RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 POLR1DQ9Y2S0 133 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 HEY1Q9Y5J3 304 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 SPTBN2O15020 2390 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 PDHA2P29803 388 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 CCL23P55773 120 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 C2CD6Q53TS8 623 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 TMC4Q7Z404 712 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 USP6NLQ92738 828 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 VCX3AQ9NNX9 186 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 IPPQ9Y573 584 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 SMAD9O15198 467 aaKnown RBP3.51□□□□□ -1.85
SYNE2-212ENST00000554584 EIF2S1P05198 315 aaKnown RBP3.51□□□□□ -1.85
SYNE2-212ENST00000554584 ATF2P15336 505 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 FGFR2P21802 821 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 MSX1P28360 303 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 RABGGTBP53611 331 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 GNGT1P63211 74 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 CDC37Q16543 378 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-212ENST00000554584 KIAA1324Q6UXG2 1013 aaKnown RBP3.51□□□□□ -1.85
SYNE2-212ENST00000554584 ZYG11AQ6WRX3 759 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 SPATS2LQ9NUQ6 558 aaKnown RBP3.51□□□□□ -1.85
SYNE2-212ENST00000554584 SPTBP11277 2137 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 MYH13Q9UKX3 1938 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 TMEM247A6NEH6 219 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 PQBP1O60828 265 aaKnown RBP3.51□□□□□ -1.85
SYNE2-212ENST00000554584 PDGFRBP09619 1106 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 FGFR1P11362 822 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 RPS8P62241 208 aaKnown RBP3.51□□□□□ -1.85
SYNE2-212ENST00000554584 C8orf34Q49A92 452 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 DIS3L2Q8IYB7 885 aaKnown RBP3.51□□□□□ -1.85
SYNE2-212ENST00000554584 LNX2Q8N448 690 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 UBASH3BQ8TF42 649 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 ABHD5Q8WTS1 349 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 DNAJA3Q96EY1 480 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 RALYQ9UKM9 306 aaKnown RBP3.51□□□□□ -1.85
SYNE2-212ENST00000554584 COQ6Q9Y2Z9 468 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 GCP02774 474 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 PCNAP12004 261 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 CXCR3P49682 368 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 PSEN2P49810 448 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 FMR1Q06787 632 aaKnown RBP eCLIP3.51□□□□□ -1.85
SYNE2-212ENST00000554584 NUDCD1Q96RS6 583 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 LSG1Q9H089 658 aaKnown RBP3.51□□□□□ -1.85
SYNE2-212ENST00000554584 SLC35C2Q9NQQ7 365 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 FAM49BQ9NUQ9 324 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-212ENST00000554584 PCDHGA4Q9Y5G9 962 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 NPATQ14207 1427 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 ABCG1P45844 678 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 AGGF1Q8N302 714 aaeCLIP3.51□□□□□ -1.85
SYNE2-212ENST00000554584 LENG1Q96BZ8 264 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-212ENST00000554584 ORC6Q9Y5N6 252 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 CACNA1CQ13936 2221 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 C15orf38-AP3S2A0A0A6YYH1 394 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 TRIM64A6NGJ6 449 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 CAND2O75155 1236 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 PLEKHA8P1O95397 391 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 PPARAQ07869 468 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 KLHL40Q2TBA0 621 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 GPR152Q8TDT2 470 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 CELF1Q92879 486 aaKnown RBP3.51□□□□□ -1.85
SYNE2-212ENST00000554584 KLHL8Q9P2G9 620 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-212ENST00000554584 ARHGAP26Q9UNA1 814 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 SYNRGQ9UMZ2 1314 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 AKR1B15C9JRZ8 316 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-212ENST00000554584 PCDH8O95206 1070 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 GTF2H3Q13889 308 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 RABL6Q3YEC7 729 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-212ENST00000554584 GAL3ST3Q96A11 431 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 PIH1D3Q9NQM4 214 aaKnown RBP3.51□□□□□ -1.85
SYNE2-212ENST00000554584 PP2D1A8MPX8 630 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 PRR23D1E9PI22 279 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-212ENST00000554584 HSPA4LO95757 839 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 PRR23D2P0DMB1 279 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-212ENST00000554584 ARHGAP25P42331 645 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 POLD2P49005 469 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 LRRC36Q1X8D7 754 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 NEK7Q8TDX7 302 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 GLMNQ92990 594 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 DDX50Q9BQ39 737 aaKnown RBP3.51□□□□□ -1.85
SYNE2-212ENST00000554584 ELP1O95163 1332 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 E9PMD0 336 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 KPNA1P52294 538 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-212ENST00000554584 PEX3P56589 373 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 DPYDQ12882 1025 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 TBC1D9BQ66K14 1250 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 RNF146Q9NTX7 359 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 CAB39Q9Y376 341 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-212ENST00000554584 POLRMTO00411 1230 aaKnown RBP3.51□□□□□ -1.85
SYNE2-212ENST00000554584 DBIP07108 87 aaKnown RBP3.51□□□□□ -1.85
SYNE2-212ENST00000554584 IQCDQ96DY2 449 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 IFT43Q96FT9 208 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 PIM2Q9P1W9 311 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 RUVBL2Q9Y230 463 aaKnown RBP3.51□□□□□ -1.85
SYNE2-212ENST00000554584 PCDHA5Q9Y5H7 936 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 PCDHAC2Q9Y5I4 1007 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 KCNH1O95259 989 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 HOXC9P31274 260 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 GARSP41250 739 aaKnown RBP3.51□□□□□ -1.85
SYNE2-212ENST00000554584 ARHGAP17Q68EM7 881 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms