RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 ID4P47928 161 aa12.21□□□□□ -0.45
SRP54-205ENST00000554803 AARSP49588 968 aaKnown RBP eCLIP12.21□□□□□ -0.45
SRP54-205ENST00000554803 ZXDAP98168 799 aa12.21□□□□□ -0.45
SRP54-205ENST00000554803 AMPD2Q01433 879 aa12.21□□□□□ -0.45
SRP54-205ENST00000554803 GPM6BQ13491 265 aa12.21□□□□□ -0.45
SRP54-205ENST00000554803 ZNF174Q15697 407 aa12.21□□□□□ -0.45
SRP54-205ENST00000554803 CDC37Q16543 378 aaPredicted RBP12.21□□□□□ -0.45
SRP54-205ENST00000554803 CTC1Q2NKJ3 1217 aa12.21□□□□□ -0.45
SRP54-205ENST00000554803 QRICH1Q2TAL8 776 aa12.21□□□□□ -0.45
SRP54-205ENST00000554803 BRDTQ58F21 947 aaPredicted RBP12.21□□□□□ -0.45
SRP54-205ENST00000554803 TYW1BQ6NUM6 668 aa12.21□□□□□ -0.45
SRP54-205ENST00000554803 USP49Q70CQ1 688 aa12.21□□□□□ -0.45
SRP54-205ENST00000554803 LRRC8DQ7L1W4 858 aa12.21□□□□□ -0.45
SRP54-205ENST00000554803 ASCL5Q7RTU5 278 aa12.21□□□□□ -0.45
SRP54-205ENST00000554803 OR6J1Q8NGC5 347 aa12.21□□□□□ -0.45
SRP54-205ENST00000554803 EIF3CQ99613 913 aaKnown RBP12.21□□□□□ -0.45
SRP54-205ENST00000554803 DESI2Q9BSY9 194 aa12.21□□□□□ -0.45
SRP54-205ENST00000554803 WDR11Q9BZH6 1224 aa12.21□□□□□ -0.45
SRP54-205ENST00000554803 FAM107BQ9H098 131 aa12.21□□□□□ -0.45
SRP54-205ENST00000554803 NUCKS1Q9H1E3 243 aaKnown RBP12.21□□□□□ -0.45
SRP54-205ENST00000554803 ANKZF1Q9H8Y5 726 aa12.21□□□□□ -0.45
SRP54-205ENST00000554803 LZTFL1Q9NQ48 299 aa12.21□□□□□ -0.45
SRP54-205ENST00000554803 KBTBD4Q9NVX7 518 aa12.21□□□□□ -0.45
SRP54-205ENST00000554803 CYP39A1Q9NYL5 469 aa12.21□□□□□ -0.45
SRP54-205ENST00000554803 PNMA2Q9UL42 364 aa12.21□□□□□ -0.45
SRP54-205ENST00000554803 ESYT2A0FGR8 921 aa12.2□□□□□ -0.46
SRP54-205ENST00000554803 STXBP3O00186 592 aa12.2□□□□□ -0.46
SRP54-205ENST00000554803 KPNA6O60684 536 aa12.2□□□□□ -0.46
SRP54-205ENST00000554803 SASH3O75995 380 aa12.2□□□□□ -0.46
SRP54-205ENST00000554803 ATP2B1P20020 1258 aa12.2□□□□□ -0.46
SRP54-205ENST00000554803 CCNE1P24864 410 aa12.2□□□□□ -0.46
SRP54-205ENST00000554803 GNA11P29992 359 aa12.2□□□□□ -0.46
SRP54-205ENST00000554803 HNRNPH3P31942 346 aaKnown RBP12.2□□□□□ -0.46
SRP54-205ENST00000554803 ARHGAP25P42331 645 aa12.2□□□□□ -0.46
SRP54-205ENST00000554803 VCPP55072 806 aaKnown RBP12.2□□□□□ -0.46
SRP54-205ENST00000554803 ZBED6P86452 979 aa12.2□□□□□ -0.46
SRP54-205ENST00000554803 UBXN1Q04323 297 aa12.2□□□□□ -0.46
SRP54-205ENST00000554803 SMAD4Q13485 552 aaKnown RBP12.2□□□□□ -0.46
SRP54-205ENST00000554803 IKBKEQ14164 716 aa12.2□□□□□ -0.46
SRP54-205ENST00000554803 CLUL1Q15846 466 aa12.2□□□□□ -0.46
SRP54-205ENST00000554803 PTGISQ16647 500 aa12.2□□□□□ -0.46
SRP54-205ENST00000554803 CNNM4Q6P4Q7 775 aa12.2□□□□□ -0.46
SRP54-205ENST00000554803 TRAPPC11Q7Z392 1133 aa12.2□□□□□ -0.46
SRP54-205ENST00000554803 ZNF572Q7Z3I7 529 aaPredicted RBP12.2□□□□□ -0.46
SRP54-205ENST00000554803 HEATR3Q7Z4Q2 680 aa12.2□□□□□ -0.46
SRP54-205ENST00000554803 GRAMD1CQ8IYS0 662 aa12.2□□□□□ -0.46
SRP54-205ENST00000554803 PIAS4Q8N2W9 510 aaPredicted RBP12.2□□□□□ -0.46
SRP54-205ENST00000554803 SLC35F6Q8N357 371 aa12.2□□□□□ -0.46
SRP54-205ENST00000554803 C4orf32Q8N8J7 132 aa12.2□□□□□ -0.46
SRP54-205ENST00000554803 ZNF507Q8TCN5 953 aa12.2□□□□□ -0.46
SRP54-205ENST00000554803 DHX38Q92620 1227 aaKnown RBP12.2□□□□□ -0.46
SRP54-205ENST00000554803 TRERF1Q96PN7 1200 aa12.2□□□□□ -0.46
SRP54-205ENST00000554803 ERGIC2Q96RQ1 377 aa12.2□□□□□ -0.46
SRP54-205ENST00000554803 RNF14Q9UBS8 474 aa12.2□□□□□ -0.46
SRP54-205ENST00000554803 SAR1BQ9Y6B6 198 aa12.2□□□□□ -0.46
SRP54-205ENST00000554803 CEP250Q9BV73 2442 aa12.2□□□□□ -0.46
SRP54-205ENST00000554803 MYO10Q9HD67 2058 aa12.2□□□□□ -0.46
SRP54-205ENST00000554803 PNMA6FA0A0J9YX94 578 aa12.19□□□□□ -0.46
SRP54-205ENST00000554803 PRR23AA6NEV1 266 aa12.19□□□□□ -0.46
SRP54-205ENST00000554803 A6NJR5 290 aa12.19□□□□□ -0.46
SRP54-205ENST00000554803 M0R2N6 131 aa12.19□□□□□ -0.46
SRP54-205ENST00000554803 ZBTB5O15062 677 aa12.19□□□□□ -0.46
SRP54-205ENST00000554803 USO1O60763 962 aaKnown RBP12.19□□□□□ -0.46
SRP54-205ENST00000554803 AVPR2P30518 371 aa12.19□□□□□ -0.46
SRP54-205ENST00000554803 ACTN2P35609 894 aa12.19□□□□□ -0.46
SRP54-205ENST00000554803 DLX2Q07687 328 aaPredicted RBP12.19□□□□□ -0.46
SRP54-205ENST00000554803 FKBP15Q5T1M5 1219 aa12.19□□□□□ -0.46
SRP54-205ENST00000554803 PIK3AP1Q6ZUJ8 805 aa12.19□□□□□ -0.46
SRP54-205ENST00000554803 TRIM58Q8NG06 486 aa12.19□□□□□ -0.46
SRP54-205ENST00000554803 C7orf25Q9BPX7 421 aa12.19□□□□□ -0.46
SRP54-205ENST00000554803 RAB34Q9BZG1 259 aa12.19□□□□□ -0.46
SRP54-205ENST00000554803 RANBP17Q9H2T7 1088 aaKnown RBP12.19□□□□□ -0.46
SRP54-205ENST00000554803 LUC7LQ9NQ29 371 aaKnown RBP12.19□□□□□ -0.46
SRP54-205ENST00000554803 EXOC1Q9NV70 894 aa12.19□□□□□ -0.46
SRP54-205ENST00000554803 STK17AQ9UEE5 414 aa12.19□□□□□ -0.46
SRP54-205ENST00000554803 SEC63Q9UGP8 760 aaKnown RBP12.19□□□□□ -0.46
SRP54-205ENST00000554803 ADAM21Q9UKJ8 722 aa12.19□□□□□ -0.46
SRP54-205ENST00000554803 BAHCC1Q9P281 2608 aa12.19□□□□□ -0.46
SRP54-205ENST00000554803 CHD6Q8TD26 2715 aa12.18□□□□□ -0.46
SRP54-205ENST00000554803 LOC102724159A0A0B4J2E5 919 aa12.18□□□□□ -0.46
SRP54-205ENST00000554803 PVALEFA0A1B0GWK0 134 aa12.18□□□□□ -0.46
SRP54-205ENST00000554803 H0Y858 1186 aa12.18□□□□□ -0.46
SRP54-205ENST00000554803 NKRFO15226 690 aaKnown RBP eCLIP12.18□□□□□ -0.46
SRP54-205ENST00000554803 SEC31AO94979 1220 aaKnown RBP12.18□□□□□ -0.46
SRP54-205ENST00000554803 CKBP12277 381 aa12.18□□□□□ -0.46
SRP54-205ENST00000554803 ALAS1P13196 640 aa12.18□□□□□ -0.46
SRP54-205ENST00000554803 PRCPP42785 496 aa12.18□□□□□ -0.46
SRP54-205ENST00000554803 NUBP1P53384 320 aa12.18□□□□□ -0.46
SRP54-205ENST00000554803 STX17P56962 302 aa12.18□□□□□ -0.46
SRP54-205ENST00000554803 GOLGA8FQ08AF8 430 aa12.18□□□□□ -0.46
SRP54-205ENST00000554803 SIGLEC14Q08ET2 396 aa12.18□□□□□ -0.46
SRP54-205ENST00000554803 GOLGA8DPQ0D2H9 430 aa12.18□□□□□ -0.46
SRP54-205ENST00000554803 MKRN4PQ13434 485 aaPredicted RBP12.18□□□□□ -0.46
SRP54-205ENST00000554803 MTF1Q14872 753 aa12.18□□□□□ -0.46
SRP54-205ENST00000554803 PWP2Q15269 919 aaKnown RBP12.18□□□□□ -0.46
SRP54-205ENST00000554803 ZSCAN26Q16670 478 aa12.18□□□□□ -0.46
SRP54-205ENST00000554803 GDF6Q6KF10 455 aaPredicted RBP12.18□□□□□ -0.46
SRP54-205ENST00000554803 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.18□□□□□ -0.46
SRP54-205ENST00000554803 SESTD1Q86VW0 696 aa12.18□□□□□ -0.46
SRP54-205ENST00000554803 NAP1L4Q99733 375 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms