RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 BMP2KQ9NSY1 1161 aaPredicted RBP9.89□□□□□ -0.83
TDP1-208ENST00000553989 FAM105AQ9NUU6 356 aa9.89□□□□□ -0.83
TDP1-208ENST00000553989 TBC1D13Q9NVG8 400 aa9.89□□□□□ -0.83
TDP1-208ENST00000553989 DDX25Q9UHL0 483 aaKnown RBP9.89□□□□□ -0.83
TDP1-208ENST00000553989 PCDHA4Q9UN74 947 aa9.89□□□□□ -0.83
TDP1-208ENST00000553989 KMT2EQ8IZD2 1858 aa9.89□□□□□ -0.83
TDP1-208ENST00000553989 EPB41L2O43491 1005 aaKnown RBP9.88□□□□□ -0.83
TDP1-208ENST00000553989 MARCH6O60337 910 aa9.88□□□□□ -0.83
TDP1-208ENST00000553989 PSMD10O75832 226 aa9.88□□□□□ -0.83
TDP1-208ENST00000553989 DEXIO95424 95 aa9.88□□□□□ -0.83
TDP1-208ENST00000553989 BRD1O95696 1058 aa9.88□□□□□ -0.83
TDP1-208ENST00000553989 ASGR2P07307 311 aa9.88□□□□□ -0.83
TDP1-208ENST00000553989 CTSAP10619 480 aa9.88□□□□□ -0.83
TDP1-208ENST00000553989 EPCAMP16422 314 aa9.88□□□□□ -0.83
TDP1-208ENST00000553989 PDIA3P30101 505 aaKnown RBP9.88□□□□□ -0.83
TDP1-208ENST00000553989 POLGP54098 1239 aaPredicted RBP9.88□□□□□ -0.83
TDP1-208ENST00000553989 PSMC5P62195 406 aa9.88□□□□□ -0.83
TDP1-208ENST00000553989 NUCB2P80303 420 aa9.88□□□□□ -0.83
TDP1-208ENST00000553989 STK3Q13188 491 aa9.88□□□□□ -0.83
TDP1-208ENST00000553989 NONOQ15233 471 aaKnown RBP eCLIP9.88□□□□□ -0.83
TDP1-208ENST00000553989 TARBP2Q15633 366 aaKnown RBP9.88□□□□□ -0.83
TDP1-208ENST00000553989 INF2Q27J81 1249 aa9.88□□□□□ -0.83
TDP1-208ENST00000553989 LETM2Q2VYF4 491 aa9.88□□□□□ -0.83
TDP1-208ENST00000553989 KIAA1841Q6NSI8 718 aa9.88□□□□□ -0.83
TDP1-208ENST00000553989 TMC5Q6UXY8 1006 aa9.88□□□□□ -0.83
TDP1-208ENST00000553989 DDX53Q86TM3 631 aaKnown RBP9.88□□□□□ -0.83
TDP1-208ENST00000553989 PPFIBP1Q86W92 1011 aa9.88□□□□□ -0.83
TDP1-208ENST00000553989 KSR1Q8IVT5 923 aa9.88□□□□□ -0.83
TDP1-208ENST00000553989 BLIDQ8IZY5 108 aa9.88□□□□□ -0.83
TDP1-208ENST00000553989 SLC7A3Q8WY07 619 aa9.88□□□□□ -0.83
TDP1-208ENST00000553989 KCNB2Q92953 911 aa9.88□□□□□ -0.83
TDP1-208ENST00000553989 IGSF21Q96ID5 467 aa9.88□□□□□ -0.83
TDP1-208ENST00000553989 EMILIN2Q9BXX0 1053 aa9.88□□□□□ -0.83
TDP1-208ENST00000553989 NRDE2Q9H7Z3 1164 aa9.88□□□□□ -0.83
TDP1-208ENST00000553989 LIMD1Q9UGP4 676 aa9.88□□□□□ -0.83
TDP1-208ENST00000553989 ZDBF2Q9HCK1 2354 aa9.88□□□□□ -0.83
TDP1-208ENST00000553989 CCDC194A0A1B0GVG4 234 aa9.87□□□□□ -0.83
TDP1-208ENST00000553989 MEIS3P2A8K0S8 358 aa9.87□□□□□ -0.83
TDP1-208ENST00000553989 DKC1O60832 514 aaKnown RBP eCLIP9.87□□□□□ -0.83
TDP1-208ENST00000553989 MAFO75444 373 aaPredicted RBP9.87□□□□□ -0.83
TDP1-208ENST00000553989 GALTP07902 379 aa9.87□□□□□ -0.83
TDP1-208ENST00000553989 KLRC2P26717 231 aa9.87□□□□□ -0.83
TDP1-208ENST00000553989 SLC11A1P49279 550 aa9.87□□□□□ -0.83
TDP1-208ENST00000553989 KANK3Q6NY19 840 aa9.87□□□□□ -0.83
TDP1-208ENST00000553989 CCDC149Q6ZUS6 474 aa9.87□□□□□ -0.83
TDP1-208ENST00000553989 RUFY3Q7L099 469 aa9.87□□□□□ -0.83
TDP1-208ENST00000553989 KRT25Q7Z3Z0 450 aa9.87□□□□□ -0.83
TDP1-208ENST00000553989 FBXL16Q8N461 479 aa9.87□□□□□ -0.83
TDP1-208ENST00000553989 ACSF2Q96CM8 615 aaPredicted RBP9.87□□□□□ -0.83
TDP1-208ENST00000553989 CEP170P1Q96L14 293 aa9.87□□□□□ -0.83
TDP1-208ENST00000553989 AGXT2Q9BYV1 514 aa9.87□□□□□ -0.83
TDP1-208ENST00000553989 SMOC2Q9H3U7 446 aa9.87□□□□□ -0.83
TDP1-208ENST00000553989 SFXN1Q9H9B4 322 aa9.87□□□□□ -0.83
TDP1-208ENST00000553989 RSAD1Q9HA92 442 aa9.87□□□□□ -0.83
TDP1-208ENST00000553989 CYP26B1Q9NR63 512 aa9.87□□□□□ -0.83
TDP1-208ENST00000553989 DNAJB4Q9UDY4 337 aa9.87□□□□□ -0.83
TDP1-208ENST00000553989 PCDHB2Q9Y5E7 798 aa9.87□□□□□ -0.83
TDP1-208ENST00000553989 COL4A3BPQ9Y5P4 624 aa9.87□□□□□ -0.83
TDP1-208ENST00000553989 WDFY4Q6ZS81 3184 aa9.86□□□□□ -0.83
TDP1-208ENST00000553989 WDR81Q562E7 1941 aa9.86□□□□□ -0.83
TDP1-208ENST00000553989 IGKV6-21A0A0C4DH24 114 aa9.86□□□□□ -0.83
TDP1-208ENST00000553989 C2CD2LO14523 706 aa9.86□□□□□ -0.83
TDP1-208ENST00000553989 DPYSL4O14531 572 aa9.86□□□□□ -0.83
TDP1-208ENST00000553989 GALR2O43603 387 aaPredicted RBP9.86□□□□□ -0.83
TDP1-208ENST00000553989 SLC37A4O43826 429 aa9.86□□□□□ -0.83
TDP1-208ENST00000553989 EDIL3O43854 480 aa9.86□□□□□ -0.83
TDP1-208ENST00000553989 OFD1O75665 1012 aa9.86□□□□□ -0.83
TDP1-208ENST00000553989 ERLIN2O94905 339 aa9.86□□□□□ -0.83
TDP1-208ENST00000553989 POMCP01189 267 aa9.86□□□□□ -0.83
TDP1-208ENST00000553989 URODP06132 367 aa9.86□□□□□ -0.83
TDP1-208ENST00000553989 SRGAP2CP0DJJ0 459 aa9.86□□□□□ -0.83
TDP1-208ENST00000553989 RFX1P22670 979 aa9.86□□□□□ -0.83
TDP1-208ENST00000553989 QARSP47897 775 aaKnown RBP9.86□□□□□ -0.83
TDP1-208ENST00000553989 MCM2P49736 904 aa9.86□□□□□ -0.83
TDP1-208ENST00000553989 NPEPPSP55786 919 aa9.86□□□□□ -0.83
TDP1-208ENST00000553989 DSG2Q14126 1118 aa9.86□□□□□ -0.83
TDP1-208ENST00000553989 PTPN14Q15678 1187 aa9.86□□□□□ -0.83
TDP1-208ENST00000553989 GALNT17Q6IS24 598 aa9.86□□□□□ -0.83
TDP1-208ENST00000553989 MOXD1Q6UVY6 613 aa9.86□□□□□ -0.83
TDP1-208ENST00000553989 ANO5Q75V66 913 aa9.86□□□□□ -0.83
TDP1-208ENST00000553989 EXOC8Q8IYI6 725 aa9.86□□□□□ -0.83
TDP1-208ENST00000553989 ZDHHC14Q8IZN3 488 aa9.86□□□□□ -0.83
TDP1-208ENST00000553989 FLCNQ8NFG4 579 aa9.86□□□□□ -0.83
TDP1-208ENST00000553989 ETNPPLQ8TBG4 499 aa9.86□□□□□ -0.83
TDP1-208ENST00000553989 BCL7CQ8WUZ0 217 aaPredicted RBP9.86□□□□□ -0.83
TDP1-208ENST00000553989 PSPC1Q8WXF1 523 aaKnown RBP9.86□□□□□ -0.83
TDP1-208ENST00000553989 TMEM143Q96AN5 459 aa9.86□□□□□ -0.83
TDP1-208ENST00000553989 CCDC43Q96MW1 224 aaKnown RBP9.86□□□□□ -0.83
TDP1-208ENST00000553989 AIFM3Q96NN9 605 aa9.86□□□□□ -0.83
TDP1-208ENST00000553989 TRAIPQ9BWF2 469 aa9.86□□□□□ -0.83
TDP1-208ENST00000553989 MRPL17Q9NRX2 175 aaKnown RBP9.86□□□□□ -0.83
TDP1-208ENST00000553989 AGPAT5Q9NUQ2 364 aa9.86□□□□□ -0.83
TDP1-208ENST00000553989 STK39Q9UEW8 545 aa9.86□□□□□ -0.83
TDP1-208ENST00000553989 FBXL21Q9UKT6 434 aa9.86□□□□□ -0.83
TDP1-208ENST00000553989 FAN1Q9Y2M0 1017 aa9.86□□□□□ -0.83
TDP1-208ENST00000553989 PRG3Q9Y2Y8 225 aaPredicted RBP9.86□□□□□ -0.83
TDP1-208ENST00000553989 IRAK3Q9Y616 596 aa9.86□□□□□ -0.83
TDP1-208ENST00000553989 CYP46A1Q9Y6A2 500 aa9.86□□□□□ -0.83
TDP1-208ENST00000553989 CNTNAP2Q9UHC6 1331 aa9.85□□□□□ -0.83
TDP1-208ENST00000553989 CYP3A7-CYP3A51PA0A087WV96 503 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms