RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 FDXACB1Q9BRP7 624 aaPredicted RBP15.91■□□□□ 0.14
SHMT2-210ENST00000553950 FGFBP2Q9BYJ0 223 aa15.91■□□□□ 0.14
SHMT2-210ENST00000553950 CELF4Q9BZC1 486 aaKnown RBP15.91■□□□□ 0.14
SHMT2-210ENST00000553950 KCTD10Q9H3F6 313 aa15.91■□□□□ 0.14
SHMT2-210ENST00000553950 IFT122Q9HBG6 1241 aa15.91■□□□□ 0.14
SHMT2-210ENST00000553950 POLD4Q9HCU8 107 aa15.91■□□□□ 0.14
SHMT2-210ENST00000553950 TRMT13Q9NUP7 481 aaKnown RBP15.91■□□□□ 0.14
SHMT2-210ENST00000553950 MAPK8IP1Q9UQF2 711 aa15.91■□□□□ 0.14
SHMT2-210ENST00000553950 SQORQ9Y6N5 450 aa15.91■□□□□ 0.14
SHMT2-210ENST00000553950 CNTNAP2Q9UHC6 1331 aa15.91■□□□□ 0.14
SHMT2-210ENST00000553950 RALGAPA2Q2PPJ7 1873 aa15.91■□□□□ 0.14
SHMT2-210ENST00000553950 ACKR2O00590 384 aa15.9■□□□□ 0.14
SHMT2-210ENST00000553950 GPR32O75388 356 aa15.9■□□□□ 0.14
SHMT2-210ENST00000553950 DARSP14868 501 aaKnown RBP15.9■□□□□ 0.14
SHMT2-210ENST00000553950 EIF4BP23588 611 aaKnown RBP15.9■□□□□ 0.14
SHMT2-210ENST00000553950 AXLP30530 894 aa15.9■□□□□ 0.14
SHMT2-210ENST00000553950 THPOP40225 353 aa15.9■□□□□ 0.14
SHMT2-210ENST00000553950 MNX1P50219 401 aaPredicted RBP15.9■□□□□ 0.14
SHMT2-210ENST00000553950 FKBP3Q00688 224 aaKnown RBP15.9■□□□□ 0.14
SHMT2-210ENST00000553950 SPAG1Q07617 926 aa15.9■□□□□ 0.14
SHMT2-210ENST00000553950 TMEM132AQ24JP5 1023 aa15.9■□□□□ 0.14
SHMT2-210ENST00000553950 ZCWPW2Q504Y3 356 aa15.9■□□□□ 0.14
SHMT2-210ENST00000553950 FAM26DQ5JW98 314 aa15.9■□□□□ 0.14
SHMT2-210ENST00000553950 SPATA1Q5VX52 437 aa15.9■□□□□ 0.14
SHMT2-210ENST00000553950 TTI2Q6NXR4 508 aa15.9■□□□□ 0.14
SHMT2-210ENST00000553950 KSR1Q8IVT5 923 aa15.9■□□□□ 0.14
SHMT2-210ENST00000553950 GLIS3Q8NEA6 775 aa15.9■□□□□ 0.14
SHMT2-210ENST00000553950 ANKRD20A12PQ8NF67 263 aa15.9■□□□□ 0.14
SHMT2-210ENST00000553950 CCDC51Q96ER9 411 aa15.9■□□□□ 0.14
SHMT2-210ENST00000553950 CEP63Q96MT8 703 aa15.9■□□□□ 0.14
SHMT2-210ENST00000553950 ADAMTS10Q9H324 1103 aa15.9■□□□□ 0.14
SHMT2-210ENST00000553950 FZD8Q9H461 694 aa15.9■□□□□ 0.14
SHMT2-210ENST00000553950 CBX8Q9HC52 389 aa15.9■□□□□ 0.14
SHMT2-210ENST00000553950 CDY2AQ9Y6F7 541 aa15.9■□□□□ 0.14
SHMT2-210ENST00000553950 PQBP1O60828 265 aaKnown RBP15.89■□□□□ 0.13
SHMT2-210ENST00000553950 GNA14O95837 355 aa15.89■□□□□ 0.13
SHMT2-210ENST00000553950 CD4P01730 458 aa15.89■□□□□ 0.13
SHMT2-210ENST00000553950 GARTP22102 1010 aa15.89■□□□□ 0.13
SHMT2-210ENST00000553950 PRPF4BQ13523 1007 aaKnown RBP15.89■□□□□ 0.13
SHMT2-210ENST00000553950 ARMCX5Q6P1M9 558 aa15.89■□□□□ 0.13
SHMT2-210ENST00000553950 SLC9A9Q8IVB4 645 aa15.89■□□□□ 0.13
SHMT2-210ENST00000553950 CSGALNACT2Q8N6G5 542 aa15.89■□□□□ 0.13
SHMT2-210ENST00000553950 PPP1R13LQ8WUF5 828 aa15.89■□□□□ 0.13
SHMT2-210ENST00000553950 PAWRQ96IZ0 340 aaKnown RBP15.89■□□□□ 0.13
SHMT2-210ENST00000553950 CTAGE1Q96RT6 745 aa15.89■□□□□ 0.13
SHMT2-210ENST00000553950 OSMRQ99650 979 aa15.89■□□□□ 0.13
SHMT2-210ENST00000553950 THAP9Q9H5L6 903 aa15.89■□□□□ 0.13
SHMT2-210ENST00000553950 AGPAT3Q9NRZ7 376 aa15.89■□□□□ 0.13
SHMT2-210ENST00000553950 GINS2Q9Y248 185 aa15.89■□□□□ 0.13
SHMT2-210ENST00000553950 N4BP3O15049 544 aa15.88■□□□□ 0.13
SHMT2-210ENST00000553950 CETN3O15182 167 aa15.88■□□□□ 0.13
SHMT2-210ENST00000553950 SLC16A3O15427 465 aaKnown RBP15.88■□□□□ 0.13
SHMT2-210ENST00000553950 TOM1L1O75674 476 aa15.88■□□□□ 0.13
SHMT2-210ENST00000553950 NR2F2P24468 414 aa15.88■□□□□ 0.13
SHMT2-210ENST00000553950 MGAT3Q09327 533 aa15.88■□□□□ 0.13
SHMT2-210ENST00000553950 KYAT1Q16773 422 aa15.88■□□□□ 0.13
SHMT2-210ENST00000553950 TRIM71Q2Q1W2 868 aaKnown RBP15.88■□□□□ 0.13
SHMT2-210ENST00000553950 CATSPER4Q7RTX7 472 aa15.88■□□□□ 0.13
SHMT2-210ENST00000553950 DIS3LQ8TF46 1054 aaKnown RBP15.88■□□□□ 0.13
SHMT2-210ENST00000553950 ADPGKQ9BRR6 497 aa15.88■□□□□ 0.13
SHMT2-210ENST00000553950 MKNK1Q9BUB5 465 aa15.88■□□□□ 0.13
SHMT2-210ENST00000553950 TRPV6Q9H1D0 765 aa15.88■□□□□ 0.13
SHMT2-210ENST00000553950 KIAA1586Q9HCI6 787 aa15.88■□□□□ 0.13
SHMT2-210ENST00000553950 MAGEC2Q9UBF1 373 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-210ENST00000553950 NFE2L3Q9Y4A8 694 aa15.88■□□□□ 0.13
SHMT2-210ENST00000553950 CITO14578 2027 aa15.88■□□□□ 0.13
SHMT2-210ENST00000553950 GOLGA6L3A6NEY3 463 aa15.87■□□□□ 0.13
SHMT2-210ENST00000553950 GPR182O15218 404 aa15.87■□□□□ 0.13
SHMT2-210ENST00000553950 LDHAP00338 332 aaKnown RBP15.87■□□□□ 0.13
SHMT2-210ENST00000553950 NR3C1P04150 777 aa15.87■□□□□ 0.13
SHMT2-210ENST00000553950 TPM2P07951 284 aa15.87■□□□□ 0.13
SHMT2-210ENST00000553950 CTSHP09668 335 aa15.87■□□□□ 0.13
SHMT2-210ENST00000553950 CKBP12277 381 aa15.87■□□□□ 0.13
SHMT2-210ENST00000553950 PRKCSHP14314 528 aaPredicted RBP15.87■□□□□ 0.13
SHMT2-210ENST00000553950 SELPP16109 830 aa15.87■□□□□ 0.13
SHMT2-210ENST00000553950 ATN1P54259 1190 aaPredicted RBP15.87■□□□□ 0.13
SHMT2-210ENST00000553950 STX17P56962 302 aa15.87■□□□□ 0.13
SHMT2-210ENST00000553950 TMEM62Q0P6H9 643 aa15.87■□□□□ 0.13
SHMT2-210ENST00000553950 IQCB1Q15051 598 aa15.87■□□□□ 0.13
SHMT2-210ENST00000553950 DCAF4L1Q3SXM0 396 aa15.87■□□□□ 0.13
SHMT2-210ENST00000553950 TRIM60Q495X7 471 aa15.87■□□□□ 0.13
SHMT2-210ENST00000553950 ATF7IP2Q5U623 682 aa15.87■□□□□ 0.13
SHMT2-210ENST00000553950 NOTUMQ6P988 496 aa15.87■□□□□ 0.13
SHMT2-210ENST00000553950 TSHZ1Q6ZSZ6 1077 aa15.87■□□□□ 0.13
SHMT2-210ENST00000553950 LRRC8DQ7L1W4 858 aa15.87■□□□□ 0.13
SHMT2-210ENST00000553950 TAS1R3Q7RTX0 852 aa15.87■□□□□ 0.13
SHMT2-210ENST00000553950 USP37Q86T82 979 aa15.87■□□□□ 0.13
SHMT2-210ENST00000553950 DHX40Q8IX18 779 aaKnown RBP15.87■□□□□ 0.13
SHMT2-210ENST00000553950 ZC3H3Q8IXZ2 948 aaKnown RBP15.87■□□□□ 0.13
SHMT2-210ENST00000553950 POMGNT1Q8WZA1 660 aa15.87■□□□□ 0.13
SHMT2-210ENST00000553950 DHX38Q92620 1227 aaKnown RBP15.87■□□□□ 0.13
SHMT2-210ENST00000553950 PPP1R16BQ96T49 567 aa15.87■□□□□ 0.13
SHMT2-210ENST00000553950 SEMA6BQ9H3T3 888 aa15.87■□□□□ 0.13
SHMT2-210ENST00000553950 FRMD4BQ9Y2L6 1034 aa15.87■□□□□ 0.13
SHMT2-210ENST00000553950 ALPK3Q96L96 1907 aa15.86■□□□□ 0.13
SHMT2-210ENST00000553950 TRIM49BA6NDI0 452 aa15.86■□□□□ 0.13
SHMT2-210ENST00000553950 TGFB1I1O43294 461 aa15.86■□□□□ 0.13
SHMT2-210ENST00000553950 RPS6KA5O75582 802 aa15.86■□□□□ 0.13
SHMT2-210ENST00000553950 CLTBP09497 229 aa15.86■□□□□ 0.13
SHMT2-210ENST00000553950 EPB41P11171 864 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms