RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 LINC01565O15544 149 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 FGF18O76093 207 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 PRKCBP05771 671 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 IFNAR1P17181 557 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 DDIT3P35638 169 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 STAT6P42226 847 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 PHKA2P46019 1235 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 RGS19P49795 217 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 AFF1P51825 1210 aaKnown RBP2.76□□□□□ -1.97
PRPF39-205ENST00000554081 PSMC5P62195 406 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 LRMPQ12912 555 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 DMP1Q13316 513 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-205ENST00000554081 PRPF4BQ13523 1007 aaKnown RBP2.76□□□□□ -1.97
PRPF39-205ENST00000554081 TFDP1Q14186 410 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 BECN1Q14457 450 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 MGAT5BQ3V5L5 792 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 XKR3Q5GH77 459 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 EARS2Q5JPH6 523 aaKnown RBP2.76□□□□□ -1.97
PRPF39-205ENST00000554081 ATAT1Q5SQI0 421 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 ZFYVE27Q5T4F4 411 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 RRAGBQ5VZM2 374 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 PCNX4Q63HM2 1172 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 ARMCX5Q6P1M9 558 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 CNKSR3Q6P9H4 555 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 PADI6Q6TGC4 694 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 MTHFD1LQ6UB35 978 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 PRSS55Q6UWB4 352 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-205ENST00000554081 METTL16Q86W50 562 aaKnown RBP2.76□□□□□ -1.97
PRPF39-205ENST00000554081 CEP120Q8N960 986 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 CNNM3Q8NE01 707 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 STKLD1Q8NE28 680 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 CAGE1Q8TC20 777 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 ATP8B4Q8TF62 1192 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 USP6NLQ92738 828 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 EIF2AK1Q9BQI3 630 aaKnown RBP2.76□□□□□ -1.97
PRPF39-205ENST00000554081 TSEN34Q9BSV6 310 aaKnown RBP2.76□□□□□ -1.97
PRPF39-205ENST00000554081 C11orf84Q9BUA3 381 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-205ENST00000554081 RNF26Q9BY78 433 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-205ENST00000554081 GLT8D2Q9H1C3 349 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 TMEM60Q9H2L4 133 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 AGO4Q9HCK5 861 aaKnown RBP2.76□□□□□ -1.97
PRPF39-205ENST00000554081 PRM3Q9NNZ6 103 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 DACT1Q9NYF0 836 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 COX16Q9P0S2 106 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 TBX21Q9UL17 535 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 CA14Q9ULX7 337 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 DDX60Q8IY21 1712 aaKnown RBP2.76□□□□□ -1.97
PRPF39-205ENST00000554081 WDR19Q8NEZ3 1342 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 CNTNAP5Q8WYK1 1306 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 TNRC18O15417 2968 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-205ENST00000554081 ABHD14A-ACY1A0A1B0GW23 586 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 LINC01553A4QN01 128 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 FAM47DPA6NHR8 397 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 GOLGA8CPA6NN73 597 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 SPATA31C2B4DYI2 1134 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 F8W810 466 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 ENPP3O14638 875 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 OPLAHO14841 1288 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 CCL16O15467 120 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 PRPF3O43395 683 aaKnown RBP2.76□□□□□ -1.97
PRPF39-205ENST00000554081 DKC1O60832 514 aaKnown RBP eCLIP2.76□□□□□ -1.979e-9■■■■□ 19.9
PRPF39-205ENST00000554081 CHRNA1P02708 482 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 P4HBP07237 508 aaKnown RBP2.76□□□□□ -1.97
PRPF39-205ENST00000554081 PDGFRBP09619 1106 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 OR52Z1P0C646 297 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 COL9A1P20849 921 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 NMT1P30419 496 aaKnown RBP2.76□□□□□ -1.97
PRPF39-205ENST00000554081 BRCC3P46736 316 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 RP1P56715 2156 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 TAP1Q03518 808 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 DLX2Q07687 328 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-205ENST00000554081 GOLGA8FQ08AF8 430 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 GOLGA8DPQ0D2H9 430 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 TOB2Q14106 344 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-205ENST00000554081 MCM6Q14566 821 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 EMC2Q15006 297 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 CAMK4Q16566 473 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 SDHAF4Q5VUM1 108 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 IQCEQ6IPM2 695 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 KCNT2Q6UVM3 1135 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 MAMDC4Q6UXC1 1216 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 ZNF354CQ86Y25 554 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 FAM178BQ8IXR5 827 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 YAF2Q8IY57 180 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 KCNV2Q8TDN2 545 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 TMEM40Q8WWA1 233 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 SMG7Q92540 1137 aaKnown RBP2.76□□□□□ -1.97
PRPF39-205ENST00000554081 HPS3Q969F9 1004 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 GPRASP2Q96D09 838 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 SAAL1Q96ER3 474 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 ZBTB45Q96K62 511 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-205ENST00000554081 FGD4Q96M96 766 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 GUCD1Q96NT3 240 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 INPP4AQ96PE3 977 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-205ENST00000554081 TRPM7Q96QT4 1865 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 FNBP1Q96RU3 617 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 CORO1BQ9BR76 489 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 CCDC94Q9BW85 323 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-205ENST00000554081 NXF3Q9H4D5 531 aaKnown RBP2.76□□□□□ -1.97
PRPF39-205ENST00000554081 ZDHHC4Q9NPG8 344 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms