000555565 RNF169Q8NCN4 708 aa12.1□□□□□ -0.47
TDP1-212ENST00000555565 TNFRSF25Q93038 417 aa12.1□□□□□ -0.47
TDP1-212ENST00000555565 FDXACB1Q9BRP7 624 aaPredicted RBP12.1□□□□□ -0.47
TDP1-212ENST00000555565 GCOM2Q9BZD3 368 aaPredicted RBP12.1□□□□□ -0.47
TDP1-212ENST00000555565 NRDE2Q9H7Z3 1164 aa12.1□□□□□ -0.47
TDP1-212ENST00000555565 TBC1D17Q9HA65 648 aa12.1□□□□□ -0.47
TDP1-212ENST00000555565 SUCLA2Q9P2R7 463 aaPredicted RBP12.1□□□□□ -0.47
TDP1-212ENST00000555565 EPS15L1Q9UBC2 864 aa12.1□□□□□ -0.47
TDP1-212ENST00000555565 CA14Q9ULX7 337 aa12.1□□□□□ -0.47
TDP1-212ENST00000555565 C2orf16Q68DN1 1984 aa12.09□□□□□ -0.47
TDP1-212ENST00000555565 CACNA1IQ9P0X4 2223 aa12.09□□□□□ -0.47
TDP1-212ENST00000555565 MEIS3P2A8K0S8 358 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms