RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 VCAM1P19320 739 aa6.89□□□□□ -1.31
ATXN3-226ENST00000554350 PTPROQ16827 1216 aa6.89□□□□□ -1.31
ATXN3-226ENST00000554350 TIGD5Q53EQ6 642 aa6.89□□□□□ -1.31
ATXN3-226ENST00000554350 CCSAPQ6IQ19 270 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-226ENST00000554350 TMCO2Q7Z6W1 182 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-226ENST00000554350 TSPYL5Q86VY4 417 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-226ENST00000554350 SIAH1Q8IUQ4 282 aa6.89□□□□□ -1.31
ATXN3-226ENST00000554350 SHCBP1Q8NEM2 672 aa6.89□□□□□ -1.31
ATXN3-226ENST00000554350 MMP19Q99542 508 aa6.89□□□□□ -1.31
ATXN3-226ENST00000554350 TANGO6Q9C0B7 1094 aa6.89□□□□□ -1.31
ATXN3-226ENST00000554350 RNF32Q9H0A6 362 aa6.89□□□□□ -1.31
ATXN3-226ENST00000554350 DCP1AQ9NPI6 582 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-226ENST00000554350 C9orf78Q9NZ63 289 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-226ENST00000554350 ZBTB21Q9ULJ3 1066 aa6.89□□□□□ -1.31
ATXN3-226ENST00000554350 ROBO3Q96MS0 1386 aa6.88□□□□□ -1.31
ATXN3-226ENST00000554350 MROH7-TTC4A0A0A0MT08 1334 aa6.88□□□□□ -1.31
ATXN3-226ENST00000554350 KIF16BQ96L93 1317 aa6.88□□□□□ -1.31
ATXN3-226ENST00000554350 F6X3S4 739 aa6.88□□□□□ -1.31
ATXN3-226ENST00000554350 B4GALT4O60513 344 aa6.88□□□□□ -1.31
ATXN3-226ENST00000554350 ZSCAN22P10073 491 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-226ENST00000554350 USP14P54578 494 aa6.88□□□□□ -1.31
ATXN3-226ENST00000554350 SIGLEC14Q08ET2 396 aa6.88□□□□□ -1.31
ATXN3-226ENST00000554350 RAB3GAP1Q15042 981 aa6.88□□□□□ -1.31
ATXN3-226ENST00000554350 TCEAL5Q5H9L2 206 aa6.88□□□□□ -1.31
ATXN3-226ENST00000554350 LBX2Q6XYB7 198 aa6.88□□□□□ -1.31
ATXN3-226ENST00000554350 NOL8Q76FK4 1167 aaKnown RBP6.88□□□□□ -1.31
ATXN3-226ENST00000554350 FAM9BQ8IZU0 186 aa6.88□□□□□ -1.31
ATXN3-226ENST00000554350 ZGPATQ8N5A5 531 aaKnown RBP6.88□□□□□ -1.31
ATXN3-226ENST00000554350 PABPC5Q96DU9 382 aaKnown RBP6.88□□□□□ -1.31
ATXN3-226ENST00000554350 EPB41L4BQ9H329 900 aa6.88□□□□□ -1.31
ATXN3-226ENST00000554350 MROH8Q9H579 483 aa6.88□□□□□ -1.31
ATXN3-226ENST00000554350 PI4KBQ9UBF8 816 aa6.88□□□□□ -1.31
ATXN3-226ENST00000554350 CTNNA3Q9UI47 895 aa6.88□□□□□ -1.31
ATXN3-226ENST00000554350 FASNP49327 2511 aaKnown RBP6.88□□□□□ -1.31
ATXN3-226ENST00000554350 ZFHX4Q86UP3 3567 aa6.88□□□□□ -1.31
ATXN3-226ENST00000554350 CFAP47Q6ZTR5 3102 aa6.87□□□□□ -1.31
ATXN3-226ENST00000554350 SPTBN2O15020 2390 aa6.87□□□□□ -1.31
ATXN3-226ENST00000554350 NPIPB6E9PJ23 425 aa6.87□□□□□ -1.31
ATXN3-226ENST00000554350 ETV2O00321 342 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-226ENST00000554350 NFIBO00712 420 aa6.87□□□□□ -1.31
ATXN3-226ENST00000554350 DNAJA2O60884 412 aa6.87□□□□□ -1.31
ATXN3-226ENST00000554350 DUSP11O75319 330 aaKnown RBP6.87□□□□□ -1.31
ATXN3-226ENST00000554350 GH2P01242 217 aa6.87□□□□□ -1.31
ATXN3-226ENST00000554350 RLBP1P12271 317 aa6.87□□□□□ -1.31
ATXN3-226ENST00000554350 PLCG1P19174 1290 aa6.87□□□□□ -1.31
ATXN3-226ENST00000554350 CST5P28325 142 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-226ENST00000554350 ERVK-21P61565 698 aa6.87□□□□□ -1.31
ATXN3-226ENST00000554350 BEX3Q00994 111 aa6.87□□□□□ -1.31
ATXN3-226ENST00000554350 EGR3Q06889 387 aa6.87□□□□□ -1.31
ATXN3-226ENST00000554350 ITGA7Q13683 1181 aa6.87□□□□□ -1.31
ATXN3-226ENST00000554350 SMAD2Q15796 467 aaKnown RBP6.87□□□□□ -1.31
ATXN3-226ENST00000554350 CXCL17Q6UXB2 119 aa6.87□□□□□ -1.31
ATXN3-226ENST00000554350 DNAJC14Q6Y2X3 702 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-226ENST00000554350 RPAINQ86UA6 219 aa6.87□□□□□ -1.31
ATXN3-226ENST00000554350 TEX11Q8IYF3 940 aa6.87□□□□□ -1.31
ATXN3-226ENST00000554350 SLFN12Q8IYM2 578 aa6.87□□□□□ -1.31
ATXN3-226ENST00000554350 ABRAQ8N0Z2 381 aa6.87□□□□□ -1.31
ATXN3-226ENST00000554350 FAM13CQ8NE31 585 aa6.87□□□□□ -1.31
ATXN3-226ENST00000554350 ZSCAN18Q8TBC5 510 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-226ENST00000554350 MRPL38Q96DV4 380 aaKnown RBP6.87□□□□□ -1.31
ATXN3-226ENST00000554350 RHOVQ96L33 236 aa6.87□□□□□ -1.31
ATXN3-226ENST00000554350 C12orf42Q96LP6 360 aa6.87□□□□□ -1.31
ATXN3-226ENST00000554350 TRIT1Q9H3H1 467 aaKnown RBP6.87□□□□□ -1.31
ATXN3-226ENST00000554350 EBF1Q9UH73 591 aa6.87□□□□□ -1.31
ATXN3-226ENST00000554350 DUSP13Q9UII6 198 aa6.87□□□□□ -1.31
ATXN3-226ENST00000554350 DENND2AQ9ULE3 1009 aa6.87□□□□□ -1.31
ATXN3-226ENST00000554350 POLR3KQ9Y2Y1 108 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-226ENST00000554350 ANKRD11Q6UB99 2663 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-226ENST00000554350 TRIOO75962 3097 aa6.86□□□□□ -1.31
ATXN3-226ENST00000554350 EP300Q09472 2414 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-226ENST00000554350 FAM208BQ5VWN6 2430 aa6.86□□□□□ -1.31
ATXN3-226ENST00000554350 SALL1Q9NSC2 1324 aa6.86□□□□□ -1.31
ATXN3-226ENST00000554350 LINC01553A4QN01 128 aa6.86□□□□□ -1.31
ATXN3-226ENST00000554350 GRM8O00222 908 aa6.86□□□□□ -1.31
ATXN3-226ENST00000554350 MBTPS2O43462 519 aa6.86□□□□□ -1.31
ATXN3-226ENST00000554350 F13A1P00488 732 aa6.86□□□□□ -1.31
ATXN3-226ENST00000554350 PDGFBP01127 241 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-226ENST00000554350 CYP2C9P11712 490 aa6.86□□□□□ -1.31
ATXN3-226ENST00000554350 GLDCP23378 1020 aa6.86□□□□□ -1.31
ATXN3-226ENST00000554350 RHBDL3P58872 404 aa6.86□□□□□ -1.31
ATXN3-226ENST00000554350 PSMC6P62333 389 aa6.86□□□□□ -1.31
ATXN3-226ENST00000554350 GNAI1P63096 354 aa6.86□□□□□ -1.31
ATXN3-226ENST00000554350 LMNB2Q03252 620 aa6.86□□□□□ -1.31
ATXN3-226ENST00000554350 CAMK2GQ13555 558 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-226ENST00000554350 COG2Q14746 738 aa6.86□□□□□ -1.31
ATXN3-226ENST00000554350 SPTY2D1Q68D10 685 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-226ENST00000554350 ATG14Q6ZNE5 492 aa6.86□□□□□ -1.31
ATXN3-226ENST00000554350 SND1Q7KZF4 910 aaKnown RBP eCLIP6.86□□□□□ -1.31
ATXN3-226ENST00000554350 TSPYL6Q8N831 410 aa6.86□□□□□ -1.31
ATXN3-226ENST00000554350 VGLL2Q8N8G2 317 aa6.86□□□□□ -1.31
ATXN3-226ENST00000554350 RNF141Q8WVD5 230 aa6.86□□□□□ -1.31
ATXN3-226ENST00000554350 GATAD2BQ8WXI9 593 aa6.86□□□□□ -1.31
ATXN3-226ENST00000554350 LPIN2Q92539 896 aa6.86□□□□□ -1.31
ATXN3-226ENST00000554350 VWCEQ96DN2 955 aa6.86□□□□□ -1.31
ATXN3-226ENST00000554350 NOL10Q9BSC4 688 aaKnown RBP6.86□□□□□ -1.31
ATXN3-226ENST00000554350 GINM1Q9NU53 330 aa6.86□□□□□ -1.31
ATXN3-226ENST00000554350 GPATCH2Q9NW75 528 aa6.86□□□□□ -1.31
ATXN3-226ENST00000554350 HOXC10Q9NYD6 342 aa6.86□□□□□ -1.31
ATXN3-226ENST00000554350 SCN5AQ14524 2016 aa6.86□□□□□ -1.31
ATXN3-226ENST00000554350 GPR75-ASB3A0A0A6YYF3 556 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms