RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 MNS1Q8NEH6 495 aa6.67□□□□□ -1.34
VPS33B-203ENST00000554264 FLCNQ8NFG4 579 aa6.67□□□□□ -1.34
VPS33B-203ENST00000554264 RNF141Q8WVD5 230 aa6.67□□□□□ -1.34
VPS33B-203ENST00000554264 WASF1Q92558 559 aa6.67□□□□□ -1.34
VPS33B-203ENST00000554264 HRASLS5Q96KN8 279 aa6.67□□□□□ -1.34
VPS33B-203ENST00000554264 WRNIP1Q96S55 665 aa6.67□□□□□ -1.34
VPS33B-203ENST00000554264 TMEM39BQ9GZU3 492 aa6.67□□□□□ -1.34
VPS33B-203ENST00000554264 DUSP15Q9H1R2 295 aaPredicted RBP6.67□□□□□ -1.34
VPS33B-203ENST00000554264 BOLA2Q9H3K6 86 aa6.67□□□□□ -1.34
VPS33B-203ENST00000554264 ATP13A1Q9HD20 1204 aa6.67□□□□□ -1.34
VPS33B-203ENST00000554264 TMOD2Q9NZR1 351 aa6.67□□□□□ -1.34
VPS33B-203ENST00000554264 RIPOR2Q9Y4F9 1068 aa6.67□□□□□ -1.34
VPS33B-203ENST00000554264 MYH3P11055 1940 aa6.67□□□□□ -1.34
VPS33B-203ENST00000554264 FAM205AQ6ZU69 1335 aa6.67□□□□□ -1.34
VPS33B-203ENST00000554264 BRCA2P51587 3418 aa6.66□□□□□ -1.34
VPS33B-203ENST00000554264 OTOFQ9HC10 1997 aa6.66□□□□□ -1.34
VPS33B-203ENST00000554264 FAM86C2PA6NEL3 165 aa6.66□□□□□ -1.34
VPS33B-203ENST00000554264 SNAP23O00161 211 aa6.66□□□□□ -1.34
VPS33B-203ENST00000554264 SPTLC2O15270 562 aa6.66□□□□□ -1.34
VPS33B-203ENST00000554264 ARHGAP6O43182 974 aa6.66□□□□□ -1.34
VPS33B-203ENST00000554264 CCL5P13501 91 aa6.66□□□□□ -1.34
VPS33B-203ENST00000554264 ATF4P18848 351 aaPredicted RBP6.66□□□□□ -1.34
VPS33B-203ENST00000554264 HIBADHP31937 336 aaKnown RBP6.66□□□□□ -1.34
VPS33B-203ENST00000554264 KIR3DL1P43629 444 aa6.66□□□□□ -1.34
VPS33B-203ENST00000554264 CLCN7P51798 805 aa6.66□□□□□ -1.34
VPS33B-203ENST00000554264 MYL5Q02045 173 aa6.66□□□□□ -1.34
VPS33B-203ENST00000554264 PPATQ06203 517 aa6.66□□□□□ -1.34
VPS33B-203ENST00000554264 COL9A2Q14055 689 aaPredicted RBP6.66□□□□□ -1.34
VPS33B-203ENST00000554264 UBE4AQ14139 1066 aa6.66□□□□□ -1.34
VPS33B-203ENST00000554264 IMMTQ16891 758 aaKnown RBP6.66□□□□□ -1.34
VPS33B-203ENST00000554264 CCDC144BQ3MJ40 725 aa6.66□□□□□ -1.34
VPS33B-203ENST00000554264 TAF7LQ5H9L4 462 aa6.66□□□□□ -1.34
VPS33B-203ENST00000554264 DCAF15Q66K64 600 aa6.66□□□□□ -1.34
VPS33B-203ENST00000554264 TMED8Q6PL24 325 aaPredicted RBP6.66□□□□□ -1.34
VPS33B-203ENST00000554264 ANKRD23Q86SG2 305 aa6.66□□□□□ -1.34
VPS33B-203ENST00000554264 CCDC144CPQ8IYA2 1237 aa6.66□□□□□ -1.34
VPS33B-203ENST00000554264 TRIML1Q8N9V2 468 aa6.66□□□□□ -1.34
VPS33B-203ENST00000554264 DTWD2Q8NBA8 298 aa6.66□□□□□ -1.34
VPS33B-203ENST00000554264 LINC00301Q8NCQ3 95 aa6.66□□□□□ -1.34
VPS33B-203ENST00000554264 UBXN4Q92575 508 aa6.66□□□□□ -1.34
VPS33B-203ENST00000554264 MISP3Q96FF7 219 aa6.66□□□□□ -1.34
VPS33B-203ENST00000554264 KAZALD1Q96I82 304 aa6.66□□□□□ -1.34
VPS33B-203ENST00000554264 C8orf76Q96K31 380 aa6.66□□□□□ -1.34
VPS33B-203ENST00000554264 FBXL18Q96ME1 805 aa6.66□□□□□ -1.34
VPS33B-203ENST00000554264 TINF2Q9BSI4 451 aa6.66□□□□□ -1.34
VPS33B-203ENST00000554264 MTA3Q9BTC8 594 aa6.66□□□□□ -1.34
VPS33B-203ENST00000554264 NAA15Q9BXJ9 866 aaKnown RBP6.66□□□□□ -1.34
VPS33B-203ENST00000554264 CCDC8Q9H0W5 538 aaPredicted RBP6.66□□□□□ -1.34
VPS33B-203ENST00000554264 CAPN10Q9HC96 672 aa6.66□□□□□ -1.34
VPS33B-203ENST00000554264 PAG1Q9NWQ8 432 aa6.66□□□□□ -1.34
VPS33B-203ENST00000554264 CWC15Q9P013 229 aaKnown RBP6.66□□□□□ -1.34
VPS33B-203ENST00000554264 DBNLQ9UJU6 430 aaKnown RBP6.66□□□□□ -1.34
VPS33B-203ENST00000554264 ZNF215Q9UL58 517 aaPredicted RBP6.66□□□□□ -1.34
VPS33B-203ENST00000554264 JAG2Q9Y219 1238 aa6.66□□□□□ -1.34
VPS33B-203ENST00000554264 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.66□□□□□ -1.34
VPS33B-203ENST00000554264 MYPNQ86TC9 1320 aa6.66□□□□□ -1.34
VPS33B-203ENST00000554264 CENPFP49454 3210 aa6.66□□□□□ -1.34
VPS33B-203ENST00000554264 SHISA3A0PJX4 238 aa6.65□□□□□ -1.34
VPS33B-203ENST00000554264 PDHXO00330 501 aa6.65□□□□□ -1.34
VPS33B-203ENST00000554264 RNF113AO15541 343 aaKnown RBP6.65□□□□□ -1.34
VPS33B-203ENST00000554264 JAK2O60674 1132 aa6.65□□□□□ -1.34
VPS33B-203ENST00000554264 SRFP11831 508 aa6.65□□□□□ -1.34
VPS33B-203ENST00000554264 IMPDH2P12268 514 aa6.65□□□□□ -1.34
VPS33B-203ENST00000554264 RFX5P48382 616 aaPredicted RBP6.65□□□□□ -1.34
VPS33B-203ENST00000554264 GIPRP48546 466 aa6.65□□□□□ -1.34
VPS33B-203ENST00000554264 RCAN1P53805 252 aa6.65□□□□□ -1.34
VPS33B-203ENST00000554264 STK3Q13188 491 aa6.65□□□□□ -1.34
VPS33B-203ENST00000554264 CCDC57Q2TAC2 916 aa6.65□□□□□ -1.34
VPS33B-203ENST00000554264 FKBP1CQ5VVH2 108 aa6.65□□□□□ -1.34
VPS33B-203ENST00000554264 LDHAL6AQ6ZMR3 332 aa6.65□□□□□ -1.34
VPS33B-203ENST00000554264 C11orf57Q6ZUT1 292 aaPredicted RBP6.65□□□□□ -1.34
VPS33B-203ENST00000554264 ZNF589Q86UQ0 364 aaPredicted RBP6.65□□□□□ -1.34
VPS33B-203ENST00000554264 FAM83AQ86UY5 434 aa6.65□□□□□ -1.34
VPS33B-203ENST00000554264 TP53INP2Q8IXH6 220 aa6.65□□□□□ -1.34
VPS33B-203ENST00000554264 STK11IPQ8N1F8 1099 aa6.65□□□□□ -1.34
VPS33B-203ENST00000554264 AOPEPQ8N6M6 819 aa6.65□□□□□ -1.34
VPS33B-203ENST00000554264 FBXO18Q8NFZ0 1043 aa6.65□□□□□ -1.34
VPS33B-203ENST00000554264 U2AF1L4Q8WU68 220 aaKnown RBP6.65□□□□□ -1.34
VPS33B-203ENST00000554264 TBC1D22AQ8WUA7 517 aa6.65□□□□□ -1.34
VPS33B-203ENST00000554264 ZKSCAN4Q969J2 545 aaPredicted RBP6.65□□□□□ -1.34
VPS33B-203ENST00000554264 UBE2FQ969M7 185 aa6.65□□□□□ -1.34
VPS33B-203ENST00000554264 TEKT1Q969V4 418 aa6.65□□□□□ -1.34
VPS33B-203ENST00000554264 SHDQ96IW2 340 aa6.65□□□□□ -1.34
VPS33B-203ENST00000554264 SEC16BQ96JE7 1060 aa6.65□□□□□ -1.34
VPS33B-203ENST00000554264 COX4I2Q96KJ9 171 aa6.65□□□□□ -1.34
VPS33B-203ENST00000554264 ZNF512BQ96KM6 892 aaPredicted RBP6.65□□□□□ -1.34
VPS33B-203ENST00000554264 PPP1R13BQ96KQ4 1090 aa6.65□□□□□ -1.34
VPS33B-203ENST00000554264 USP28Q96RU2 1077 aa6.65□□□□□ -1.34
VPS33B-203ENST00000554264 PARK7Q99497 189 aaKnown RBP6.65□□□□□ -1.34
VPS33B-203ENST00000554264 DNAJC2Q99543 621 aaKnown RBP6.65□□□□□ -1.34
VPS33B-203ENST00000554264 ZNF341Q9BYN7 854 aa6.65□□□□□ -1.34
VPS33B-203ENST00000554264 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.65□□□□□ -1.34
VPS33B-203ENST00000554264 CNNM1Q9NRU3 951 aa6.65□□□□□ -1.34
VPS33B-203ENST00000554264 PSD3Q9NYI0 1048 aa6.65□□□□□ -1.34
VPS33B-203ENST00000554264 ZSWIM5Q9P217 1185 aa6.65□□□□□ -1.34
VPS33B-203ENST00000554264 NRBP1Q9UHY1 535 aa6.65□□□□□ -1.34
VPS33B-203ENST00000554264 CPA4Q9UI42 421 aa6.65□□□□□ -1.34
VPS33B-203ENST00000554264 TUBE1Q9UJT0 475 aa6.65□□□□□ -1.34
VPS33B-203ENST00000554264 ADAMTS6Q9UKP5 1117 aa6.65□□□□□ -1.34
VPS33B-203ENST00000554264 ZHX1Q9UKY1 873 aaPredicted RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms